RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 TFRCP02786 760 aaKnown RBP19.03■□□□□ 0.64
SMPD4-220ENST00000491319 CYP2B6P20813 491 aa19.03■□□□□ 0.64
SMPD4-220ENST00000491319 ERVK-9P63128 1117 aa19.03■□□□□ 0.64
SMPD4-220ENST00000491319 ERVK-24P63145 666 aa19.03■□□□□ 0.64
SMPD4-220ENST00000491319 GABPAQ06546 454 aa19.03■□□□□ 0.64
SMPD4-220ENST00000491319 SLFNL1Q499Z3 407 aa19.03■□□□□ 0.64
SMPD4-220ENST00000491319 ACER1Q8TDN7 264 aa19.03■□□□□ 0.64
SMPD4-220ENST00000491319 TRIB2Q92519 343 aa19.03■□□□□ 0.64
SMPD4-220ENST00000491319 CRISPLD2Q9H0B8 497 aa19.03■□□□□ 0.64
SMPD4-220ENST00000491319 PORCNQ9H237 461 aa19.03■□□□□ 0.64
SMPD4-220ENST00000491319 BOLA2Q9H3K6 86 aa19.03■□□□□ 0.64
SMPD4-220ENST00000491319 CHMP4BQ9H444 224 aaKnown RBP19.03■□□□□ 0.64
SMPD4-220ENST00000491319 PAG1Q9NWQ8 432 aa19.03■□□□□ 0.64
SMPD4-220ENST00000491319 MCM9Q9NXL9 1143 aa19.03■□□□□ 0.64
SMPD4-220ENST00000491319 GUCY1A2P33402 732 aa19.02■□□□□ 0.64
SMPD4-220ENST00000491319 Q3C1V9 767 aa19.02■□□□□ 0.64
SMPD4-220ENST00000491319 GTF3C2Q8WUA4 911 aaPredicted RBP19.02■□□□□ 0.64
SMPD4-220ENST00000491319 KIAA1683Q9H0B3 1180 aa19.02■□□□□ 0.64
SMPD4-220ENST00000491319 ARMT1Q9H993 441 aa19.02■□□□□ 0.64
SMPD4-220ENST00000491319 CABP5Q9NP86 173 aa19.02■□□□□ 0.64
SMPD4-220ENST00000491319 DCP1AQ9NPI6 582 aaPredicted RBP19.02■□□□□ 0.64
SMPD4-220ENST00000491319 PCDH10Q9P2E7 1040 aa19.02■□□□□ 0.64
SMPD4-220ENST00000491319 COL11A1P12107 1806 aaPredicted RBP19.02■□□□□ 0.63
SMPD4-220ENST00000491319 CYP2D6P10635 497 aa19.01■□□□□ 0.63
SMPD4-220ENST00000491319 ATP5JP18859 108 aa19.01■□□□□ 0.63
SMPD4-220ENST00000491319 VCAM1P19320 739 aa19.01■□□□□ 0.63
SMPD4-220ENST00000491319 MAPK4P31152 587 aa19.01■□□□□ 0.63
SMPD4-220ENST00000491319 FXR1P51114 621 aaKnown RBP eCLIP19.01■□□□□ 0.63
SMPD4-220ENST00000491319 USP14P54578 494 aa19.01■□□□□ 0.63
SMPD4-220ENST00000491319 SOCS4Q8WXH5 440 aa19.01■□□□□ 0.63
SMPD4-220ENST00000491319 NUDT12Q9BQG2 462 aa19.01■□□□□ 0.63
SMPD4-220ENST00000491319 RPTORQ8N122 1335 aa19■□□□□ 0.63
SMPD4-220ENST00000491319 USP17L15C9J2P7 530 aa19■□□□□ 0.63
SMPD4-220ENST00000491319 USP17L13C9JLJ4 530 aa19■□□□□ 0.63
SMPD4-220ENST00000491319 USP17L11C9JVI0 530 aa19■□□□□ 0.63
SMPD4-220ENST00000491319 USP17L18D6R9N7 530 aa19■□□□□ 0.63
SMPD4-220ENST00000491319 USP17L22D6RA61 530 aa19■□□□□ 0.63
SMPD4-220ENST00000491319 USP17L17D6RBQ6 530 aa19■□□□□ 0.63
SMPD4-220ENST00000491319 USP17L19D6RCP7 530 aa19■□□□□ 0.63
SMPD4-220ENST00000491319 USP17L20D6RJB6 530 aa19■□□□□ 0.63
SMPD4-220ENST00000491319 CNMDO75829 334 aa19■□□□□ 0.63
SMPD4-220ENST00000491319 MBD4O95243 580 aa19■□□□□ 0.63
SMPD4-220ENST00000491319 CHGBP05060 677 aa19■□□□□ 0.63
SMPD4-220ENST00000491319 ADD2P35612 726 aa19■□□□□ 0.63
SMPD4-220ENST00000491319 USP17L24Q0WX57 530 aa19■□□□□ 0.63
SMPD4-220ENST00000491319 PDE3AQ14432 1141 aa19■□□□□ 0.63
SMPD4-220ENST00000491319 SEPT2Q15019 361 aa19■□□□□ 0.63
SMPD4-220ENST00000491319 CHRDL2Q6WN34 429 aa19■□□□□ 0.63
SMPD4-220ENST00000491319 GPR142Q7Z601 462 aa19■□□□□ 0.63
SMPD4-220ENST00000491319 SLC44A5Q8NCS7 719 aa19■□□□□ 0.63
SMPD4-220ENST00000491319 DIS3LQ8TF46 1054 aaKnown RBP19■□□□□ 0.63
SMPD4-220ENST00000491319 HAUS7Q99871 368 aa19■□□□□ 0.63
SMPD4-220ENST00000491319 MPHOSPH10O00566 681 aaKnown RBP18.99■□□□□ 0.63
SMPD4-220ENST00000491319 PRKAB2O43741 272 aa18.99■□□□□ 0.63
SMPD4-220ENST00000491319 SMARCA5O60264 1052 aaPredicted RBP18.99■□□□□ 0.63
SMPD4-220ENST00000491319 CATSPERGQ6ZRH7 1159 aa18.99■□□□□ 0.63
SMPD4-220ENST00000491319 CCAR1Q8IX12 1150 aaKnown RBP18.99■□□□□ 0.63
SMPD4-220ENST00000491319 PAWRQ96IZ0 340 aaKnown RBP18.99■□□□□ 0.63
SMPD4-220ENST00000491319 HMX1Q9NP08 348 aaPredicted RBP18.99■□□□□ 0.63
SMPD4-220ENST00000491319 GREB1LQ9C091 1923 aaPredicted RBP18.98■□□□□ 0.63
SMPD4-220ENST00000491319 ZNFX1Q9P2E3 1918 aaKnown RBP18.98■□□□□ 0.63
SMPD4-220ENST00000491319 ZNF236Q9UL36 1845 aa18.98■□□□□ 0.63
SMPD4-220ENST00000491319 XRCC5P13010 732 aaKnown RBP18.98■□□□□ 0.63
SMPD4-220ENST00000491319 PRKAR2AP13861 404 aaKnown RBP18.98■□□□□ 0.63
SMPD4-220ENST00000491319 MORN1Q5T089 497 aa18.98■□□□□ 0.63
SMPD4-220ENST00000491319 MAP3K21Q5TCX8 1036 aa18.98■□□□□ 0.63
SMPD4-220ENST00000491319 PLEKHH3Q7Z736 793 aa18.98■□□□□ 0.63
SMPD4-220ENST00000491319 USP6NLQ92738 828 aa18.98■□□□□ 0.63
SMPD4-220ENST00000491319 DYNLL2Q96FJ2 89 aa18.98■□□□□ 0.63
SMPD4-220ENST00000491319 LRRCC1Q9C099 1032 aa18.98■□□□□ 0.63
SMPD4-220ENST00000491319 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.98■□□□□ 0.632e-7■■■■□ 20.2
SMPD4-220ENST00000491319 RPAP3Q9H6T3 665 aaPredicted RBP18.98■□□□□ 0.63
SMPD4-220ENST00000491319 RABGAP1Q9Y3P9 1069 aa18.98■□□□□ 0.63
SMPD4-220ENST00000491319 A0A1W2PRG0 241 aa18.97■□□□□ 0.63
SMPD4-220ENST00000491319 SMIM22K7EJ46 135 aa18.97■□□□□ 0.63
SMPD4-220ENST00000491319 ZKSCAN1P17029 563 aaPredicted RBP18.97■□□□□ 0.63
SMPD4-220ENST00000491319 CAPN2P17655 700 aa18.97■□□□□ 0.63
SMPD4-220ENST00000491319 CCL14Q16627 93 aa18.97■□□□□ 0.63
SMPD4-220ENST00000491319 CLEC10AQ8IUN9 316 aa18.97■□□□□ 0.63
SMPD4-220ENST00000491319 RANBP2P49792 3224 aaKnown RBP18.96■□□□□ 0.63
SMPD4-220ENST00000491319 CYP2D7A0A087X1C5 515 aa18.96■□□□□ 0.63
SMPD4-220ENST00000491319 SPDYE16A6NNV3 312 aaPredicted RBP18.96■□□□□ 0.63
SMPD4-220ENST00000491319 RGS2P41220 211 aa18.96■□□□□ 0.63
SMPD4-220ENST00000491319 LBX2Q6XYB7 198 aa18.96■□□□□ 0.63
SMPD4-220ENST00000491319 APBA2Q99767 749 aa18.96■□□□□ 0.63
SMPD4-220ENST00000491319 CWC22Q9HCG8 908 aaKnown RBP18.96■□□□□ 0.63
SMPD4-220ENST00000491319 BTBD7Q9P203 1132 aa18.96■□□□□ 0.63
SMPD4-220ENST00000491319 RBM27Q9P2N5 1060 aaKnown RBP18.96■□□□□ 0.63
SMPD4-220ENST00000491319 NR2E3Q9Y5X4 410 aa18.96■□□□□ 0.63
SMPD4-220ENST00000491319 MYH4Q9Y623 1939 aa18.96■□□□□ 0.63
SMPD4-220ENST00000491319 EVI5O60447 810 aa18.95■□□□□ 0.62
SMPD4-220ENST00000491319 CCNA1P78396 465 aa18.95■□□□□ 0.62
SMPD4-220ENST00000491319 WDR78Q5VTH9 848 aa18.95■□□□□ 0.62
SMPD4-220ENST00000491319 TMEM179Q6ZVK1 233 aa18.95■□□□□ 0.62
SMPD4-220ENST00000491319 NECAB2Q7Z6G3 386 aa18.95■□□□□ 0.62
SMPD4-220ENST00000491319 ANKLE1Q8NAG6 615 aa18.95■□□□□ 0.62
SMPD4-220ENST00000491319 ATP8A2Q9NTI2 1148 aa18.95■□□□□ 0.62
SMPD4-220ENST00000491319 SWAP70Q9UH65 585 aa18.95■□□□□ 0.62
SMPD4-220ENST00000491319 AKR1B1P15121 316 aa18.94■□□□□ 0.62
SMPD4-220ENST00000491319 MNX1P50219 401 aaPredicted RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms