RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 PXYLP1Q8TE99 480 aa21.7■■□□□ 1.06
HMGN1-219ENST00000491183 YTHDC1Q96MU7 727 aaKnown RBP21.7■■□□□ 1.06
HMGN1-219ENST00000491183 CRBNQ96SW2 442 aa21.7■■□□□ 1.06
HMGN1-219ENST00000491183 FEZ1Q99689 392 aa21.7■■□□□ 1.06
HMGN1-219ENST00000491183 USP17L12C9JPN9 530 aa21.69■■□□□ 1.06
HMGN1-219ENST00000491183 USP17L21D6R901 530 aa21.69■■□□□ 1.06
HMGN1-219ENST00000491183 UBXN2AP68543 259 aa21.69■■□□□ 1.06
HMGN1-219ENST00000491183 C12orf60Q5U649 245 aa21.69■■□□□ 1.06
HMGN1-219ENST00000491183 KBTBD3Q8NAB2 608 aa21.69■■□□□ 1.06
HMGN1-219ENST00000491183 SHISA4Q96DD7 197 aa21.69■■□□□ 1.06
HMGN1-219ENST00000491183 SLC4A4Q9Y6R1 1079 aa21.69■■□□□ 1.06
HMGN1-219ENST00000491183 PLXNB2O15031 1838 aa21.69■■□□□ 1.06
HMGN1-219ENST00000491183 A0A1W2PRG0 241 aa21.68■■□□□ 1.06
HMGN1-219ENST00000491183 GJB1P08034 283 aa21.68■■□□□ 1.06
HMGN1-219ENST00000491183 USP14P54578 494 aa21.68■■□□□ 1.06
HMGN1-219ENST00000491183 GPRC5AQ8NFJ5 357 aa21.68■■□□□ 1.06
HMGN1-219ENST00000491183 GPATCH3Q96I76 525 aa21.68■■□□□ 1.06
HMGN1-219ENST00000491183 RNF208Q9H0X6 261 aa21.68■■□□□ 1.06
HMGN1-219ENST00000491183 UNC93B1Q9H1C4 597 aa21.68■■□□□ 1.06
HMGN1-219ENST00000491183 SWAP70Q9UH65 585 aa21.68■■□□□ 1.06
HMGN1-219ENST00000491183 USP17L15C9J2P7 530 aa21.67■■□□□ 1.06
HMGN1-219ENST00000491183 USP17L13C9JLJ4 530 aa21.67■■□□□ 1.06
HMGN1-219ENST00000491183 USP17L11C9JVI0 530 aa21.67■■□□□ 1.06
HMGN1-219ENST00000491183 USP17L18D6R9N7 530 aa21.67■■□□□ 1.06
HMGN1-219ENST00000491183 USP17L22D6RA61 530 aa21.67■■□□□ 1.06
HMGN1-219ENST00000491183 USP17L17D6RBQ6 530 aa21.67■■□□□ 1.06
HMGN1-219ENST00000491183 USP17L19D6RCP7 530 aa21.67■■□□□ 1.06
HMGN1-219ENST00000491183 USP17L20D6RJB6 530 aa21.67■■□□□ 1.06
HMGN1-219ENST00000491183 MPHOSPH10O00566 681 aaKnown RBP21.67■■□□□ 1.06
HMGN1-219ENST00000491183 INHAP05111 366 aa21.67■■□□□ 1.06
HMGN1-219ENST00000491183 VCAM1P19320 739 aa21.67■■□□□ 1.06
HMGN1-219ENST00000491183 GJA8P48165 433 aa21.67■■□□□ 1.06
HMGN1-219ENST00000491183 USP17L24Q0WX57 530 aa21.67■■□□□ 1.06
HMGN1-219ENST00000491183 CATSPERGQ6ZRH7 1159 aa21.67■■□□□ 1.06
HMGN1-219ENST00000491183 OTUD7AQ8TE49 926 aaPredicted RBP21.67■■□□□ 1.06
HMGN1-219ENST00000491183 STRBPQ96SI9 672 aaKnown RBP21.67■■□□□ 1.06
HMGN1-219ENST00000491183 TAOK2Q9UL54 1235 aa21.67■■□□□ 1.06
HMGN1-219ENST00000491183 CDK8P49336 464 aa21.66■■□□□ 1.06
HMGN1-219ENST00000491183 CTR9Q6PD62 1173 aa21.66■■□□□ 1.06
HMGN1-219ENST00000491183 SIAH1Q8IUQ4 282 aa21.66■■□□□ 1.06
HMGN1-219ENST00000491183 OSBP2Q969R2 916 aa21.66■■□□□ 1.06
HMGN1-219ENST00000491183 MYH8P13535 1937 aa21.66■■□□□ 1.06
HMGN1-219ENST00000491183 CNMDO75829 334 aa21.65■■□□□ 1.06
HMGN1-219ENST00000491183 AKR1B1P15121 316 aa21.65■■□□□ 1.06
HMGN1-219ENST00000491183 ERVK-9P63128 1117 aa21.65■■□□□ 1.06
HMGN1-219ENST00000491183 ERVK-24P63145 666 aa21.65■■□□□ 1.06
HMGN1-219ENST00000491183 TMEM179Q6ZVK1 233 aa21.65■■□□□ 1.06
HMGN1-219ENST00000491183 PI4K2BQ8TCG2 481 aa21.65■■□□□ 1.06
HMGN1-219ENST00000491183 PAGR1Q9BTK6 254 aa21.65■■□□□ 1.06
HMGN1-219ENST00000491183 PORCNQ9H237 461 aa21.65■■□□□ 1.06
HMGN1-219ENST00000491183 TTC41PQ6P2S7 1318 aa21.64■■□□□ 1.05
HMGN1-219ENST00000491183 RNF113AO15541 343 aaKnown RBP21.64■■□□□ 1.05
HMGN1-219ENST00000491183 C16orf86Q6ZW13 317 aa21.64■■□□□ 1.05
HMGN1-219ENST00000491183 NKX2-3Q8TAU0 364 aa21.64■■□□□ 1.05
HMGN1-219ENST00000491183 GTF3C2Q8WUA4 911 aaPredicted RBP21.64■■□□□ 1.05
HMGN1-219ENST00000491183 APPBP2Q92624 585 aa21.64■■□□□ 1.05
HMGN1-219ENST00000491183 RPAP3Q9H6T3 665 aaPredicted RBP21.64■■□□□ 1.05
HMGN1-219ENST00000491183 GSG1L2A8MUP6 293 aa21.63■■□□□ 1.05
HMGN1-219ENST00000491183 KIAA1755Q5JYT7 1200 aa21.63■■□□□ 1.05
HMGN1-219ENST00000491183 CLEC10AQ8IUN9 316 aa21.63■■□□□ 1.05
HMGN1-219ENST00000491183 U2AF1L4Q8WU68 220 aaKnown RBP21.63■■□□□ 1.05
HMGN1-219ENST00000491183 DDRGK1Q96HY6 314 aa21.63■■□□□ 1.05
HMGN1-219ENST00000491183 CCDC17Q96LX7 622 aa21.63■■□□□ 1.05
HMGN1-219ENST00000491183 RABGAP1Q9Y3P9 1069 aa21.63■■□□□ 1.05
HMGN1-219ENST00000491183 SGPL1O95470 568 aa21.62■■□□□ 1.05
HMGN1-219ENST00000491183 LBX2Q6XYB7 198 aa21.62■■□□□ 1.05
HMGN1-219ENST00000491183 UBE2Q1Q7Z7E8 422 aa21.62■■□□□ 1.05
HMGN1-219ENST00000491183 AMOTL1Q8IY63 956 aa21.62■■□□□ 1.05
HMGN1-219ENST00000491183 SALL3Q9BXA9 1300 aa21.61■■□□□ 1.05
HMGN1-219ENST00000491183 ZFYP08048 801 aaPredicted RBP21.61■■□□□ 1.05
HMGN1-219ENST00000491183 CYP2B6P20813 491 aa21.61■■□□□ 1.05
HMGN1-219ENST00000491183 MAPK4P31152 587 aa21.61■■□□□ 1.05
HMGN1-219ENST00000491183 TRIM32Q13049 653 aa21.61■■□□□ 1.05
HMGN1-219ENST00000491183 SBK1Q52WX2 424 aa21.61■■□□□ 1.05
HMGN1-219ENST00000491183 GPR142Q7Z601 462 aa21.61■■□□□ 1.05
HMGN1-219ENST00000491183 USP6NLQ92738 828 aa21.61■■□□□ 1.05
HMGN1-219ENST00000491183 NUDT12Q9BQG2 462 aa21.61■■□□□ 1.05
HMGN1-219ENST00000491183 PAK6Q9NQU5 681 aaPredicted RBP21.61■■□□□ 1.05
HMGN1-219ENST00000491183 BTBD7Q9P203 1132 aa21.61■■□□□ 1.05
HMGN1-219ENST00000491183 TMX2Q9Y320 296 aa21.61■■□□□ 1.05
HMGN1-219ENST00000491183 SPDYE16A6NNV3 312 aaPredicted RBP21.6■■□□□ 1.05
HMGN1-219ENST00000491183 M0R2C6 588 aa21.6■■□□□ 1.05
HMGN1-219ENST00000491183 ERC2O15083 957 aa21.6■■□□□ 1.05
HMGN1-219ENST00000491183 GPAA1O43292 621 aa21.6■■□□□ 1.05
HMGN1-219ENST00000491183 GLRX3O76003 335 aaKnown RBP21.6■■□□□ 1.05
HMGN1-219ENST00000491183 ANKRD45Q5TZF3 282 aa21.6■■□□□ 1.05
HMGN1-219ENST00000491183 TRIB2Q92519 343 aa21.6■■□□□ 1.05
HMGN1-219ENST00000491183 DEFB118Q96PH6 123 aa21.6■■□□□ 1.05
HMGN1-219ENST00000491183 ARPP21Q9UBL0 812 aaPredicted RBP21.6■■□□□ 1.05
HMGN1-219ENST00000491183 RLFQ13129 1914 aa21.6■■□□□ 1.05
HMGN1-219ENST00000491183 HMGCRP04035 888 aa21.59■■□□□ 1.05
HMGN1-219ENST00000491183 MX1P20591 662 aa21.59■■□□□ 1.05
HMGN1-219ENST00000491183 ICA1Q05084 483 aa21.59■■□□□ 1.05
HMGN1-219ENST00000491183 HDAC1Q13547 482 aaPredicted RBP21.59■■□□□ 1.05
HMGN1-219ENST00000491183 MORN1Q5T089 497 aa21.59■■□□□ 1.05
HMGN1-219ENST00000491183 GIMAP6Q6P9H5 292 aa21.59■■□□□ 1.05
HMGN1-219ENST00000491183 PLEKHH3Q7Z736 793 aa21.59■■□□□ 1.05
HMGN1-219ENST00000491183 CCAR1Q8IX12 1150 aaKnown RBP21.59■■□□□ 1.05
HMGN1-219ENST00000491183 SEC62Q99442 399 aaKnown RBP21.59■■□□□ 1.05
HMGN1-219ENST00000491183 XRCC5P13010 732 aaKnown RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms