RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 CDK8P49336 464 aa26.47■■□□□ 1.83
USF3-203ENST00000491165 CYB5R4Q7L1T6 521 aa26.47■■□□□ 1.83
USF3-203ENST00000491165 TOMM22Q9NS69 142 aa26.47■■□□□ 1.83
USF3-203ENST00000491165 PI4KBQ9UBF8 816 aa26.47■■□□□ 1.83
USF3-203ENST00000491165 ANTXR2P58335 489 aa26.47■■□□□ 1.83
USF3-203ENST00000491165 TNFAIP1Q13829 316 aa26.47■■□□□ 1.83
USF3-203ENST00000491165 NCOA7Q8NI08 942 aa26.47■■□□□ 1.83
USF3-203ENST00000491165 LRRC2Q9BYS8 371 aa26.47■■□□□ 1.83
USF3-203ENST00000491165 KDM4AO75164 1064 aa26.46■■□□□ 1.83
USF3-203ENST00000491165 KRT85P78386 507 aa26.46■■□□□ 1.83
USF3-203ENST00000491165 ZSWIM5Q9P217 1185 aa26.46■■□□□ 1.83
USF3-203ENST00000491165 HLA-DOAP06340 250 aa26.45■■□□□ 1.83
USF3-203ENST00000491165 APOBEC3FQ8IUX4 373 aaKnown RBP26.45■■□□□ 1.83
USF3-203ENST00000491165 SHMT1P34896 483 aa26.45■■□□□ 1.82
USF3-203ENST00000491165 TNNI2P48788 182 aa26.45■■□□□ 1.82
USF3-203ENST00000491165 EHD4Q9H223 541 aa26.45■■□□□ 1.82
USF3-203ENST00000491165 PITPNM2Q9BZ72 1349 aa26.44■■□□□ 1.82
USF3-203ENST00000491165 ADM5C9JUS6 153 aa26.44■■□□□ 1.82
USF3-203ENST00000491165 RASA1P20936 1047 aa26.44■■□□□ 1.82
USF3-203ENST00000491165 FAM47AQ5JRC9 791 aa26.44■■□□□ 1.82
USF3-203ENST00000491165 NBPF12Q5TAG4 269 aaPredicted RBP26.44■■□□□ 1.82
USF3-203ENST00000491165 MIGA2Q7L4E1 593 aa26.44■■□□□ 1.82
USF3-203ENST00000491165 METTL16Q86W50 562 aaKnown RBP26.44■■□□□ 1.82
USF3-203ENST00000491165 RNF41Q9H4P4 317 aaPredicted RBP26.44■■□□□ 1.82
USF3-203ENST00000491165 UQCRHLA0A096LP55 91 aa26.44■■□□□ 1.82
USF3-203ENST00000491165 UQCRHP07919 91 aa26.44■■□□□ 1.82
USF3-203ENST00000491165 VEGFAP15692 232 aaPredicted RBP26.44■■□□□ 1.82
USF3-203ENST00000491165 EXOSC10Q01780 885 aaKnown RBP26.44■■□□□ 1.82
USF3-203ENST00000491165 PDE4BQ07343 736 aa26.44■■□□□ 1.82
USF3-203ENST00000491165 SHROOM1Q2M3G4 852 aaPredicted RBP26.44■■□□□ 1.82
USF3-203ENST00000491165 CDC37L1Q7L3B6 337 aa26.44■■□□□ 1.82
USF3-203ENST00000491165 GPHNQ9NQX3 736 aaPredicted RBP26.44■■□□□ 1.82
USF3-203ENST00000491165 ORC4O43929 436 aa26.43■■□□□ 1.82
USF3-203ENST00000491165 SASS6Q6UVJ0 657 aa26.43■■□□□ 1.82
USF3-203ENST00000491165 RALYLQ86SE5 291 aaKnown RBP26.43■■□□□ 1.82
USF3-203ENST00000491165 ZKSCAN3Q9BRR0 538 aa26.43■■□□□ 1.82
USF3-203ENST00000491165 PDCL3Q9H2J4 239 aa26.43■■□□□ 1.82
USF3-203ENST00000491165 FZD1Q9UP38 647 aa26.43■■□□□ 1.82
USF3-203ENST00000491165 ELP1O95163 1332 aa26.43■■□□□ 1.82
USF3-203ENST00000491165 RANBP6O60518 1105 aaKnown RBP26.42■■□□□ 1.82
USF3-203ENST00000491165 SLC3A2P08195 630 aaKnown RBP26.42■■□□□ 1.82
USF3-203ENST00000491165 TRDNQ13061 729 aa26.42■■□□□ 1.82
USF3-203ENST00000491165 RRP1BQ14684 758 aaKnown RBP26.42■■□□□ 1.82
USF3-203ENST00000491165 SSC5DA1L4H1 1573 aa26.42■■□□□ 1.82
USF3-203ENST00000491165 TOB2Q14106 344 aaPredicted RBP26.42■■□□□ 1.82
USF3-203ENST00000491165 DHX32Q7L7V1 743 aaKnown RBP26.42■■□□□ 1.82
USF3-203ENST00000491165 PNMA8AQ86V59 439 aaPredicted RBP26.42■■□□□ 1.82
USF3-203ENST00000491165 CRACR2BQ8N4Y2 399 aaPredicted RBP26.42■■□□□ 1.82
USF3-203ENST00000491165 DCPSQ96C86 337 aaKnown RBP26.42■■□□□ 1.82
USF3-203ENST00000491165 CNNM2Q9H8M5 875 aa26.42■■□□□ 1.82
USF3-203ENST00000491165 MKNK2Q9HBH9 465 aa26.42■■□□□ 1.82
USF3-203ENST00000491165 ZC3H15Q8WU90 426 aaKnown RBP26.41■■□□□ 1.82
USF3-203ENST00000491165 KRT23Q9C075 422 aa26.41■■□□□ 1.82
USF3-203ENST00000491165 NMT2O60551 498 aa26.41■■□□□ 1.82
USF3-203ENST00000491165 CCDC192P0DO97 292 aa26.4■■□□□ 1.82
USF3-203ENST00000491165 PCP11498 1178 aaKnown RBP26.4■■□□□ 1.82
USF3-203ENST00000491165 KRT26Q7Z3Y9 468 aa26.4■■□□□ 1.82
USF3-203ENST00000491165 FERMT3Q86UX7 667 aa26.4■■□□□ 1.82
USF3-203ENST00000491165 FOXP4Q8IVH2 680 aaPredicted RBP26.4■■□□□ 1.82
USF3-203ENST00000491165 PIBF1Q8WXW3 757 aa26.4■■□□□ 1.82
USF3-203ENST00000491165 SENP2Q9HC62 589 aa26.4■■□□□ 1.82
USF3-203ENST00000491165 PRC1O43663 620 aa26.39■■□□□ 1.82
USF3-203ENST00000491165 ESR2Q92731 530 aa26.39■■□□□ 1.82
USF3-203ENST00000491165 GLIS2Q9BZE0 524 aaPredicted RBP26.39■■□□□ 1.82
USF3-203ENST00000491165 HMGB1P09429 215 aaKnown RBP26.39■■□□□ 1.81
USF3-203ENST00000491165 JAG1P78504 1218 aa26.39■■□□□ 1.81
USF3-203ENST00000491165 TATDN1Q6P1N9 297 aa26.39■■□□□ 1.81
USF3-203ENST00000491165 GREB1LQ9C091 1923 aaPredicted RBP26.39■■□□□ 1.81
USF3-203ENST00000491165 AKR1B1P15121 316 aa26.38■■□□□ 1.81
USF3-203ENST00000491165 TFAP4Q01664 338 aa26.38■■□□□ 1.81
USF3-203ENST00000491165 MAP1SQ66K74 1059 aaPredicted RBP26.38■■□□□ 1.81
USF3-203ENST00000491165 Q6ZUG5 572 aa26.38■■□□□ 1.81
USF3-203ENST00000491165 SULF1Q8IWU6 871 aa26.38■■□□□ 1.81
USF3-203ENST00000491165 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.38■■□□□ 1.81
USF3-203ENST00000491165 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.38■■□□□ 1.81
USF3-203ENST00000491165 IL17RBQ9NRM6 502 aa26.38■■□□□ 1.81
USF3-203ENST00000491165 SWAP70Q9UH65 585 aa26.38■■□□□ 1.81
USF3-203ENST00000491165 MAP3K10Q02779 954 aa26.38■■□□□ 1.81
USF3-203ENST00000491165 ZNF830Q96NB3 372 aaPredicted RBP26.38■■□□□ 1.81
USF3-203ENST00000491165 SCAND2PQ9GZW5 306 aaPredicted RBP26.38■■□□□ 1.81
USF3-203ENST00000491165 CLEC11AQ9Y240 323 aa26.38■■□□□ 1.81
USF3-203ENST00000491165 TSPY2A6NKD2 308 aa26.37■■□□□ 1.81
USF3-203ENST00000491165 HERC5Q9UII4 1024 aaKnown RBP26.37■■□□□ 1.81
USF3-203ENST00000491165 DYNC1I1O14576 645 aa26.36■■□□□ 1.81
USF3-203ENST00000491165 FMR1Q06787 632 aaKnown RBP eCLIP26.36■■□□□ 1.81
USF3-203ENST00000491165 ZNF444Q8N0Y2 327 aaPredicted RBP26.36■■□□□ 1.81
USF3-203ENST00000491165 IGDCC4Q8TDY8 1250 aa26.36■■□□□ 1.81
USF3-203ENST00000491165 CLEC10AQ8IUN9 316 aa26.36■■□□□ 1.81
USF3-203ENST00000491165 NUP62CLQ9H1M0 184 aa26.36■■□□□ 1.81
USF3-203ENST00000491165 TTC12Q9H892 705 aaPredicted RBP26.36■■□□□ 1.81
USF3-203ENST00000491165 TBC1D12O60347 775 aa26.35■■□□□ 1.81
USF3-203ENST00000491165 GDF11O95390 407 aa26.35■■□□□ 1.81
USF3-203ENST00000491165 PLCB2Q00722 1185 aa26.35■■□□□ 1.81
USF3-203ENST00000491165 STK3Q13188 491 aa26.35■■□□□ 1.81
USF3-203ENST00000491165 MAP3K11Q16584 847 aa26.35■■□□□ 1.81
USF3-203ENST00000491165 FAM173BQ6P4H8 233 aa26.35■■□□□ 1.81
USF3-203ENST00000491165 AGXT2Q9BYV1 514 aa26.35■■□□□ 1.81
USF3-203ENST00000491165 PPP2R3BQ9Y5P8 575 aa26.35■■□□□ 1.81
USF3-203ENST00000491165 TSPY3P0CV98 308 aa26.35■■□□□ 1.81
USF3-203ENST00000491165 TSPY8P0CW00 308 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms