RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 ADGRG1Q9Y653 693 aa12.65□□□□□ -0.38
VPS72-205ENST00000491094 KRT9P35527 623 aa12.65□□□□□ -0.39
VPS72-205ENST00000491094 NR1I3Q14994 352 aa12.65□□□□□ -0.39
VPS72-205ENST00000491094 NCAPH2Q6IBW4 605 aa12.65□□□□□ -0.39
VPS72-205ENST00000491094 RASGRP4Q8TDF6 673 aa12.65□□□□□ -0.39
VPS72-205ENST00000491094 WDR17Q8IZU2 1322 aa12.64□□□□□ -0.39
VPS72-205ENST00000491094 CTAGE9A4FU28 777 aa12.64□□□□□ -0.39
VPS72-205ENST00000491094 ACTN4O43707 911 aaKnown RBP12.64□□□□□ -0.39
VPS72-205ENST00000491094 VEGFAP15692 232 aaPredicted RBP12.64□□□□□ -0.39
VPS72-205ENST00000491094 KCNJ6P48051 423 aa12.64□□□□□ -0.39
VPS72-205ENST00000491094 RGS22Q8NE09 1264 aa12.64□□□□□ -0.39
VPS72-205ENST00000491094 PLEKHA4Q9H4M7 779 aa12.64□□□□□ -0.39
VPS72-205ENST00000491094 KRT2P35908 639 aa12.64□□□□□ -0.39
VPS72-205ENST00000491094 SPATA1Q5VX52 437 aa12.64□□□□□ -0.39
VPS72-205ENST00000491094 CATIPQ7Z7H3 387 aa12.64□□□□□ -0.39
VPS72-205ENST00000491094 ESR2Q92731 530 aa12.64□□□□□ -0.39
VPS72-205ENST00000491094 ZNF18P17022 549 aa12.64□□□□□ -0.39
VPS72-205ENST00000491094 IGHMBP2P38935 993 aaKnown RBP12.64□□□□□ -0.39
VPS72-205ENST00000491094 TXLNAP40222 546 aa12.64□□□□□ -0.39
VPS72-205ENST00000491094 UBXN1Q04323 297 aa12.64□□□□□ -0.39
VPS72-205ENST00000491094 KANK3Q6NY19 840 aa12.64□□□□□ -0.39
VPS72-205ENST00000491094 SMIM5Q71RC9 77 aa12.64□□□□□ -0.39
VPS72-205ENST00000491094 RABEP2Q9H5N1 569 aa12.64□□□□□ -0.39
VPS72-205ENST00000491094 BRMS1Q9HCU9 246 aa12.64□□□□□ -0.39
VPS72-205ENST00000491094 ABCB6Q9NP58 842 aa12.64□□□□□ -0.39
VPS72-205ENST00000491094 CHD2O14647 1828 aaKnown RBP12.64□□□□□ -0.39
VPS72-205ENST00000491094 MRC1P22897 1456 aa12.64□□□□□ -0.39
VPS72-205ENST00000491094 TCRBV5S4A2TA0A5A2 114 aa12.63□□□□□ -0.39
VPS72-205ENST00000491094 MRPS25P82663 173 aaKnown RBP12.63□□□□□ -0.39
VPS72-205ENST00000491094 TBX2Q13207 712 aaPredicted RBP12.63□□□□□ -0.39
VPS72-205ENST00000491094 FOXP1Q9H334 677 aaPredicted RBP12.63□□□□□ -0.39
VPS72-205ENST00000491094 ADAM21Q9UKJ8 722 aa12.63□□□□□ -0.39
VPS72-205ENST00000491094 SOS2Q07890 1332 aaPredicted RBP12.63□□□□□ -0.39
VPS72-205ENST00000491094 H3BQF6 201 aa12.63□□□□□ -0.39
VPS72-205ENST00000491094 ZSCAN26Q16670 478 aa12.63□□□□□ -0.39
VPS72-205ENST00000491094 RABGGTAQ92696 567 aa12.63□□□□□ -0.39
VPS72-205ENST00000491094 GDAQ9Y2T3 454 aa12.63□□□□□ -0.39
VPS72-205ENST00000491094 RNF225M0QZC1 329 aaPredicted RBP12.63□□□□□ -0.39
VPS72-205ENST00000491094 CAPN2P17655 700 aa12.63□□□□□ -0.39
VPS72-205ENST00000491094 TSR1Q2NL82 804 aaKnown RBP12.63□□□□□ -0.39
VPS72-205ENST00000491094 HSP90B2PQ58FF3 399 aa12.63□□□□□ -0.39
VPS72-205ENST00000491094 SUSD4Q5VX71 490 aa12.63□□□□□ -0.39
VPS72-205ENST00000491094 ANKRD20A12PQ8NF67 263 aa12.63□□□□□ -0.39
VPS72-205ENST00000491094 DRC1Q96MC2 740 aa12.63□□□□□ -0.39
VPS72-205ENST00000491094 PNKPQ96T60 521 aa12.63□□□□□ -0.39
VPS72-205ENST00000491094 CHP1Q99653 195 aa12.63□□□□□ -0.39
VPS72-205ENST00000491094 SPATA31A3Q5VYP0 1347 aa12.63□□□□□ -0.39
VPS72-205ENST00000491094 C5P01031 1676 aa12.63□□□□□ -0.39
VPS72-205ENST00000491094 RGPD5Q99666 1765 aa12.63□□□□□ -0.39
VPS72-205ENST00000491094 MAGEB6P1A0A0J9YX57 407 aa12.62□□□□□ -0.39
VPS72-205ENST00000491094 SRGAP2O75044 1071 aa12.62□□□□□ -0.39
VPS72-205ENST00000491094 DPYDQ12882 1025 aa12.62□□□□□ -0.39
VPS72-205ENST00000491094 CUL4BQ13620 913 aa12.62□□□□□ -0.39
VPS72-205ENST00000491094 TTC38Q5R3I4 469 aa12.62□□□□□ -0.39
VPS72-205ENST00000491094 SRGAP1Q7Z6B7 1085 aa12.62□□□□□ -0.39
VPS72-205ENST00000491094 ADGRA1Q86SQ6 560 aa12.62□□□□□ -0.39
VPS72-205ENST00000491094 KIFC2Q96AC6 838 aa12.62□□□□□ -0.39
VPS72-205ENST00000491094 AK7Q96M32 723 aa12.62□□□□□ -0.39
VPS72-205ENST00000491094 FUT8Q9BYC5 575 aa12.62□□□□□ -0.39
VPS72-205ENST00000491094 TRIM34Q9BYJ4 488 aa12.62□□□□□ -0.39
VPS72-205ENST00000491094 HDAC6Q9UBN7 1215 aa12.62□□□□□ -0.39
VPS72-205ENST00000491094 FBXO3Q9UK99 471 aa12.62□□□□□ -0.39
VPS72-205ENST00000491094 TRIM49BA6NDI0 452 aa12.62□□□□□ -0.39
VPS72-205ENST00000491094 USP17L12C9JPN9 530 aa12.62□□□□□ -0.39
VPS72-205ENST00000491094 USP17L21D6R901 530 aa12.62□□□□□ -0.39
VPS72-205ENST00000491094 FCHSD1Q86WN1 690 aa12.62□□□□□ -0.39
VPS72-205ENST00000491094 RNF41Q9H4P4 317 aaPredicted RBP12.62□□□□□ -0.39
VPS72-205ENST00000491094 FAM53CQ9NYF3 392 aa12.62□□□□□ -0.39
VPS72-205ENST00000491094 CTAGE15A4D2H0 777 aa12.62□□□□□ -0.39
VPS72-205ENST00000491094 CTAGE8P0CG41 777 aa12.62□□□□□ -0.39
VPS72-205ENST00000491094 KCNQ4P56696 695 aa12.62□□□□□ -0.39
VPS72-205ENST00000491094 CTAGE6Q86UF2 777 aa12.62□□□□□ -0.39
VPS72-205ENST00000491094 IQCA1Q86XH1 822 aa12.62□□□□□ -0.39
VPS72-205ENST00000491094 CTAGE4Q8IX94 777 aa12.62□□□□□ -0.39
VPS72-205ENST00000491094 BTG4Q9NY30 223 aa12.62□□□□□ -0.39
VPS72-205ENST00000491094 CDC23Q9UJX2 597 aa12.62□□□□□ -0.39
VPS72-205ENST00000491094 N4BP2Q86UW6 1770 aaPredicted RBP12.62□□□□□ -0.39
VPS72-205ENST00000491094 TRIM28Q13263 835 aaKnown RBP12.62□□□□□ -0.39
VPS72-205ENST00000491094 MATR3P43243 847 aaKnown RBP eCLIP12.61□□□□□ -0.39
VPS72-205ENST00000491094 PPARDQ03181 441 aa12.61□□□□□ -0.39
VPS72-205ENST00000491094 KRT31Q15323 416 aa12.61□□□□□ -0.39
VPS72-205ENST00000491094 NIP7Q9Y221 180 aaKnown RBP eCLIP12.61□□□□□ -0.39
VPS72-205ENST00000491094 FAN1Q9Y2M0 1017 aa12.61□□□□□ -0.39
VPS72-205ENST00000491094 A0A1B0GTH6 734 aa12.61□□□□□ -0.39
VPS72-205ENST00000491094 SARSP49591 514 aaKnown RBP12.61□□□□□ -0.39
VPS72-205ENST00000491094 TMTC2Q8N394 836 aa12.61□□□□□ -0.39
VPS72-205ENST00000491094 VGLL2Q8N8G2 317 aa12.61□□□□□ -0.39
VPS72-205ENST00000491094 ENAHQ8N8S7 591 aaPredicted RBP12.61□□□□□ -0.39
VPS72-205ENST00000491094 CAGE1Q8TC20 777 aa12.61□□□□□ -0.39
VPS72-205ENST00000491094 GPKOWQ92917 476 aaPredicted RBP eCLIP12.61□□□□□ -0.39
VPS72-205ENST00000491094 SLC4A9Q96Q91 983 aa12.61□□□□□ -0.39
VPS72-205ENST00000491094 AFDNP55196 1824 aaKnown RBP12.61□□□□□ -0.39
VPS72-205ENST00000491094 PP2D1A8MPX8 630 aa12.61□□□□□ -0.39
VPS72-205ENST00000491094 GYPCP04921 128 aa12.61□□□□□ -0.39
VPS72-205ENST00000491094 DNA2P51530 1060 aa12.61□□□□□ -0.39
VPS72-205ENST00000491094 NOA1Q8NC60 698 aaKnown RBP12.61□□□□□ -0.39
VPS72-205ENST00000491094 NELFBQ8WX92 580 aa12.61□□□□□ -0.39
VPS72-205ENST00000491094 PSMB7Q99436 277 aa12.61□□□□□ -0.39
VPS72-205ENST00000491094 ADD3Q9UEY8 706 aaKnown RBP12.61□□□□□ -0.39
VPS72-205ENST00000491094 WDR19Q8NEZ3 1342 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms