RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 SNRKQ9NRH2 765 aa16.75■□□□□ 0.27
CTDSP1-210ENST00000491064 PRKAG2Q9UGJ0 569 aa16.75■□□□□ 0.27
CTDSP1-210ENST00000491064 SAP30BPQ9UHR5 308 aaKnown RBP16.75■□□□□ 0.27
CTDSP1-210ENST00000491064 USP17L15C9J2P7 530 aa16.74■□□□□ 0.27
CTDSP1-210ENST00000491064 USP17L13C9JLJ4 530 aa16.74■□□□□ 0.27
CTDSP1-210ENST00000491064 USP17L11C9JVI0 530 aa16.74■□□□□ 0.27
CTDSP1-210ENST00000491064 USP17L18D6R9N7 530 aa16.74■□□□□ 0.27
CTDSP1-210ENST00000491064 USP17L22D6RA61 530 aa16.74■□□□□ 0.27
CTDSP1-210ENST00000491064 USP17L17D6RBQ6 530 aa16.74■□□□□ 0.27
CTDSP1-210ENST00000491064 USP17L19D6RCP7 530 aa16.74■□□□□ 0.27
CTDSP1-210ENST00000491064 USP17L20D6RJB6 530 aa16.74■□□□□ 0.27
CTDSP1-210ENST00000491064 GH2P01242 217 aa16.74■□□□□ 0.27
CTDSP1-210ENST00000491064 HLA-DOAP06340 250 aa16.74■□□□□ 0.27
CTDSP1-210ENST00000491064 CNGA1P29973 690 aa16.74■□□□□ 0.27
CTDSP1-210ENST00000491064 USP17L24Q0WX57 530 aa16.74■□□□□ 0.27
CTDSP1-210ENST00000491064 ZYXQ15942 572 aaKnown RBP16.74■□□□□ 0.27
CTDSP1-210ENST00000491064 WDR78Q5VTH9 848 aa16.74■□□□□ 0.27
CTDSP1-210ENST00000491064 CDX2Q99626 313 aaPredicted RBP16.74■□□□□ 0.27
CTDSP1-210ENST00000491064 CYP2C19P33261 490 aa16.73■□□□□ 0.27
CTDSP1-210ENST00000491064 ATP2B2Q01814 1243 aa16.73■□□□□ 0.27
CTDSP1-210ENST00000491064 G3BP1Q13283 466 aaKnown RBP eCLIP16.73■□□□□ 0.27
CTDSP1-210ENST00000491064 GRB14Q14449 540 aa16.73■□□□□ 0.27
CTDSP1-210ENST00000491064 LBX2Q6XYB7 198 aa16.73■□□□□ 0.27
CTDSP1-210ENST00000491064 CATSPERGQ6ZRH7 1159 aa16.73■□□□□ 0.27
CTDSP1-210ENST00000491064 TRPV1Q8NER1 839 aa16.73■□□□□ 0.27
CTDSP1-210ENST00000491064 NPLOC4Q8TAT6 608 aa16.73■□□□□ 0.27
CTDSP1-210ENST00000491064 PNMA6EA0A0J9YXQ4 647 aa16.72■□□□□ 0.27
CTDSP1-210ENST00000491064 IGHA2P01877 340 aa16.72■□□□□ 0.27
CTDSP1-210ENST00000491064 CYP2E1P05181 493 aaPredicted RBP16.72■□□□□ 0.27
CTDSP1-210ENST00000491064 SHHQ15465 462 aa16.72■□□□□ 0.27
CTDSP1-210ENST00000491064 TTC39AQ5SRH9 613 aa16.72■□□□□ 0.27
CTDSP1-210ENST00000491064 C9orf50Q5SZB4 431 aa16.72■□□□□ 0.27
CTDSP1-210ENST00000491064 TATDN1Q6P1N9 297 aa16.72■□□□□ 0.27
CTDSP1-210ENST00000491064 ATF7IPQ6VMQ6 1270 aa16.72■□□□□ 0.27
CTDSP1-210ENST00000491064 MAFAQ8NHW3 353 aaPredicted RBP16.72■□□□□ 0.27
CTDSP1-210ENST00000491064 FEZ1Q99689 392 aa16.72■□□□□ 0.27
CTDSP1-210ENST00000491064 SEMA6BQ9H3T3 888 aa16.72■□□□□ 0.27
CTDSP1-210ENST00000491064 BTBD7Q9P203 1132 aa16.72■□□□□ 0.27
CTDSP1-210ENST00000491064 ATP11BQ9Y2G3 1177 aa16.72■□□□□ 0.27
CTDSP1-210ENST00000491064 IVNS1ABPQ9Y6Y0 642 aa16.72■□□□□ 0.27
CTDSP1-210ENST00000491064 ZNF236Q9UL36 1845 aa16.71■□□□□ 0.27
CTDSP1-210ENST00000491064 CYBAP13498 195 aa16.71■□□□□ 0.27
CTDSP1-210ENST00000491064 VCAM1P19320 739 aa16.71■□□□□ 0.27
CTDSP1-210ENST00000491064 USP14P54578 494 aa16.71■□□□□ 0.27
CTDSP1-210ENST00000491064 DYNLL1P63167 89 aaKnown RBP16.71■□□□□ 0.27
CTDSP1-210ENST00000491064 GJC2Q5T442 439 aaPredicted RBP16.71■□□□□ 0.27
CTDSP1-210ENST00000491064 ARHGAP45Q92619 1136 aa16.71■□□□□ 0.27
CTDSP1-210ENST00000491064 KIAA1683Q9H0B3 1180 aa16.71■□□□□ 0.27
CTDSP1-210ENST00000491064 SPDYE16A6NNV3 312 aaPredicted RBP16.7■□□□□ 0.26
CTDSP1-210ENST00000491064 RAB3GAP1Q15042 981 aa16.7■□□□□ 0.26
CTDSP1-210ENST00000491064 CCDC158Q5M9N0 1113 aa16.7■□□□□ 0.26
CTDSP1-210ENST00000491064 SLC39A5Q6ZMH5 540 aa16.7■□□□□ 0.26
CTDSP1-210ENST00000491064 ARRDC4Q8NCT1 418 aa16.7■□□□□ 0.26
CTDSP1-210ENST00000491064 ACER1Q8TDN7 264 aa16.7■□□□□ 0.26
CTDSP1-210ENST00000491064 DBNDD2Q9BQY9 259 aa16.7■□□□□ 0.26
CTDSP1-210ENST00000491064 GPR108Q9NPR9 543 aa16.7■□□□□ 0.26
CTDSP1-210ENST00000491064 IGSF3O75054 1194 aa16.69■□□□□ 0.26
CTDSP1-210ENST00000491064 GNAI2P04899 355 aa16.69■□□□□ 0.26
CTDSP1-210ENST00000491064 ZAP70P43403 619 aa16.69■□□□□ 0.26
CTDSP1-210ENST00000491064 RARSP54136 660 aaKnown RBP16.69■□□□□ 0.26
CTDSP1-210ENST00000491064 TNNI3KQ59H18 835 aa16.69■□□□□ 0.26
CTDSP1-210ENST00000491064 MYLIPQ8WY64 445 aa16.69■□□□□ 0.26
CTDSP1-210ENST00000491064 BADQ92934 168 aa16.69■□□□□ 0.26
CTDSP1-210ENST00000491064 EHD4Q9H223 541 aa16.69■□□□□ 0.26
CTDSP1-210ENST00000491064 TTYH1Q9H313 450 aaPredicted RBP16.69■□□□□ 0.26
CTDSP1-210ENST00000491064 PIH1D3Q9NQM4 214 aaKnown RBP16.69■□□□□ 0.26
CTDSP1-210ENST00000491064 PRDM5Q9NQX1 630 aaPredicted RBP16.69■□□□□ 0.26
CTDSP1-210ENST00000491064 FPGT-TNNI3KV9GXZ4 949 aa16.69■□□□□ 0.26
CTDSP1-210ENST00000491064 KBTBD13C9JR72 458 aa16.68■□□□□ 0.26
CTDSP1-210ENST00000491064 SMAD3P84022 425 aaKnown RBP16.68■□□□□ 0.26
CTDSP1-210ENST00000491064 SNX17Q15036 470 aa16.68■□□□□ 0.26
CTDSP1-210ENST00000491064 TRIM60Q495X7 471 aa16.68■□□□□ 0.26
CTDSP1-210ENST00000491064 OLFML2BQ68BL8 750 aa16.68■□□□□ 0.26
CTDSP1-210ENST00000491064 ZNF512BQ96KM6 892 aaPredicted RBP16.68■□□□□ 0.26
CTDSP1-210ENST00000491064 RPAP3Q9H6T3 665 aaPredicted RBP16.68■□□□□ 0.26
CTDSP1-210ENST00000491064 PRDM6Q9NQX0 595 aa16.68■□□□□ 0.26
CTDSP1-210ENST00000491064 SERPINB13Q9UIV8 391 aa16.68■□□□□ 0.26
CTDSP1-210ENST00000491064 CYP7A1P22680 504 aa16.67■□□□□ 0.26
CTDSP1-210ENST00000491064 ADORA2AP29274 412 aa16.67■□□□□ 0.26
CTDSP1-210ENST00000491064 ABCB5Q2M3G0 1257 aa16.67■□□□□ 0.26
CTDSP1-210ENST00000491064 CERKLQ49MI3 558 aaPredicted RBP16.67■□□□□ 0.26
CTDSP1-210ENST00000491064 ANO1Q5XXA6 986 aa16.67■□□□□ 0.26
CTDSP1-210ENST00000491064 DPP9Q86TI2 863 aa16.67■□□□□ 0.26
CTDSP1-210ENST00000491064 PDLIM7Q9NR12 457 aa16.67■□□□□ 0.26
CTDSP1-210ENST00000491064 A0A0G2JMZ2 1700 aa16.67■□□□□ 0.26
CTDSP1-210ENST00000491064 SMCHD1A6NHR9 2005 aa16.67■□□□□ 0.26
CTDSP1-210ENST00000491064 SEPT4O43236 478 aa16.66■□□□□ 0.26
CTDSP1-210ENST00000491064 USP5P45974 858 aa16.66■□□□□ 0.26
CTDSP1-210ENST00000491064 SH3RF1Q7Z6J0 888 aa16.66■□□□□ 0.26
CTDSP1-210ENST00000491064 MIGA1Q8NAN2 632 aa16.66■□□□□ 0.26
CTDSP1-210ENST00000491064 MOV10L1Q9BXT6 1211 aaKnown RBP16.66■□□□□ 0.26
CTDSP1-210ENST00000491064 ZNFX1Q9P2E3 1918 aaKnown RBP16.65■□□□□ 0.26
CTDSP1-210ENST00000491064 TRIM43BA6NCK2 446 aa16.65■□□□□ 0.26
CTDSP1-210ENST00000491064 ZNF316A6NFI3 1004 aaPredicted RBP16.65■□□□□ 0.26
CTDSP1-210ENST00000491064 STRNO43815 780 aa16.65■□□□□ 0.26
CTDSP1-210ENST00000491064 FOSL2P15408 326 aa16.65■□□□□ 0.26
CTDSP1-210ENST00000491064 GUCY1A2P33402 732 aa16.65■□□□□ 0.26
CTDSP1-210ENST00000491064 SHMT1P34896 483 aa16.65■□□□□ 0.26
CTDSP1-210ENST00000491064 C1orf53Q5VUE5 145 aa16.65■□□□□ 0.26
CTDSP1-210ENST00000491064 TTC6Q86TZ1 520 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms