RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 FGD1P98174 961 aa21.89■■□□□ 1.09
MCF2L-230ENST00000491028 FMR1Q06787 632 aaKnown RBP eCLIP21.89■■□□□ 1.09
MCF2L-230ENST00000491028 FSTL1Q12841 308 aa21.89■■□□□ 1.09
MCF2L-230ENST00000491028 WTAPQ15007 396 aa21.89■■□□□ 1.09
MCF2L-230ENST00000491028 SEPT2Q15019 361 aa21.89■■□□□ 1.09
MCF2L-230ENST00000491028 SEC23AQ15436 765 aa21.89■■□□□ 1.09
MCF2L-230ENST00000491028 Q6ZUG5 572 aa21.89■■□□□ 1.09
MCF2L-230ENST00000491028 ANKRD13AQ8IZ07 590 aa21.89■■□□□ 1.09
MCF2L-230ENST00000491028 TMTC2Q8N394 836 aa21.89■■□□□ 1.09
MCF2L-230ENST00000491028 IGDCC4Q8TDY8 1250 aa21.89■■□□□ 1.09
MCF2L-230ENST00000491028 CEP95Q96GE4 821 aa21.89■■□□□ 1.09
MCF2L-230ENST00000491028 GBA2Q9HCG7 927 aaPredicted RBP21.89■■□□□ 1.09
MCF2L-230ENST00000491028 MTMR4Q9NYA4 1195 aa21.89■■□□□ 1.09
MCF2L-230ENST00000491028 FZD1Q9UP38 647 aa21.89■■□□□ 1.09
MCF2L-230ENST00000491028 CSADQ9Y600 493 aa21.89■■□□□ 1.09
MCF2L-230ENST00000491028 NMT2O60551 498 aa21.88■■□□□ 1.09
MCF2L-230ENST00000491028 JAG1P78504 1218 aa21.88■■□□□ 1.09
MCF2L-230ENST00000491028 ICA1Q05084 483 aa21.88■■□□□ 1.09
MCF2L-230ENST00000491028 SHROOM1Q2M3G4 852 aaPredicted RBP21.88■■□□□ 1.09
MCF2L-230ENST00000491028 C2orf69Q8N8R5 385 aa21.88■■□□□ 1.09
MCF2L-230ENST00000491028 ENAHQ8N8S7 591 aaPredicted RBP21.88■■□□□ 1.09
MCF2L-230ENST00000491028 ANKS1AQ92625 1134 aa21.88■■□□□ 1.09
MCF2L-230ENST00000491028 LRRC2Q9BYS8 371 aa21.88■■□□□ 1.09
MCF2L-230ENST00000491028 PICK1Q9NRD5 415 aa21.88■■□□□ 1.09
MCF2L-230ENST00000491028 TSHZ2Q9NRE2 1034 aa21.88■■□□□ 1.09
MCF2L-230ENST00000491028 NYAP2Q9P242 653 aa21.88■■□□□ 1.09
MCF2L-230ENST00000491028 TTLL1O95922 423 aa21.87■■□□□ 1.09
MCF2L-230ENST00000491028 AK2P54819 239 aa21.87■■□□□ 1.09
MCF2L-230ENST00000491028 TOB2Q14106 344 aaPredicted RBP21.87■■□□□ 1.09
MCF2L-230ENST00000491028 RAB3GAP1Q15042 981 aa21.87■■□□□ 1.09
MCF2L-230ENST00000491028 IFIT1BQ5T764 474 aaKnown RBP21.87■■□□□ 1.09
MCF2L-230ENST00000491028 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.87■■□□□ 1.09
MCF2L-230ENST00000491028 SGMS1Q86VZ5 419 aa21.87■■□□□ 1.09
MCF2L-230ENST00000491028 ZKSCAN4Q969J2 545 aaPredicted RBP21.87■■□□□ 1.09
MCF2L-230ENST00000491028 TBC1D2Q9BYX2 928 aa21.87■■□□□ 1.09
MCF2L-230ENST00000491028 LY9Q9HBG7 655 aa21.87■■□□□ 1.09
MCF2L-230ENST00000491028 SYNPO2Q9UMS6 1093 aa21.87■■□□□ 1.09
MCF2L-230ENST00000491028 STX8Q9UNK0 236 aa21.87■■□□□ 1.09
MCF2L-230ENST00000491028 PHIPQ8WWQ0 1821 aa21.87■■□□□ 1.09
MCF2L-230ENST00000491028 MCM2P49736 904 aa21.86■■□□□ 1.09
MCF2L-230ENST00000491028 VGLL4Q14135 290 aa21.86■■□□□ 1.09
MCF2L-230ENST00000491028 LDLRAD1Q5T700 205 aa21.86■■□□□ 1.09
MCF2L-230ENST00000491028 RCSD1Q6JBY9 416 aa21.86■■□□□ 1.09
MCF2L-230ENST00000491028 BRF1Q92994 677 aa21.86■■□□□ 1.09
MCF2L-230ENST00000491028 SNCAIPQ9Y6H5 919 aa21.86■■□□□ 1.09
MCF2L-230ENST00000491028 USP17L5A8MUK1 530 aa21.85■■□□□ 1.09
MCF2L-230ENST00000491028 MOB2Q70IA6 237 aa21.85■■□□□ 1.09
MCF2L-230ENST00000491028 SH2D4AQ9H788 454 aa21.85■■□□□ 1.09
MCF2L-230ENST00000491028 AS3MTQ9HBK9 375 aa21.85■■□□□ 1.09
MCF2L-230ENST00000491028 ARHGEF10LQ9HCE6 1279 aa21.85■■□□□ 1.09
MCF2L-230ENST00000491028 CCDC69A6NI79 296 aa21.84■■□□□ 1.09
MCF2L-230ENST00000491028 TOP1P11387 765 aaKnown RBP21.84■■□□□ 1.09
MCF2L-230ENST00000491028 PTPRAP18433 802 aa21.84■■□□□ 1.09
MCF2L-230ENST00000491028 EVCP57679 992 aa21.84■■□□□ 1.09
MCF2L-230ENST00000491028 CST9Q5W186 159 aa21.84■■□□□ 1.09
MCF2L-230ENST00000491028 CLEC10AQ8IUN9 316 aa21.84■■□□□ 1.09
MCF2L-230ENST00000491028 MKL1Q969V6 931 aa21.84■■□□□ 1.09
MCF2L-230ENST00000491028 KAT14Q9H8E8 782 aa21.84■■□□□ 1.09
MCF2L-230ENST00000491028 GPHNQ9NQX3 736 aaPredicted RBP21.84■■□□□ 1.09
MCF2L-230ENST00000491028 UBE2Q2LH0YL09 131 aa21.83■■□□□ 1.09
MCF2L-230ENST00000491028 EEF2P13639 858 aaKnown RBP21.83■■□□□ 1.09
MCF2L-230ENST00000491028 NFXL1Q6ZNB6 911 aa21.83■■□□□ 1.09
MCF2L-230ENST00000491028 SNX21Q969T3 373 aa21.83■■□□□ 1.09
MCF2L-230ENST00000491028 TMEM47Q9BQJ4 181 aa21.83■■□□□ 1.09
MCF2L-230ENST00000491028 WDR18Q9BV38 432 aa21.83■■□□□ 1.09
MCF2L-230ENST00000491028 CLIP2Q9UDT6 1046 aa21.83■■□□□ 1.09
MCF2L-230ENST00000491028 SPDYE5A6NIY4 337 aa21.82■■□□□ 1.08
MCF2L-230ENST00000491028 RCAN1P53805 252 aa21.82■■□□□ 1.08
MCF2L-230ENST00000491028 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.82■■□□□ 1.08
MCF2L-230ENST00000491028 KLF18A0A0U1RQI7 1052 aa21.81■■□□□ 1.08
MCF2L-230ENST00000491028 ATP2B2Q01814 1243 aa21.81■■□□□ 1.08
MCF2L-230ENST00000491028 APOBRQ0VD83 1088 aa21.81■■□□□ 1.08
MCF2L-230ENST00000491028 APOA5Q6Q788 366 aa21.81■■□□□ 1.08
MCF2L-230ENST00000491028 SYNE3Q6ZMZ3 975 aa21.81■■□□□ 1.08
MCF2L-230ENST00000491028 CATIPQ7Z7H3 387 aa21.81■■□□□ 1.08
MCF2L-230ENST00000491028 ERO1BQ86YB8 467 aa21.81■■□□□ 1.08
MCF2L-230ENST00000491028 SIAH1Q8IUQ4 282 aa21.81■■□□□ 1.08
MCF2L-230ENST00000491028 PNMA1Q8ND90 353 aa21.81■■□□□ 1.08
MCF2L-230ENST00000491028 ELP3Q9H9T3 547 aa21.81■■□□□ 1.08
MCF2L-230ENST00000491028 SENP2Q9HC62 589 aa21.81■■□□□ 1.08
MCF2L-230ENST00000491028 LIMCH1Q9UPQ0 1083 aa21.81■■□□□ 1.08
MCF2L-230ENST00000491028 TMX2Q9Y320 296 aa21.81■■□□□ 1.08
MCF2L-230ENST00000491028 SLC12A7Q9Y666 1083 aa21.81■■□□□ 1.08
MCF2L-230ENST00000491028 DDAH1O94760 285 aa21.8■■□□□ 1.08
MCF2L-230ENST00000491028 CD2BP2O95400 341 aaKnown RBP21.8■■□□□ 1.08
MCF2L-230ENST00000491028 CALM1P0DP23 149 aa21.8■■□□□ 1.08
MCF2L-230ENST00000491028 CALM2P0DP24 149 aa21.8■■□□□ 1.08
MCF2L-230ENST00000491028 CALM3P0DP25 149 aa21.8■■□□□ 1.08
MCF2L-230ENST00000491028 PPATQ06203 517 aa21.8■■□□□ 1.08
MCF2L-230ENST00000491028 ZNF654Q8IZM8 581 aa21.8■■□□□ 1.08
MCF2L-230ENST00000491028 ZNF274Q96GC6 653 aaPredicted RBP21.8■■□□□ 1.08
MCF2L-230ENST00000491028 CLMNQ96JQ2 1002 aa21.8■■□□□ 1.08
MCF2L-230ENST00000491028 ZSCAN31Q96LW9 406 aaPredicted RBP21.8■■□□□ 1.08
MCF2L-230ENST00000491028 BRPF3Q9ULD4 1205 aa21.8■■□□□ 1.08
MCF2L-230ENST00000491028 NID2Q14112 1375 aa21.79■■□□□ 1.08
MCF2L-230ENST00000491028 A0A1W2PRG0 241 aa21.79■■□□□ 1.08
MCF2L-230ENST00000491028 CCDC84Q86UT8 332 aaPredicted RBP21.79■■□□□ 1.08
MCF2L-230ENST00000491028 LRRC47Q8N1G4 583 aaKnown RBP21.79■■□□□ 1.08
MCF2L-230ENST00000491028 ZNF280CQ8ND82 737 aa21.79■■□□□ 1.08
MCF2L-230ENST00000491028 GMCL1P1Q8NEA9 526 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms