RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 NSUN7Q8NE18 718 aaKnown RBP11.95□□□□□ -0.5
HDAC3-210ENST00000490808 FOXD4L4Q8WXT5 416 aaPredicted RBP11.95□□□□□ -0.5
HDAC3-210ENST00000490808 HHIPL1Q96JK4 782 aa11.95□□□□□ -0.5
HDAC3-210ENST00000490808 SCAND2PQ9GZW5 306 aaPredicted RBP11.95□□□□□ -0.5
HDAC3-210ENST00000490808 NBPF3Q9H094 633 aa11.95□□□□□ -0.5
HDAC3-210ENST00000490808 MCM9Q9NXL9 1143 aa11.95□□□□□ -0.5
HDAC3-210ENST00000490808 ZNF70Q9UC06 446 aaPredicted RBP11.95□□□□□ -0.5
HDAC3-210ENST00000490808 CFAP45Q9UL16 551 aa11.95□□□□□ -0.5
HDAC3-210ENST00000490808 MTMR6Q9Y217 621 aa11.95□□□□□ -0.5
HDAC3-210ENST00000490808 BAZ2AQ9UIF9 1905 aaKnown RBP11.94□□□□□ -0.5
HDAC3-210ENST00000490808 THSD7BQ9C0I4 1608 aa11.94□□□□□ -0.5
HDAC3-210ENST00000490808 GOLGA8AA7E2F4 631 aa11.94□□□□□ -0.5
HDAC3-210ENST00000490808 RANBP6O60518 1105 aaKnown RBP11.94□□□□□ -0.5
HDAC3-210ENST00000490808 BTDP43251 543 aa11.94□□□□□ -0.5
HDAC3-210ENST00000490808 TRIM29Q14134 588 aa11.94□□□□□ -0.5
HDAC3-210ENST00000490808 GRIK5Q16478 980 aa11.94□□□□□ -0.5
HDAC3-210ENST00000490808 L1TD1Q5T7N2 865 aaKnown RBP11.94□□□□□ -0.5
HDAC3-210ENST00000490808 APOA5Q6Q788 366 aa11.94□□□□□ -0.5
HDAC3-210ENST00000490808 CATIPQ7Z7H3 387 aa11.94□□□□□ -0.5
HDAC3-210ENST00000490808 TEX11Q8IYF3 940 aa11.94□□□□□ -0.5
HDAC3-210ENST00000490808 TRIM22Q8IYM9 498 aa11.94□□□□□ -0.5
HDAC3-210ENST00000490808 DEFB129Q9H1M3 183 aa11.94□□□□□ -0.5
HDAC3-210ENST00000490808 LY9Q9HBG7 655 aa11.94□□□□□ -0.5
HDAC3-210ENST00000490808 LMBRD1Q9NUN5 540 aa11.94□□□□□ -0.5
HDAC3-210ENST00000490808 PAPPA2Q9BXP8 1791 aa11.94□□□□□ -0.5
HDAC3-210ENST00000490808 CDK5RAP2Q96SN8 1893 aa11.93□□□□□ -0.5
HDAC3-210ENST00000490808 XBP1P17861 261 aa11.93□□□□□ -0.5
HDAC3-210ENST00000490808 AKAP17AQ02040 695 aaKnown RBP11.93□□□□□ -0.5
HDAC3-210ENST00000490808 SSRP1Q08945 709 aaKnown RBP11.93□□□□□ -0.5
HDAC3-210ENST00000490808 ST3GAL1Q11201 340 aa11.93□□□□□ -0.5
HDAC3-210ENST00000490808 DIXDC1Q155Q3 683 aa11.93□□□□□ -0.5
HDAC3-210ENST00000490808 IFIT1BQ5T764 474 aaKnown RBP11.93□□□□□ -0.5
HDAC3-210ENST00000490808 CDC42EP5Q6NZY7 148 aa11.93□□□□□ -0.5
HDAC3-210ENST00000490808 TTC6Q86TZ1 520 aa11.93□□□□□ -0.5
HDAC3-210ENST00000490808 ZNF444Q8N0Y2 327 aaPredicted RBP11.93□□□□□ -0.5
HDAC3-210ENST00000490808 TMEM87AQ8NBN3 555 aa11.93□□□□□ -0.5
HDAC3-210ENST00000490808 ZNF384Q8TF68 577 aa11.93□□□□□ -0.5
HDAC3-210ENST00000490808 FAM151AQ8WW52 585 aa11.93□□□□□ -0.5
HDAC3-210ENST00000490808 DDX11Q96FC9 970 aa11.93□□□□□ -0.5
HDAC3-210ENST00000490808 ZNF396Q96N95 335 aaPredicted RBP11.93□□□□□ -0.5
HDAC3-210ENST00000490808 ZSCAN10Q96SZ4 725 aaPredicted RBP11.93□□□□□ -0.5
HDAC3-210ENST00000490808 TDRD3Q9H7E2 651 aaKnown RBP11.93□□□□□ -0.5
HDAC3-210ENST00000490808 MKNK2Q9HBH9 465 aa11.93□□□□□ -0.5
HDAC3-210ENST00000490808 VEZTQ9HBM0 779 aa11.93□□□□□ -0.5
HDAC3-210ENST00000490808 USP40Q9NVE5 1235 aa11.93□□□□□ -0.5
HDAC3-210ENST00000490808 RBM28Q9NW13 759 aaKnown RBP11.93□□□□□ -0.5
HDAC3-210ENST00000490808 ORC3Q9UBD5 711 aaPredicted RBP11.93□□□□□ -0.5
HDAC3-210ENST00000490808 TSKSQ9UJT2 592 aa11.93□□□□□ -0.5
HDAC3-210ENST00000490808 BRPF3Q9ULD4 1205 aa11.93□□□□□ -0.5
HDAC3-210ENST00000490808 MYH1P12882 1939 aa11.92□□□□□ -0.5
HDAC3-210ENST00000490808 NAV1Q8NEY1 1877 aa11.92□□□□□ -0.5
HDAC3-210ENST00000490808 GOLGA6L4A6NEF3 574 aa11.92□□□□□ -0.5
HDAC3-210ENST00000490808 TSPY2A6NKD2 308 aa11.92□□□□□ -0.5
HDAC3-210ENST00000490808 PPP1R12BO60237 982 aaPredicted RBP11.92□□□□□ -0.5
HDAC3-210ENST00000490808 LETM1O95202 739 aaPredicted RBP11.92□□□□□ -0.5
HDAC3-210ENST00000490808 ECE1P42892 770 aa11.92□□□□□ -0.5
HDAC3-210ENST00000490808 PPP4R3BQ5MIZ7 849 aa11.92□□□□□ -0.5
HDAC3-210ENST00000490808 C12orf60Q5U649 245 aa11.92□□□□□ -0.5
HDAC3-210ENST00000490808 USP48Q86UV5 1035 aa11.92□□□□□ -0.5
HDAC3-210ENST00000490808 C2orf69Q8N8R5 385 aa11.92□□□□□ -0.5
HDAC3-210ENST00000490808 SH3RF3Q8TEJ3 882 aaPredicted RBP11.92□□□□□ -0.5
HDAC3-210ENST00000490808 TGFBRAP1Q8WUH2 860 aa11.92□□□□□ -0.5
HDAC3-210ENST00000490808 C8orf76Q96K31 380 aa11.92□□□□□ -0.5
HDAC3-210ENST00000490808 CAPNS2Q96L46 248 aa11.92□□□□□ -0.5
HDAC3-210ENST00000490808 GLIS2Q9BZE0 524 aaPredicted RBP11.92□□□□□ -0.5
HDAC3-210ENST00000490808 DHX36Q9H2U1 1008 aaKnown RBP11.92□□□□□ -0.5
HDAC3-210ENST00000490808 NID2Q14112 1375 aa11.92□□□□□ -0.5
HDAC3-210ENST00000490808 TNKSO95271 1327 aa11.91□□□□□ -0.5
HDAC3-210ENST00000490808 STK36Q9NRP7 1315 aa11.91□□□□□ -0.5
HDAC3-210ENST00000490808 JAK2O60674 1132 aa11.91□□□□□ -0.5
HDAC3-210ENST00000490808 DDAH1O94760 285 aa11.91□□□□□ -0.5
HDAC3-210ENST00000490808 UBE2HP62256 183 aa11.91□□□□□ -0.5
HDAC3-210ENST00000490808 RASA3Q14644 834 aa11.91□□□□□ -0.5
HDAC3-210ENST00000490808 RTN1Q16799 776 aa11.91□□□□□ -0.5
HDAC3-210ENST00000490808 DCAF15Q66K64 600 aa11.91□□□□□ -0.5
HDAC3-210ENST00000490808 CYP4F22Q6NT55 531 aa11.91□□□□□ -0.5
HDAC3-210ENST00000490808 ARMC9Q7Z3E5 817 aa11.91□□□□□ -0.5
HDAC3-210ENST00000490808 CDCA5Q96FF9 252 aa11.91□□□□□ -0.5
HDAC3-210ENST00000490808 MCOLN1Q9GZU1 580 aa11.91□□□□□ -0.5
HDAC3-210ENST00000490808 NCOA5Q9HCD5 579 aaKnown RBP11.91□□□□□ -0.5
HDAC3-210ENST00000490808 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.91□□□□□ -0.5
HDAC3-210ENST00000490808 ATRNL1Q5VV63 1379 aa11.91□□□□□ -0.5
HDAC3-210ENST00000490808 ROBO3Q96MS0 1386 aa11.91□□□□□ -0.5
HDAC3-210ENST00000490808 TCHHQ07283 1943 aa11.9□□□□□ -0.5
HDAC3-210ENST00000490808 CLRN2A0PK11 232 aa11.9□□□□□ -0.5
HDAC3-210ENST00000490808 GOLGA6L3A6NEY3 463 aa11.9□□□□□ -0.5
HDAC3-210ENST00000490808 CELF2O95319 508 aaKnown RBP11.9□□□□□ -0.5
HDAC3-210ENST00000490808 IFNAR1P17181 557 aa11.9□□□□□ -0.5
HDAC3-210ENST00000490808 KIF5BP33176 963 aa11.9□□□□□ -0.5
HDAC3-210ENST00000490808 DEKP35659 375 aaKnown RBP11.9□□□□□ -0.5
HDAC3-210ENST00000490808 RHBDL3P58872 404 aa11.9□□□□□ -0.5
HDAC3-210ENST00000490808 GNL2Q13823 731 aaKnown RBP11.9□□□□□ -0.5
HDAC3-210ENST00000490808 COL9A3Q14050 684 aaPredicted RBP11.9□□□□□ -0.5
HDAC3-210ENST00000490808 SAFBQ15424 915 aaKnown RBP eCLIP11.9□□□□□ -0.5
HDAC3-210ENST00000490808 MAP3K11Q16584 847 aa11.9□□□□□ -0.5
HDAC3-210ENST00000490808 BRAPQ7Z569 592 aa11.9□□□□□ -0.5
HDAC3-210ENST00000490808 MICU3Q86XE3 530 aa11.9□□□□□ -0.5
HDAC3-210ENST00000490808 DGKHQ86XP1 1220 aa11.9□□□□□ -0.5
HDAC3-210ENST00000490808 ZNF654Q8IZM8 581 aa11.9□□□□□ -0.5
HDAC3-210ENST00000490808 FANCBQ8NB91 859 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms