RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 PTSQ03393 145 aa6.02□□□□□ -1.45
PTPRK-213ENST00000490332 NR5A1Q13285 461 aa6.02□□□□□ -1.45
PTPRK-213ENST00000490332 ARID5BQ14865 1188 aa6.02□□□□□ -1.45
PTPRK-213ENST00000490332 ANKRD1Q15327 319 aa6.02□□□□□ -1.45
PTPRK-213ENST00000490332 CSPP1Q1MSJ5 1256 aa6.02□□□□□ -1.45
PTPRK-213ENST00000490332 RNF20Q5VTR2 975 aa6.02□□□□□ -1.45
PTPRK-213ENST00000490332 MCTP1Q6DN14 999 aa6.02□□□□□ -1.45
PTPRK-213ENST00000490332 OTUD7BQ6GQQ9 843 aa6.02□□□□□ -1.45
PTPRK-213ENST00000490332 KANK3Q6NY19 840 aa6.02□□□□□ -1.45
PTPRK-213ENST00000490332 DLK2Q6UY11 383 aa6.02□□□□□ -1.45
PTPRK-213ENST00000490332 SUPT20HQ8NEM7 779 aa6.02□□□□□ -1.45
PTPRK-213ENST00000490332 KCNB2Q92953 911 aa6.02□□□□□ -1.45
PTPRK-213ENST00000490332 TRIM44Q96DX7 344 aaPredicted RBP6.02□□□□□ -1.45
PTPRK-213ENST00000490332 FMNL2Q96PY5 1086 aa6.02□□□□□ -1.45
PTPRK-213ENST00000490332 ALDH8A1Q9H2A2 487 aaPredicted RBP6.02□□□□□ -1.45
PTPRK-213ENST00000490332 SH2B1Q9NRF2 756 aaPredicted RBP6.02□□□□□ -1.45
PTPRK-213ENST00000490332 LMBRD1Q9NUN5 540 aa6.02□□□□□ -1.45
PTPRK-213ENST00000490332 LIMCH1Q9UPQ0 1083 aa6.02□□□□□ -1.45
PTPRK-213ENST00000490332 CHD8Q9HCK8 2581 aa6.01□□□□□ -1.45
PTPRK-213ENST00000490332 PRPF40AO75400 957 aaKnown RBP6.01□□□□□ -1.45
PTPRK-213ENST00000490332 BRD1O95696 1058 aa6.01□□□□□ -1.45
PTPRK-213ENST00000490332 GJB1P08034 283 aa6.01□□□□□ -1.45
PTPRK-213ENST00000490332 EIF5P55010 431 aaKnown RBP6.01□□□□□ -1.45
PTPRK-213ENST00000490332 CCDC173Q0VFZ6 552 aa6.01□□□□□ -1.45
PTPRK-213ENST00000490332 HS1BP3Q53T59 392 aa6.01□□□□□ -1.45
PTPRK-213ENST00000490332 C4orf48Q5BLP8 95 aa6.01□□□□□ -1.45
PTPRK-213ENST00000490332 VPS53Q5VIR6 699 aa6.01□□□□□ -1.45
PTPRK-213ENST00000490332 DESI1Q6ICB0 168 aa6.01□□□□□ -1.45
PTPRK-213ENST00000490332 NBPF5PQ86XG9 351 aaPredicted RBP6.01□□□□□ -1.45
PTPRK-213ENST00000490332 PRR7Q8TB68 274 aa6.01□□□□□ -1.45
PTPRK-213ENST00000490332 CDX2Q99626 313 aaPredicted RBP6.01□□□□□ -1.45
PTPRK-213ENST00000490332 LSG1Q9H089 658 aaKnown RBP6.01□□□□□ -1.45
PTPRK-213ENST00000490332 TMX4Q9H1E5 349 aaPredicted RBP6.01□□□□□ -1.45
PTPRK-213ENST00000490332 GPCPD1Q9NPB8 672 aa6.01□□□□□ -1.45
PTPRK-213ENST00000490332 COPRSQ9NQ92 184 aa6.01□□□□□ -1.45
PTPRK-213ENST00000490332 SNRKQ9NRH2 765 aa6.01□□□□□ -1.45
PTPRK-213ENST00000490332 LAMB1P07942 1786 aa6.01□□□□□ -1.45
PTPRK-213ENST00000490332 NEURL1BA8MQ27 555 aa6□□□□□ -1.45
PTPRK-213ENST00000490332 UPP2O95045 317 aa6□□□□□ -1.45
PTPRK-213ENST00000490332 MYCP01106 439 aaPredicted RBP6□□□□□ -1.45
PTPRK-213ENST00000490332 ITGB2P05107 769 aa6□□□□□ -1.45
PTPRK-213ENST00000490332 RPS12P25398 132 aaKnown RBP6□□□□□ -1.45
PTPRK-213ENST00000490332 PRMT2P55345 433 aa6□□□□□ -1.45
PTPRK-213ENST00000490332 GCKRQ14397 625 aa6□□□□□ -1.45
PTPRK-213ENST00000490332 KRT32Q14532 448 aa6□□□□□ -1.45
PTPRK-213ENST00000490332 AOC3Q16853 763 aa6□□□□□ -1.45
PTPRK-213ENST00000490332 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6□□□□□ -1.452e-6■□□□□ 8.1
PTPRK-213ENST00000490332 AACSQ86V21 672 aa6□□□□□ -1.45
PTPRK-213ENST00000490332 VSIG10Q8N0Z9 540 aa6□□□□□ -1.45
PTPRK-213ENST00000490332 NFATC2IPQ8NCF5 419 aa6□□□□□ -1.45
PTPRK-213ENST00000490332 PLBD2Q8NHP8 589 aa6□□□□□ -1.45
PTPRK-213ENST00000490332 ATXN2LQ8WWM7 1075 aaKnown RBP6□□□□□ -1.45
PTPRK-213ENST00000490332 COL26A1Q96A83 441 aa6□□□□□ -1.45
PTPRK-213ENST00000490332 FAM161BQ96MY7 647 aa6□□□□□ -1.45
PTPRK-213ENST00000490332 UHRF1Q96T88 793 aaPredicted RBP6□□□□□ -1.45
PTPRK-213ENST00000490332 LRFN3Q9BTN0 628 aa6□□□□□ -1.45
PTPRK-213ENST00000490332 TEX13AQ9BXU3 409 aaPredicted RBP6□□□□□ -1.45
PTPRK-213ENST00000490332 UBE2OQ9C0C9 1292 aaKnown RBP6□□□□□ -1.45
PTPRK-213ENST00000490332 GPR108Q9NPR9 543 aa6□□□□□ -1.45
PTPRK-213ENST00000490332 HMG20BQ9P0W2 317 aa6□□□□□ -1.45
PTPRK-213ENST00000490332 SNX14Q9Y5W7 946 aa6□□□□□ -1.45
PTPRK-213ENST00000490332 CYP46A1Q9Y6A2 500 aa6□□□□□ -1.45
PTPRK-213ENST00000490332 COL2A1P02458 1487 aaPredicted RBP6□□□□□ -1.45
PTPRK-213ENST00000490332 FAM205AQ6ZU69 1335 aa5.99□□□□□ -1.45
PTPRK-213ENST00000490332 AK9Q5TCS8 1911 aa5.99□□□□□ -1.45
PTPRK-213ENST00000490332 RFX7Q2KHR2 1363 aa5.99□□□□□ -1.45
PTPRK-213ENST00000490332 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.99□□□□□ -1.45
PTPRK-213ENST00000490332 STARD3NLO95772 234 aa5.99□□□□□ -1.45
PTPRK-213ENST00000490332 GNRH1P01148 92 aa5.99□□□□□ -1.45
PTPRK-213ENST00000490332 FOSL2P15408 326 aa5.99□□□□□ -1.45
PTPRK-213ENST00000490332 ATP5JP18859 108 aa5.99□□□□□ -1.45
PTPRK-213ENST00000490332 NDUFV2P19404 249 aa5.99□□□□□ -1.45
PTPRK-213ENST00000490332 PDCP20941 246 aa5.99□□□□□ -1.45
PTPRK-213ENST00000490332 CLCN1P35523 988 aa5.99□□□□□ -1.45
PTPRK-213ENST00000490332 KCNJ4P48050 445 aa5.99□□□□□ -1.45
PTPRK-213ENST00000490332 AIMP1Q12904 312 aaKnown RBP5.99□□□□□ -1.45
PTPRK-213ENST00000490332 TTLL12Q14166 644 aaPredicted RBP5.99□□□□□ -1.45
PTPRK-213ENST00000490332 LRRFIP1Q32MZ4 808 aaKnown RBP5.99□□□□□ -1.45
PTPRK-213ENST00000490332 TSGA10IPQ3SY00 556 aa5.99□□□□□ -1.45
PTPRK-213ENST00000490332 TBC1D10BQ4KMP7 808 aaPredicted RBP5.99□□□□□ -1.45
PTPRK-213ENST00000490332 TMEM31Q5JXX7 168 aa5.99□□□□□ -1.45
PTPRK-213ENST00000490332 CWC27Q6UX04 472 aaKnown RBP5.99□□□□□ -1.45
PTPRK-213ENST00000490332 TPTE2Q6XPS3 522 aa5.99□□□□□ -1.45
PTPRK-213ENST00000490332 COPS6Q7L5N1 327 aa5.99□□□□□ -1.45
PTPRK-213ENST00000490332 ZGPATQ8N5A5 531 aaKnown RBP5.99□□□□□ -1.45
PTPRK-213ENST00000490332 ADAMTS19Q8TE59 1207 aa5.99□□□□□ -1.45
PTPRK-213ENST00000490332 SH3TC2Q8TF17 1288 aa5.99□□□□□ -1.45
PTPRK-213ENST00000490332 XAGE3Q8WTP9 111 aa5.99□□□□□ -1.45
PTPRK-213ENST00000490332 MAP4K1Q92918 833 aa5.99□□□□□ -1.45
PTPRK-213ENST00000490332 SUCLG2Q96I99 432 aa5.99□□□□□ -1.45
PTPRK-213ENST00000490332 PPP1R9BQ96SB3 815 aa5.99□□□□□ -1.45
PTPRK-213ENST00000490332 PDRG1Q9NUG6 133 aa5.99□□□□□ -1.45
PTPRK-213ENST00000490332 GGA3Q9NZ52 723 aa5.99□□□□□ -1.45
PTPRK-213ENST00000490332 SMC3Q9UQE7 1217 aa5.99□□□□□ -1.45
PTPRK-213ENST00000490332 ZDHHC9Q9Y397 364 aa5.99□□□□□ -1.45
PTPRK-213ENST00000490332 ALPK3Q96L96 1907 aa5.99□□□□□ -1.45
PTPRK-213ENST00000490332 SIPA1L3O60292 1781 aaPredicted RBP5.98□□□□□ -1.45
PTPRK-213ENST00000490332 SSC5DA1L4H1 1573 aa5.98□□□□□ -1.45
PTPRK-213ENST00000490332 PRAMEF22A3QJZ6 481 aa5.98□□□□□ -1.45
PTPRK-213ENST00000490332 TTLL8A6PVC2 850 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms