RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 TOP6BLQ8N6T0 577 aa8.84□□□□□ -0.99
VPS26A-206ENST00000489794 GATA6Q92908 595 aa8.84□□□□□ -0.99
VPS26A-206ENST00000489794 MFSD14AQ96MC6 490 aa8.84□□□□□ -0.99
VPS26A-206ENST00000489794 MIPEPQ99797 713 aa8.84□□□□□ -0.99
VPS26A-206ENST00000489794 DPH2Q9BQC3 489 aaPredicted RBP8.84□□□□□ -0.99
VPS26A-206ENST00000489794 HIRIP3Q9BW71 556 aaPredicted RBP8.84□□□□□ -0.99
VPS26A-206ENST00000489794 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.84□□□□□ -0.99
VPS26A-206ENST00000489794 DNAJA2O60884 412 aa8.83□□□□□ -1
VPS26A-206ENST00000489794 STK10O94804 968 aaKnown RBP8.83□□□□□ -1
VPS26A-206ENST00000489794 CASP7P55210 303 aa8.83□□□□□ -1
VPS26A-206ENST00000489794 FBXL6Q8N531 539 aa8.83□□□□□ -1
VPS26A-206ENST00000489794 ANAPC16Q96DE5 110 aa8.83□□□□□ -1
VPS26A-206ENST00000489794 DHRS1Q96LJ7 313 aa8.83□□□□□ -1
VPS26A-206ENST00000489794 OSBPL1AQ9BXW6 950 aa8.83□□□□□ -1
VPS26A-206ENST00000489794 CEP131Q9UPN4 1083 aa8.83□□□□□ -1
VPS26A-206ENST00000489794 MAPK8IP1Q9UQF2 711 aa8.83□□□□□ -1
VPS26A-206ENST00000489794 SLITRK5O94991 958 aa8.82□□□□□ -1
VPS26A-206ENST00000489794 ZMYM1Q5SVZ6 1142 aa8.82□□□□□ -1
VPS26A-206ENST00000489794 SOGA3Q5TF21 947 aa8.82□□□□□ -1
VPS26A-206ENST00000489794 ANTXR1Q9H6X2 564 aa8.82□□□□□ -1
VPS26A-206ENST00000489794 PRDM5Q9NQX1 630 aaPredicted RBP8.82□□□□□ -1
VPS26A-206ENST00000489794 PRKAG3Q9UGI9 489 aa8.82□□□□□ -1
VPS26A-206ENST00000489794 R3HCC1Q9Y3T6 440 aaKnown RBP8.82□□□□□ -1
VPS26A-206ENST00000489794 WDR64B1ANS9 1081 aa8.81□□□□□ -1
VPS26A-206ENST00000489794 IGF2BP3O00425 579 aaKnown RBP eCLIP8.81□□□□□ -1
VPS26A-206ENST00000489794 F13BP05160 661 aa8.81□□□□□ -1
VPS26A-206ENST00000489794 ADMP35318 185 aa8.81□□□□□ -1
VPS26A-206ENST00000489794 SHKBP1Q8TBC3 707 aa8.81□□□□□ -1
VPS26A-206ENST00000489794 XAGE3Q8WTP9 111 aa8.81□□□□□ -1
VPS26A-206ENST00000489794 KIF2CQ99661 725 aa8.81□□□□□ -1
VPS26A-206ENST00000489794 MKNK2Q9HBH9 465 aa8.81□□□□□ -1
VPS26A-206ENST00000489794 TPX2Q9ULW0 747 aaKnown RBP8.81□□□□□ -1
VPS26A-206ENST00000489794 EOMESO95936 686 aa8.8□□□□□ -1
VPS26A-206ENST00000489794 RNF4P78317 190 aa8.8□□□□□ -1
VPS26A-206ENST00000489794 BBS9Q3SYG4 887 aa8.8□□□□□ -1
VPS26A-206ENST00000489794 NBPF6Q5VWK0 638 aa8.8□□□□□ -1
VPS26A-206ENST00000489794 CKAP2LQ8IYA6 745 aa8.8□□□□□ -1
VPS26A-206ENST00000489794 UBXN4Q92575 508 aa8.8□□□□□ -1
VPS26A-206ENST00000489794 NBPF4Q96M43 638 aa8.8□□□□□ -1
VPS26A-206ENST00000489794 ZNF408Q9H9D4 720 aa8.8□□□□□ -1
VPS26A-206ENST00000489794 GTF2F1P35269 517 aaKnown RBP eCLIP8.79□□□□□ -1
VPS26A-206ENST00000489794 KIR3DL1P43629 444 aa8.79□□□□□ -1
VPS26A-206ENST00000489794 C22orf34Q6ZV56 151 aa8.79□□□□□ -1
VPS26A-206ENST00000489794 ZNF765Q7L2R6 523 aa8.79□□□□□ -1
VPS26A-206ENST00000489794 DNAJB8Q8NHS0 232 aa8.79□□□□□ -1
VPS26A-206ENST00000489794 ASPNQ9BXN1 380 aa8.79□□□□□ -1
VPS26A-206ENST00000489794 PHAXQ9H814 394 aaKnown RBP8.79□□□□□ -1
VPS26A-206ENST00000489794 PPP1R1BQ9UD71 204 aaPredicted RBP8.79□□□□□ -1
VPS26A-206ENST00000489794 LEMD3Q9Y2U8 911 aa8.79□□□□□ -1
VPS26A-206ENST00000489794 MRVI1Q9Y6F6 885 aa8.79□□□□□ -1
VPS26A-206ENST00000489794 FAM170BA6NMN3 283 aa8.78□□□□□ -1
VPS26A-206ENST00000489794 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.78□□□□□ -1
VPS26A-206ENST00000489794 CLEC3AO75596 197 aa8.78□□□□□ -1
VPS26A-206ENST00000489794 LEFTY1O75610 366 aa8.78□□□□□ -1
VPS26A-206ENST00000489794 ETFBP38117 255 aa8.78□□□□□ -1
VPS26A-206ENST00000489794 SFRP5Q5T4F7 317 aa8.78□□□□□ -1
VPS26A-206ENST00000489794 TTC6Q86TZ1 520 aa8.78□□□□□ -1
VPS26A-206ENST00000489794 ZDHHC13Q8IUH4 622 aa8.78□□□□□ -1
VPS26A-206ENST00000489794 BAHD1Q8TBE0 780 aaPredicted RBP8.78□□□□□ -1
VPS26A-206ENST00000489794 PPP1R13LQ8WUF5 828 aa8.78□□□□□ -1
VPS26A-206ENST00000489794 RNF141Q8WVD5 230 aa8.78□□□□□ -1
VPS26A-206ENST00000489794 SMARCC1Q92922 1105 aaPredicted RBP8.78□□□□□ -1
VPS26A-206ENST00000489794 SLC9A7Q96T83 725 aa8.78□□□□□ -1
VPS26A-206ENST00000489794 KRTAP9-2Q9BYQ4 174 aa8.78□□□□□ -1
VPS26A-206ENST00000489794 ACTR10Q9NZ32 417 aa8.78□□□□□ -1
VPS26A-206ENST00000489794 PIM2Q9P1W9 311 aa8.78□□□□□ -1
VPS26A-206ENST00000489794 SMAD7O15105 426 aaKnown RBP8.77□□□□□ -1.01
VPS26A-206ENST00000489794 UBOX5O94941 541 aa8.77□□□□□ -1.01
VPS26A-206ENST00000489794 ACRP10323 421 aa8.77□□□□□ -1.01
VPS26A-206ENST00000489794 GRIK1P39086 918 aa8.77□□□□□ -1.01
VPS26A-206ENST00000489794 RBL2Q08999 1139 aa8.77□□□□□ -1.01
VPS26A-206ENST00000489794 PPP2R5EQ16537 467 aa8.77□□□□□ -1.01
VPS26A-206ENST00000489794 PRSS36Q5K4E3 855 aa8.77□□□□□ -1.01
VPS26A-206ENST00000489794 UNC5AQ6ZN44 842 aa8.77□□□□□ -1.01
VPS26A-206ENST00000489794 ARHGAP27Q6ZUM4 889 aa8.77□□□□□ -1.01
VPS26A-206ENST00000489794 CDH24Q86UP0 819 aa8.77□□□□□ -1.01
VPS26A-206ENST00000489794 FBXL18Q96ME1 805 aa8.77□□□□□ -1.01
VPS26A-206ENST00000489794 A0A1W2PQH9 124 aa8.76□□□□□ -1.01
VPS26A-206ENST00000489794 GNAT3A8MTJ3 354 aa8.76□□□□□ -1.01
VPS26A-206ENST00000489794 RUFY4Q6ZNE9 571 aa8.76□□□□□ -1.01
VPS26A-206ENST00000489794 FAM169BQ8N8A8 192 aa8.76□□□□□ -1.01
VPS26A-206ENST00000489794 KREMEN1Q96MU8 473 aa8.76□□□□□ -1.01
VPS26A-206ENST00000489794 SUCOQ9UBS9 1254 aaKnown RBP8.76□□□□□ -1.01
VPS26A-206ENST00000489794 KCNH3Q9ULD8 1083 aa8.76□□□□□ -1.01
VPS26A-206ENST00000489794 ZNF865P0CJ78 1059 aaPredicted RBP8.75□□□□□ -1.01
VPS26A-206ENST00000489794 PMS1P54277 932 aaKnown RBP8.75□□□□□ -1.01
VPS26A-206ENST00000489794 FXNQ16595 210 aa8.75□□□□□ -1.01
VPS26A-206ENST00000489794 INTS5Q6P9B9 1019 aaKnown RBP8.75□□□□□ -1.01
VPS26A-206ENST00000489794 ANKS3Q6ZW76 656 aa8.75□□□□□ -1.01
VPS26A-206ENST00000489794 FAM214BQ7L5A3 538 aa8.75□□□□□ -1.01
VPS26A-206ENST00000489794 RIN3Q8TB24 985 aa8.75□□□□□ -1.01
VPS26A-206ENST00000489794 SLC6A18Q96N87 628 aa8.75□□□□□ -1.01
VPS26A-206ENST00000489794 CYP26A1O43174 497 aa8.74□□□□□ -1.01
VPS26A-206ENST00000489794 FOSL1P15407 271 aa8.74□□□□□ -1.01
VPS26A-206ENST00000489794 POLR2BP30876 1174 aaKnown RBP8.74□□□□□ -1.01
VPS26A-206ENST00000489794 PIWIL2Q8TC59 973 aaKnown RBP8.74□□□□□ -1.01
VPS26A-206ENST00000489794 TRIM55Q9BYV6 548 aa8.74□□□□□ -1.01
VPS26A-206ENST00000489794 ZNF214Q9UL59 606 aaPredicted RBP8.74□□□□□ -1.01
VPS26A-206ENST00000489794 KRTAP9-6A0A140TA67 174 aa8.73□□□□□ -1.01
VPS26A-206ENST00000489794 SCO2A0A1W2PP80 73 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms