RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 ECM2O94769 699 aaPredicted RBP11.25□□□□□ -0.61
NOD1-208ENST00000489614 HMGB1P09429 215 aaKnown RBP11.25□□□□□ -0.61
NOD1-208ENST00000489614 LUZP1Q86V48 1076 aa11.25□□□□□ -0.61
NOD1-208ENST00000489614 TTLL6Q8N841 843 aa11.25□□□□□ -0.61
NOD1-208ENST00000489614 MTA3Q9BTC8 594 aa11.25□□□□□ -0.61
NOD1-208ENST00000489614 PLEKHA4Q9H4M7 779 aa11.25□□□□□ -0.61
NOD1-208ENST00000489614 TPCN1Q9ULQ1 816 aa11.25□□□□□ -0.61
NOD1-208ENST00000489614 CYP46A1Q9Y6A2 500 aa11.25□□□□□ -0.61
NOD1-208ENST00000489614 PPP1R12AO14974 1030 aaPredicted RBP11.25□□□□□ -0.61
NOD1-208ENST00000489614 H2AFXP16104 143 aaPredicted RBP11.25□□□□□ -0.61
NOD1-208ENST00000489614 ARID5BQ14865 1188 aa11.25□□□□□ -0.61
NOD1-208ENST00000489614 LEKR1Q6ZMV7 388 aa11.25□□□□□ -0.61
NOD1-208ENST00000489614 VPS37DQ86XT2 251 aa11.25□□□□□ -0.61
NOD1-208ENST00000489614 AIDAQ96BJ3 306 aa11.25□□□□□ -0.61
NOD1-208ENST00000489614 NEDD4P46934 1319 aa11.25□□□□□ -0.61
NOD1-208ENST00000489614 MPHOSPH10O00566 681 aaKnown RBP11.24□□□□□ -0.61
NOD1-208ENST00000489614 R3HDM1Q15032 1099 aaKnown RBP11.24□□□□□ -0.61
NOD1-208ENST00000489614 DHX32Q7L7V1 743 aaKnown RBP11.24□□□□□ -0.61
NOD1-208ENST00000489614 REXO1L1PQ8IX06 675 aa11.24□□□□□ -0.61
NOD1-208ENST00000489614 PPM1EQ8WY54 764 aa11.24□□□□□ -0.61
NOD1-208ENST00000489614 GMLQ99445 158 aa11.24□□□□□ -0.61
NOD1-208ENST00000489614 LIMCH1Q9UPQ0 1083 aa11.24□□□□□ -0.61
NOD1-208ENST00000489614 ZBTB7AO95365 584 aa11.24□□□□□ -0.61
NOD1-208ENST00000489614 LDHBP07195 334 aaKnown RBP11.24□□□□□ -0.61
NOD1-208ENST00000489614 STRIP1Q5VSL9 837 aa11.24□□□□□ -0.61
NOD1-208ENST00000489614 SUPT20HQ8NEM7 779 aa11.24□□□□□ -0.61
NOD1-208ENST00000489614 ADAM21Q9UKJ8 722 aa11.24□□□□□ -0.61
NOD1-208ENST00000489614 PHIPQ8WWQ0 1821 aa11.24□□□□□ -0.61
NOD1-208ENST00000489614 ACTN2P35609 894 aa11.24□□□□□ -0.61
NOD1-208ENST00000489614 SMC1AQ14683 1233 aaKnown RBP11.24□□□□□ -0.61
NOD1-208ENST00000489614 ME3Q16798 604 aa11.24□□□□□ -0.61
NOD1-208ENST00000489614 RTKN2Q8IZC4 609 aa11.24□□□□□ -0.61
NOD1-208ENST00000489614 MICALL1Q8N3F8 863 aa11.24□□□□□ -0.61
NOD1-208ENST00000489614 EPC1Q9H2F5 836 aa11.24□□□□□ -0.61
NOD1-208ENST00000489614 DCP1AQ9NPI6 582 aaPredicted RBP11.24□□□□□ -0.61
NOD1-208ENST00000489614 ATP8A2Q9NTI2 1148 aa11.24□□□□□ -0.61
NOD1-208ENST00000489614 CNPY2Q9Y2B0 182 aa11.24□□□□□ -0.61
NOD1-208ENST00000489614 PARP14Q460N5 1801 aa11.24□□□□□ -0.61
NOD1-208ENST00000489614 BRD1O95696 1058 aa11.23□□□□□ -0.61
NOD1-208ENST00000489614 IBSPP21815 317 aaPredicted RBP11.23□□□□□ -0.61
NOD1-208ENST00000489614 NT5C2P49902 561 aa11.23□□□□□ -0.61
NOD1-208ENST00000489614 GSTO1P78417 241 aa11.23□□□□□ -0.61
NOD1-208ENST00000489614 HDLBPQ00341 1268 aaKnown RBP11.23□□□□□ -0.61
NOD1-208ENST00000489614 IMMTQ16891 758 aaKnown RBP11.23□□□□□ -0.61
NOD1-208ENST00000489614 CCDC93Q567U6 631 aa11.23□□□□□ -0.61
NOD1-208ENST00000489614 BLOC1S2Q6QNY1 142 aa11.23□□□□□ -0.61
NOD1-208ENST00000489614 MMS22LQ6ZRQ5 1243 aa11.23□□□□□ -0.61
NOD1-208ENST00000489614 ILDR2Q71H61 639 aa11.23□□□□□ -0.61
NOD1-208ENST00000489614 FIBPO43427 364 aa11.23□□□□□ -0.61
NOD1-208ENST00000489614 ECE2O60344 883 aa11.23□□□□□ -0.61
NOD1-208ENST00000489614 PCP11498 1178 aaKnown RBP11.23□□□□□ -0.61
NOD1-208ENST00000489614 NOVP48745 357 aa11.23□□□□□ -0.61
NOD1-208ENST00000489614 PRELPP51888 382 aa11.23□□□□□ -0.61
NOD1-208ENST00000489614 NAIF1Q69YI7 327 aaPredicted RBP11.23□□□□□ -0.61
NOD1-208ENST00000489614 HHIPL2Q6UWX4 724 aa11.23□□□□□ -0.61
NOD1-208ENST00000489614 CYB5R4Q7L1T6 521 aa11.23□□□□□ -0.61
NOD1-208ENST00000489614 ZSCAN31Q96LW9 406 aaPredicted RBP11.23□□□□□ -0.61
NOD1-208ENST00000489614 KCNQ5Q9NR82 932 aa11.23□□□□□ -0.61
NOD1-208ENST00000489614 SH2B1Q9NRF2 756 aaPredicted RBP11.23□□□□□ -0.61
NOD1-208ENST00000489614 SLC4A4Q9Y6R1 1079 aa11.23□□□□□ -0.61
NOD1-208ENST00000489614 H0YHG0 523 aa11.22□□□□□ -0.61
NOD1-208ENST00000489614 NEBLO76041 1014 aa11.22□□□□□ -0.61
NOD1-208ENST00000489614 SARNPP82979 210 aaKnown RBP11.22□□□□□ -0.61
NOD1-208ENST00000489614 SOGA3Q5TF21 947 aa11.22□□□□□ -0.61
NOD1-208ENST00000489614 MIGA1Q8NAN2 632 aa11.22□□□□□ -0.61
NOD1-208ENST00000489614 ABCF2Q9UG63 623 aa11.22□□□□□ -0.61
NOD1-208ENST00000489614 PLIN4Q96Q06 1357 aa11.22□□□□□ -0.61
NOD1-208ENST00000489614 C6orf229H3BNL8 230 aa11.22□□□□□ -0.61
NOD1-208ENST00000489614 SMIM22K7EJ46 135 aa11.22□□□□□ -0.61
NOD1-208ENST00000489614 ORC4O43929 436 aa11.22□□□□□ -0.61
NOD1-208ENST00000489614 DTNBO60941 627 aa11.22□□□□□ -0.61
NOD1-208ENST00000489614 NPM3O75607 178 aaKnown RBP11.22□□□□□ -0.61
NOD1-208ENST00000489614 ANKRD1Q15327 319 aa11.22□□□□□ -0.61
NOD1-208ENST00000489614 SWT1Q5T5J6 900 aaKnown RBP11.22□□□□□ -0.61
NOD1-208ENST00000489614 IGDCC4Q8TDY8 1250 aa11.22□□□□□ -0.61
NOD1-208ENST00000489614 DAGLAQ9Y4D2 1042 aa11.22□□□□□ -0.61
NOD1-208ENST00000489614 ZNF213O14771 459 aa11.22□□□□□ -0.61
NOD1-208ENST00000489614 CAMK4Q16566 473 aa11.22□□□□□ -0.61
NOD1-208ENST00000489614 MAP9Q49MG5 647 aa11.22□□□□□ -0.61
NOD1-208ENST00000489614 MFSD14BQ5SR56 506 aa11.22□□□□□ -0.61
NOD1-208ENST00000489614 SMARCC2Q8TAQ2 1214 aa11.22□□□□□ -0.61
NOD1-208ENST00000489614 SH3RF3Q8TEJ3 882 aaPredicted RBP11.22□□□□□ -0.61
NOD1-208ENST00000489614 SDR42E1Q8WUS8 393 aa11.22□□□□□ -0.61
NOD1-208ENST00000489614 ZBED3Q96IU2 234 aaPredicted RBP11.22□□□□□ -0.61
NOD1-208ENST00000489614 ZC3H12CQ9C0D7 883 aaKnown RBP11.22□□□□□ -0.61
NOD1-208ENST00000489614 HPS5Q9UPZ3 1129 aa11.22□□□□□ -0.61
NOD1-208ENST00000489614 NFKBIEO00221 500 aa11.21□□□□□ -0.61
NOD1-208ENST00000489614 SH2B2O14492 632 aaPredicted RBP11.21□□□□□ -0.61
NOD1-208ENST00000489614 C21orf2O43822 256 aa11.21□□□□□ -0.61
NOD1-208ENST00000489614 PFKFB2O60825 505 aa11.21□□□□□ -0.61
NOD1-208ENST00000489614 SASH3O75995 380 aa11.21□□□□□ -0.61
NOD1-208ENST00000489614 EVX2Q03828 476 aa11.21□□□□□ -0.61
NOD1-208ENST00000489614 PPARAQ07869 468 aa11.21□□□□□ -0.61
NOD1-208ENST00000489614 CCDC144BQ3MJ40 725 aa11.21□□□□□ -0.61
NOD1-208ENST00000489614 AKNAD1Q5T1N1 836 aa11.21□□□□□ -0.61
NOD1-208ENST00000489614 CCDC144CPQ8IYA2 1237 aa11.21□□□□□ -0.61
NOD1-208ENST00000489614 PIM2Q9P1W9 311 aa11.21□□□□□ -0.61
NOD1-208ENST00000489614 VIL1P09327 827 aaKnown RBP11.21□□□□□ -0.62
NOD1-208ENST00000489614 SEC23AQ15436 765 aa11.21□□□□□ -0.62
NOD1-208ENST00000489614 DIXDC1Q155Q3 683 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms