RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 KDM4AO75164 1064 aa9.81□□□□□ -0.84
SF1-218ENST00000489544 TSPY3P0CV98 308 aa9.81□□□□□ -0.84
SF1-218ENST00000489544 TSPY8P0CW00 308 aa9.81□□□□□ -0.84
SF1-218ENST00000489544 ZBTB48P10074 688 aaPredicted RBP9.81□□□□□ -0.84
SF1-218ENST00000489544 EEF2P13639 858 aaKnown RBP9.81□□□□□ -0.84
SF1-218ENST00000489544 ICA1Q05084 483 aa9.81□□□□□ -0.84
SF1-218ENST00000489544 NOGQ13253 232 aa9.81□□□□□ -0.84
SF1-218ENST00000489544 MTMR2Q13614 643 aa9.81□□□□□ -0.84
SF1-218ENST00000489544 MOGSQ13724 837 aa9.81□□□□□ -0.84
SF1-218ENST00000489544 CCL15Q16663 113 aa9.81□□□□□ -0.84
SF1-218ENST00000489544 KIAA1755Q5JYT7 1200 aa9.81□□□□□ -0.84
SF1-218ENST00000489544 CHST3Q7LGC8 479 aa9.81□□□□□ -0.84
SF1-218ENST00000489544 ZNF280CQ8ND82 737 aa9.81□□□□□ -0.84
SF1-218ENST00000489544 BRI3BPQ8WY22 251 aa9.81□□□□□ -0.84
SF1-218ENST00000489544 CHMP4CQ96CF2 233 aa9.81□□□□□ -0.84
SF1-218ENST00000489544 CEP95Q96GE4 821 aa9.81□□□□□ -0.84
SF1-218ENST00000489544 CCDC17Q96LX7 622 aa9.81□□□□□ -0.84
SF1-218ENST00000489544 PTPN18Q99952 460 aa9.81□□□□□ -0.84
SF1-218ENST00000489544 USP26Q9BXU7 913 aa9.81□□□□□ -0.84
SF1-218ENST00000489544 IL17RBQ9NRM6 502 aa9.81□□□□□ -0.84
SF1-218ENST00000489544 KCNH4Q9UQ05 1017 aa9.81□□□□□ -0.84
SF1-218ENST00000489544 ATAD5Q96QE3 1844 aa9.81□□□□□ -0.84
SF1-218ENST00000489544 IGKV6D-41A0A0C4DH26 115 aa9.8□□□□□ -0.84
SF1-218ENST00000489544 IGF2BP3O00425 579 aaKnown RBP eCLIP9.8□□□□□ -0.84
SF1-218ENST00000489544 CXCL11O14625 94 aa9.8□□□□□ -0.84
SF1-218ENST00000489544 REC8O95072 547 aa9.8□□□□□ -0.84
SF1-218ENST00000489544 HMGCS2P54868 508 aa9.8□□□□□ -0.84
SF1-218ENST00000489544 SNAPC2Q13487 334 aa9.8□□□□□ -0.84
SF1-218ENST00000489544 ADCK5Q3MIX3 580 aa9.8□□□□□ -0.84
SF1-218ENST00000489544 CYB5R4Q7L1T6 521 aa9.8□□□□□ -0.84
SF1-218ENST00000489544 NEDD1Q8NHV4 660 aa9.8□□□□□ -0.84
SF1-218ENST00000489544 FEZ1Q99689 392 aa9.8□□□□□ -0.84
SF1-218ENST00000489544 WDR18Q9BV38 432 aa9.8□□□□□ -0.84
SF1-218ENST00000489544 RNF41Q9H4P4 317 aaPredicted RBP9.8□□□□□ -0.84
SF1-218ENST00000489544 ZNF287Q9HBT7 754 aa9.8□□□□□ -0.84
SF1-218ENST00000489544 EMILIN3Q9NT22 766 aa9.8□□□□□ -0.84
SF1-218ENST00000489544 PHIPQ8WWQ0 1821 aa9.79□□□□□ -0.84
SF1-218ENST00000489544 A0A0G2JLL6 359 aaPredicted RBP9.79□□□□□ -0.84
SF1-218ENST00000489544 MANSC4A6NHS7 340 aaPredicted RBP9.79□□□□□ -0.84
SF1-218ENST00000489544 BTBD19C9JJ37 291 aa9.79□□□□□ -0.84
SF1-218ENST00000489544 USP17L10C9JJH3 530 aa9.79□□□□□ -0.84
SF1-218ENST00000489544 CPA1P15085 419 aa9.79□□□□□ -0.84
SF1-218ENST00000489544 HSPA4P34932 840 aa9.79□□□□□ -0.84
SF1-218ENST00000489544 MAP2K2P36507 400 aa9.79□□□□□ -0.84
SF1-218ENST00000489544 GTF2A2P52657 109 aa9.79□□□□□ -0.84
SF1-218ENST00000489544 BACE1P56817 501 aa9.79□□□□□ -0.84
SF1-218ENST00000489544 TREML2Q5T2D2 321 aa9.79□□□□□ -0.84
SF1-218ENST00000489544 GPAT2Q6NUI2 795 aa9.79□□□□□ -0.84
SF1-218ENST00000489544 GADL1Q6ZQY3 521 aa9.79□□□□□ -0.84
SF1-218ENST00000489544 RASGRP2Q7LDG7 609 aa9.79□□□□□ -0.84
SF1-218ENST00000489544 PRRT2Q7Z6L0 340 aaPredicted RBP9.79□□□□□ -0.84
SF1-218ENST00000489544 SPICE1Q8N0Z3 855 aa9.79□□□□□ -0.84
SF1-218ENST00000489544 LRRC47Q8N1G4 583 aaKnown RBP9.79□□□□□ -0.84
SF1-218ENST00000489544 FAM43AQ8N2R8 423 aa9.79□□□□□ -0.84
SF1-218ENST00000489544 ESR2Q92731 530 aa9.79□□□□□ -0.84
SF1-218ENST00000489544 KANSL2Q9H9L4 492 aa9.79□□□□□ -0.84
SF1-218ENST00000489544 AS3MTQ9HBK9 375 aa9.79□□□□□ -0.84
SF1-218ENST00000489544 GPHNQ9NQX3 736 aaPredicted RBP9.79□□□□□ -0.84
SF1-218ENST00000489544 GINM1Q9NU53 330 aa9.79□□□□□ -0.84
SF1-218ENST00000489544 MTMR4Q9NYA4 1195 aa9.79□□□□□ -0.84
SF1-218ENST00000489544 ZSWIM5Q9P217 1185 aa9.79□□□□□ -0.84
SF1-218ENST00000489544 CLIP2Q9UDT6 1046 aa9.79□□□□□ -0.84
SF1-218ENST00000489544 TSKSQ9UJT2 592 aa9.79□□□□□ -0.84
SF1-218ENST00000489544 TAOK2Q9UL54 1235 aa9.79□□□□□ -0.84
SF1-218ENST00000489544 MTMR7Q9Y216 660 aa9.79□□□□□ -0.84
SF1-218ENST00000489544 LAMA4Q16363 1823 aa9.79□□□□□ -0.84
SF1-218ENST00000489544 MYH8P13535 1937 aa9.78□□□□□ -0.84
SF1-218ENST00000489544 PLIN4Q96Q06 1357 aa9.78□□□□□ -0.84
SF1-218ENST00000489544 TESPA1A2RU30 521 aaPredicted RBP9.78□□□□□ -0.84
SF1-218ENST00000489544 RAD21O60216 631 aa9.78□□□□□ -0.84
SF1-218ENST00000489544 CETPP11597 493 aa9.78□□□□□ -0.84
SF1-218ENST00000489544 ANTXR2P58335 489 aa9.78□□□□□ -0.84
SF1-218ENST00000489544 RCSD1Q6JBY9 416 aa9.78□□□□□ -0.84
SF1-218ENST00000489544 IFNL1Q8IU54 200 aa9.78□□□□□ -0.84
SF1-218ENST00000489544 MB21D2Q8IYB1 491 aaPredicted RBP9.78□□□□□ -0.84
SF1-218ENST00000489544 TCEANC2Q96MN5 208 aa9.78□□□□□ -0.84
SF1-218ENST00000489544 NUP88Q99567 741 aaPredicted RBP9.78□□□□□ -0.84
SF1-218ENST00000489544 LRRC2Q9BYS8 371 aa9.78□□□□□ -0.84
SF1-218ENST00000489544 R3HDMLQ9H3Y0 253 aa9.78□□□□□ -0.84
SF1-218ENST00000489544 SENP2Q9HC62 589 aa9.78□□□□□ -0.84
SF1-218ENST00000489544 STX8Q9UNK0 236 aa9.78□□□□□ -0.84
SF1-218ENST00000489544 SNX14Q9Y5W7 946 aa9.78□□□□□ -0.84
SF1-218ENST00000489544 GREB1LQ9C091 1923 aaPredicted RBP9.78□□□□□ -0.84
SF1-218ENST00000489544 TRPA1O75762 1119 aa9.77□□□□□ -0.85
SF1-218ENST00000489544 CAPN15O75808 1086 aa9.77□□□□□ -0.85
SF1-218ENST00000489544 TTLL1O95922 423 aa9.77□□□□□ -0.85
SF1-218ENST00000489544 HSPA1AP0DMV8 641 aaKnown RBP9.77□□□□□ -0.85
SF1-218ENST00000489544 HSPA1BP0DMV9 641 aaKnown RBP9.77□□□□□ -0.85
SF1-218ENST00000489544 PCP11498 1178 aaKnown RBP9.77□□□□□ -0.85
SF1-218ENST00000489544 TM4SF4P48230 202 aa9.77□□□□□ -0.85
SF1-218ENST00000489544 TRDNQ13061 729 aa9.77□□□□□ -0.85
SF1-218ENST00000489544 SH3D19Q5HYK7 790 aa9.77□□□□□ -0.85
SF1-218ENST00000489544 RNF20Q5VTR2 975 aa9.77□□□□□ -0.85
SF1-218ENST00000489544 RALYLQ86SE5 291 aaKnown RBP9.77□□□□□ -0.85
SF1-218ENST00000489544 NCOA7Q8NI08 942 aa9.77□□□□□ -0.85
SF1-218ENST00000489544 KCNB2Q92953 911 aa9.77□□□□□ -0.85
SF1-218ENST00000489544 ZSCAN10Q96SZ4 725 aaPredicted RBP9.77□□□□□ -0.85
SF1-218ENST00000489544 KRT23Q9C075 422 aa9.77□□□□□ -0.85
SF1-218ENST00000489544 KIAA1683Q9H0B3 1180 aa9.77□□□□□ -0.85
SF1-218ENST00000489544 CNNM2Q9H8M5 875 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms