RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 FOXN1O15353 648 aa17.1■□□□□ 0.33
HLA-F-229ENST00000489502 KIAA1211Q6ZU35 1233 aa17.1■□□□□ 0.33
HLA-F-229ENST00000489502 BEGAINQ9BUH8 593 aa17.1■□□□□ 0.33
HLA-F-229ENST00000489502 TBC1D2Q9BYX2 928 aa17.1■□□□□ 0.33
HLA-F-229ENST00000489502 ZNF287Q9HBT7 754 aa17.1■□□□□ 0.33
HLA-F-229ENST00000489502 RNF186Q9NXI6 227 aa17.1■□□□□ 0.33
HLA-F-229ENST00000489502 RBM8AQ9Y5S9 174 aaKnown RBP17.1■□□□□ 0.33
HLA-F-229ENST00000489502 U3KPZ7 1027 aaPredicted RBP17.1■□□□□ 0.33
HLA-F-229ENST00000489502 PLIN4Q96Q06 1357 aa17.1■□□□□ 0.33
HLA-F-229ENST00000489502 MYH4Q9Y623 1939 aa17.09■□□□□ 0.33
HLA-F-229ENST00000489502 ZNF213O14771 459 aa17.09■□□□□ 0.33
HLA-F-229ENST00000489502 TRPA1O75762 1119 aa17.09■□□□□ 0.33
HLA-F-229ENST00000489502 ATP2B2Q01814 1243 aa17.09■□□□□ 0.33
HLA-F-229ENST00000489502 IMMTQ16891 758 aaKnown RBP17.09■□□□□ 0.33
HLA-F-229ENST00000489502 AKNAD1Q5T1N1 836 aa17.09■□□□□ 0.33
HLA-F-229ENST00000489502 REM2Q8IYK8 340 aaPredicted RBP17.09■□□□□ 0.33
HLA-F-229ENST00000489502 ZNF444Q8N0Y2 327 aaPredicted RBP17.09■□□□□ 0.33
HLA-F-229ENST00000489502 NKX2-3Q8TAU0 364 aa17.09■□□□□ 0.33
HLA-F-229ENST00000489502 STAG1Q8WVM7 1258 aa17.09■□□□□ 0.33
HLA-F-229ENST00000489502 CTNNA3Q9UI47 895 aa17.09■□□□□ 0.33
HLA-F-229ENST00000489502 TAF6LQ9Y6J9 622 aa17.09■□□□□ 0.33
HLA-F-229ENST00000489502 A0A1W2PRG0 241 aa17.08■□□□□ 0.32
HLA-F-229ENST00000489502 USP17L10C9JJH3 530 aa17.08■□□□□ 0.32
HLA-F-229ENST00000489502 ORC4O43929 436 aa17.08■□□□□ 0.32
HLA-F-229ENST00000489502 RANBP6O60518 1105 aaKnown RBP17.08■□□□□ 0.32
HLA-F-229ENST00000489502 TSPY3P0CV98 308 aa17.08■□□□□ 0.32
HLA-F-229ENST00000489502 TSPY8P0CW00 308 aa17.08■□□□□ 0.32
HLA-F-229ENST00000489502 BACE1P56817 501 aa17.08■□□□□ 0.32
HLA-F-229ENST00000489502 INHBEP58166 350 aa17.08■□□□□ 0.32
HLA-F-229ENST00000489502 TFAP4Q01664 338 aa17.08■□□□□ 0.32
HLA-F-229ENST00000489502 TREML2Q5T2D2 321 aa17.08■□□□□ 0.32
HLA-F-229ENST00000489502 GPAT2Q6NUI2 795 aa17.08■□□□□ 0.32
HLA-F-229ENST00000489502 IGKV6D-41A0A0C4DH26 115 aa17.07■□□□□ 0.32
HLA-F-229ENST00000489502 TSPY2A6NKD2 308 aa17.07■□□□□ 0.32
HLA-F-229ENST00000489502 CYP21A2P08686 494 aa17.07■□□□□ 0.32
HLA-F-229ENST00000489502 MFSD6Q6ZSS7 791 aa17.07■□□□□ 0.32
HLA-F-229ENST00000489502 MAP4K1Q92918 833 aa17.07■□□□□ 0.32
HLA-F-229ENST00000489502 CEP95Q96GE4 821 aa17.07■□□□□ 0.32
HLA-F-229ENST00000489502 R3HDMLQ9H3Y0 253 aa17.07■□□□□ 0.32
HLA-F-229ENST00000489502 PDHXO00330 501 aa17.06■□□□□ 0.32
HLA-F-229ENST00000489502 NMT2O60551 498 aa17.06■□□□□ 0.32
HLA-F-229ENST00000489502 TBC1D8O95759 1140 aa17.06■□□□□ 0.32
HLA-F-229ENST00000489502 FGRP09769 529 aa17.06■□□□□ 0.32
HLA-F-229ENST00000489502 HSPA8P11142 646 aaKnown RBP17.06■□□□□ 0.32
HLA-F-229ENST00000489502 EEF2P13639 858 aaKnown RBP17.06■□□□□ 0.32
HLA-F-229ENST00000489502 CRHR2Q13324 411 aa17.06■□□□□ 0.32
HLA-F-229ENST00000489502 TAF1CQ15572 869 aaPredicted RBP17.06■□□□□ 0.32
HLA-F-229ENST00000489502 SH3D19Q5HYK7 790 aa17.06■□□□□ 0.32
HLA-F-229ENST00000489502 FASTKD5Q7L8L6 764 aaKnown RBP17.06■□□□□ 0.32
HLA-F-229ENST00000489502 ANKRD23Q86SG2 305 aa17.06■□□□□ 0.32
HLA-F-229ENST00000489502 SIAH1Q8IUQ4 282 aa17.06■□□□□ 0.32
HLA-F-229ENST00000489502 NEDD1Q8NHV4 660 aa17.06■□□□□ 0.32
HLA-F-229ENST00000489502 KIAA1683Q9H0B3 1180 aa17.06■□□□□ 0.32
HLA-F-229ENST00000489502 RNF41Q9H4P4 317 aaPredicted RBP17.06■□□□□ 0.32
HLA-F-229ENST00000489502 KANSL2Q9H9L4 492 aa17.06■□□□□ 0.32
HLA-F-229ENST00000489502 ARHGEF10LQ9HCE6 1279 aa17.06■□□□□ 0.32
HLA-F-229ENST00000489502 SAGE1Q9NXZ1 904 aa17.06■□□□□ 0.32
HLA-F-229ENST00000489502 TMOD4Q9NZQ9 345 aa17.06■□□□□ 0.32
HLA-F-229ENST00000489502 AGTPBP1Q9UPW5 1226 aa17.06■□□□□ 0.32
HLA-F-229ENST00000489502 B4E1Z4 1266 aa17.05■□□□□ 0.32
HLA-F-229ENST00000489502 CA12O43570 354 aa17.05■□□□□ 0.32
HLA-F-229ENST00000489502 OTUD7BQ6GQQ9 843 aa17.05■□□□□ 0.32
HLA-F-229ENST00000489502 USP17L2Q6R6M4 530 aa17.05■□□□□ 0.32
HLA-F-229ENST00000489502 LRRC47Q8N1G4 583 aaKnown RBP17.05■□□□□ 0.32
HLA-F-229ENST00000489502 PROCA1Q8NCQ7 364 aaPredicted RBP17.05■□□□□ 0.32
HLA-F-229ENST00000489502 EMILIN3Q9NT22 766 aa17.05■□□□□ 0.32
HLA-F-229ENST00000489502 C19orf81C9J6K1 198 aa17.04■□□□□ 0.32
HLA-F-229ENST00000489502 ALDH1A1P00352 501 aa17.04■□□□□ 0.32
HLA-F-229ENST00000489502 CYP2C8P10632 490 aa17.04■□□□□ 0.32
HLA-F-229ENST00000489502 PCP11498 1178 aaKnown RBP17.04■□□□□ 0.32
HLA-F-229ENST00000489502 VCAM1P19320 739 aa17.04■□□□□ 0.32
HLA-F-229ENST00000489502 KIAA1755Q5JYT7 1200 aa17.04■□□□□ 0.32
HLA-F-229ENST00000489502 STOX1Q6ZVD7 989 aa17.04■□□□□ 0.32
HLA-F-229ENST00000489502 MTMR4Q9NYA4 1195 aa17.04■□□□□ 0.32
HLA-F-229ENST00000489502 SLC27A2O14975 620 aa17.03■□□□□ 0.32
HLA-F-229ENST00000489502 RAD21O60216 631 aa17.03■□□□□ 0.32
HLA-F-229ENST00000489502 KDM4AO75164 1064 aa17.03■□□□□ 0.32
HLA-F-229ENST00000489502 CTCFP49711 727 aaPredicted RBP17.03■□□□□ 0.32
HLA-F-229ENST00000489502 LBX1P52954 281 aa17.03■□□□□ 0.32
HLA-F-229ENST00000489502 USP14P54578 494 aa17.03■□□□□ 0.32
HLA-F-229ENST00000489502 CREB3L3Q68CJ9 461 aa17.03■□□□□ 0.32
HLA-F-229ENST00000489502 SPICE1Q8N0Z3 855 aa17.03■□□□□ 0.32
HLA-F-229ENST00000489502 ESR2Q92731 530 aa17.03■□□□□ 0.32
HLA-F-229ENST00000489502 C12orf42Q96LP6 360 aa17.03■□□□□ 0.32
HLA-F-229ENST00000489502 SH2D4AQ9H788 454 aa17.03■□□□□ 0.32
HLA-F-229ENST00000489502 ZCCHC17Q9NP64 241 aaKnown RBP17.03■□□□□ 0.32
HLA-F-229ENST00000489502 IL17RBQ9NRM6 502 aa17.03■□□□□ 0.32
HLA-F-229ENST00000489502 TMX2Q9Y320 296 aa17.03■□□□□ 0.32
HLA-F-229ENST00000489502 CASP8AP2Q9UKL3 1982 aa17.02■□□□□ 0.32
HLA-F-229ENST00000489502 ADGRA2Q96PE1 1338 aa17.02■□□□□ 0.32
HLA-F-229ENST00000489502 E7EWF7 191 aa17.02■□□□□ 0.32
HLA-F-229ENST00000489502 PARK7Q99497 189 aaKnown RBP17.02■□□□□ 0.32
HLA-F-229ENST00000489502 ZKSCAN3Q9BRR0 538 aa17.02■□□□□ 0.32
HLA-F-229ENST00000489502 VCPKMTQ9H867 229 aa17.02■□□□□ 0.32
HLA-F-229ENST00000489502 NYAP2Q9P242 653 aa17.02■□□□□ 0.32
HLA-F-229ENST00000489502 CLIP2Q9UDT6 1046 aa17.02■□□□□ 0.32
HLA-F-229ENST00000489502 STX8Q9UNK0 236 aa17.02■□□□□ 0.32
HLA-F-229ENST00000489502 ZSWIM8A7E2V4 1837 aa17.02■□□□□ 0.31
HLA-F-229ENST00000489502 PARP14Q460N5 1801 aa17.01■□□□□ 0.31
HLA-F-229ENST00000489502 TTLL1O95922 423 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms