RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 PORCNQ9H237 461 aa12.65□□□□□ -0.38
CHKB-211ENST00000489453 CABP5Q9NP86 173 aa12.65□□□□□ -0.38
CHKB-211ENST00000489453 EMILIN3Q9NT22 766 aa12.65□□□□□ -0.38
CHKB-211ENST00000489453 SERPINB13Q9UIV8 391 aa12.65□□□□□ -0.38
CHKB-211ENST00000489453 DBNLQ9UJU6 430 aaKnown RBP12.65□□□□□ -0.38
CHKB-211ENST00000489453 IVNS1ABPQ9Y6Y0 642 aa12.65□□□□□ -0.38
CHKB-211ENST00000489453 MAGEA10P43363 369 aaPredicted RBP12.64□□□□□ -0.39
CHKB-211ENST00000489453 MAP2K5Q13163 448 aa12.64□□□□□ -0.39
CHKB-211ENST00000489453 ABCB5Q2M3G0 1257 aa12.64□□□□□ -0.39
CHKB-211ENST00000489453 Q3C1V9 767 aa12.64□□□□□ -0.39
CHKB-211ENST00000489453 CERKLQ49MI3 558 aaPredicted RBP12.64□□□□□ -0.39
CHKB-211ENST00000489453 ERC1Q8IUD2 1116 aa12.64□□□□□ -0.39
CHKB-211ENST00000489453 UBE2OQ9C0C9 1292 aaKnown RBP12.64□□□□□ -0.39
CHKB-211ENST00000489453 TLR7Q9NYK1 1049 aaKnown RBP12.64□□□□□ -0.39
CHKB-211ENST00000489453 RABGAP1Q9Y3P9 1069 aa12.64□□□□□ -0.39
CHKB-211ENST00000489453 MYH7P12883 1935 aa12.63□□□□□ -0.39
CHKB-211ENST00000489453 ZNFX1Q9P2E3 1918 aaKnown RBP12.63□□□□□ -0.39
CHKB-211ENST00000489453 POLR3DP05423 398 aaPredicted RBP12.63□□□□□ -0.39
CHKB-211ENST00000489453 CCND3P30281 292 aaPredicted RBP12.63□□□□□ -0.39
CHKB-211ENST00000489453 CCL14Q16627 93 aa12.63□□□□□ -0.39
CHKB-211ENST00000489453 MORN1Q5T089 497 aa12.63□□□□□ -0.39
CHKB-211ENST00000489453 TMED8Q6PL24 325 aaPredicted RBP12.63□□□□□ -0.39
CHKB-211ENST00000489453 AACSQ86V21 672 aa12.63□□□□□ -0.39
CHKB-211ENST00000489453 TDHQ8IZJ6 230 aa12.63□□□□□ -0.39
CHKB-211ENST00000489453 C12orf42Q96LP6 360 aa12.63□□□□□ -0.39
CHKB-211ENST00000489453 EHD4Q9H223 541 aa12.63□□□□□ -0.39
CHKB-211ENST00000489453 NOP58Q9Y2X3 529 aaKnown RBP12.63□□□□□ -0.39
CHKB-211ENST00000489453 PFASO15067 1338 aa12.62□□□□□ -0.39
CHKB-211ENST00000489453 BAZ2AQ9UIF9 1905 aaKnown RBP12.62□□□□□ -0.39
CHKB-211ENST00000489453 MPHOSPH10O00566 681 aaKnown RBP12.62□□□□□ -0.39
CHKB-211ENST00000489453 VCAM1P19320 739 aa12.62□□□□□ -0.39
CHKB-211ENST00000489453 CNGA1P29973 690 aa12.62□□□□□ -0.39
CHKB-211ENST00000489453 MNX1P50219 401 aaPredicted RBP12.62□□□□□ -0.39
CHKB-211ENST00000489453 ATP2B2Q01814 1243 aa12.62□□□□□ -0.39
CHKB-211ENST00000489453 TATDN1Q6P1N9 297 aa12.62□□□□□ -0.39
CHKB-211ENST00000489453 DEFB123Q8N688 67 aa12.62□□□□□ -0.39
CHKB-211ENST00000489453 USP6NLQ92738 828 aa12.62□□□□□ -0.39
CHKB-211ENST00000489453 EAF2Q96CJ1 260 aaPredicted RBP12.62□□□□□ -0.39
CHKB-211ENST00000489453 EDC3Q96F86 508 aaKnown RBP12.62□□□□□ -0.39
CHKB-211ENST00000489453 KIAA1683Q9H0B3 1180 aa12.62□□□□□ -0.39
CHKB-211ENST00000489453 NDUFB9Q9Y6M9 179 aa12.62□□□□□ -0.39
CHKB-211ENST00000489453 LAMA3Q16787 3333 aa12.62□□□□□ -0.39
CHKB-211ENST00000489453 MAGEB6P1A0A0J9YX57 407 aa12.61□□□□□ -0.39
CHKB-211ENST00000489453 SLC15A5A6NIM6 579 aa12.61□□□□□ -0.39
CHKB-211ENST00000489453 DLL1O00548 723 aa12.61□□□□□ -0.39
CHKB-211ENST00000489453 TTF1Q15361 905 aaPredicted RBP12.61□□□□□ -0.39
CHKB-211ENST00000489453 HSP90AB4PQ58FF6 505 aa12.61□□□□□ -0.39
CHKB-211ENST00000489453 GPR153Q6NV75 609 aa12.61□□□□□ -0.39
CHKB-211ENST00000489453 CATSPERGQ6ZRH7 1159 aa12.61□□□□□ -0.39
CHKB-211ENST00000489453 CRNKL1Q9BZJ0 848 aaKnown RBP12.61□□□□□ -0.39
CHKB-211ENST00000489453 RPAP3Q9H6T3 665 aaPredicted RBP12.61□□□□□ -0.39
CHKB-211ENST00000489453 ZNF236Q9UL36 1845 aa12.6□□□□□ -0.39
CHKB-211ENST00000489453 MSCO60682 206 aa12.6□□□□□ -0.39
CHKB-211ENST00000489453 CNMDO75829 334 aa12.6□□□□□ -0.39
CHKB-211ENST00000489453 PTPREP23469 700 aa12.6□□□□□ -0.39
CHKB-211ENST00000489453 HNRNPUQ00839 825 aaKnown RBP eCLIP12.6□□□□□ -0.39
CHKB-211ENST00000489453 LRRC26Q2I0M4 334 aa12.6□□□□□ -0.39
CHKB-211ENST00000489453 LRIT3Q3SXY7 679 aa12.6□□□□□ -0.39
CHKB-211ENST00000489453 ACER1Q8TDN7 264 aa12.6□□□□□ -0.39
CHKB-211ENST00000489453 LBHD1Q9BQE6 289 aaPredicted RBP12.6□□□□□ -0.39
CHKB-211ENST00000489453 TANGO6Q9C0B7 1094 aa12.6□□□□□ -0.39
CHKB-211ENST00000489453 BCL11AQ9H165 835 aa12.6□□□□□ -0.39
CHKB-211ENST00000489453 ANTXR1Q9H6X2 564 aa12.6□□□□□ -0.39
CHKB-211ENST00000489453 PRKAG2Q9UGJ0 569 aa12.6□□□□□ -0.39
CHKB-211ENST00000489453 EXOC6BQ9Y2D4 811 aa12.6□□□□□ -0.39
CHKB-211ENST00000489453 PLXNA1Q9UIW2 1896 aa12.59□□□□□ -0.39
CHKB-211ENST00000489453 COL6A3P12111 3177 aa12.59□□□□□ -0.39
CHKB-211ENST00000489453 RLFQ13129 1914 aa12.59□□□□□ -0.39
CHKB-211ENST00000489453 COL6A1P12109 1028 aa12.59□□□□□ -0.39
CHKB-211ENST00000489453 SHMT1P34896 483 aa12.59□□□□□ -0.39
CHKB-211ENST00000489453 PLCD1P51178 756 aa12.59□□□□□ -0.39
CHKB-211ENST00000489453 MDM2Q00987 491 aaPredicted RBP12.59□□□□□ -0.39
CHKB-211ENST00000489453 LHX8Q68G74 356 aa12.59□□□□□ -0.39
CHKB-211ENST00000489453 CEP85Q6P2H3 762 aa12.59□□□□□ -0.39
CHKB-211ENST00000489453 DPP9Q86TI2 863 aa12.59□□□□□ -0.39
CHKB-211ENST00000489453 SENP6Q9GZR1 1112 aaPredicted RBP12.59□□□□□ -0.39
CHKB-211ENST00000489453 MCM9Q9NXL9 1143 aa12.59□□□□□ -0.39
CHKB-211ENST00000489453 DDX20Q9UHI6 824 aaKnown RBP12.59□□□□□ -0.39
CHKB-211ENST00000489453 COL11A1P12107 1806 aaPredicted RBP12.59□□□□□ -0.39
CHKB-211ENST00000489453 PARP14Q460N5 1801 aa12.59□□□□□ -0.39
CHKB-211ENST00000489453 A0A0G2JMZ2 1700 aa12.59□□□□□ -0.39
CHKB-211ENST00000489453 SPDYE16A6NNV3 312 aaPredicted RBP12.58□□□□□ -0.4
CHKB-211ENST00000489453 APBB1O00213 710 aa12.58□□□□□ -0.4
CHKB-211ENST00000489453 RLBP1P12271 317 aa12.58□□□□□ -0.4
CHKB-211ENST00000489453 GRB14Q14449 540 aa12.58□□□□□ -0.4
CHKB-211ENST00000489453 SEPT2Q15019 361 aa12.58□□□□□ -0.4
CHKB-211ENST00000489453 SLC9C2Q5TAH2 1124 aa12.58□□□□□ -0.4
CHKB-211ENST00000489453 LBX2Q6XYB7 198 aa12.58□□□□□ -0.4
CHKB-211ENST00000489453 Q7L0L9 218 aa12.58□□□□□ -0.4
CHKB-211ENST00000489453 DNAJC2Q99543 621 aaKnown RBP12.58□□□□□ -0.4
CHKB-211ENST00000489453 IL1RAPL2Q9NP60 686 aa12.58□□□□□ -0.4
CHKB-211ENST00000489453 SLC5A4Q9NY91 659 aa12.58□□□□□ -0.4
CHKB-211ENST00000489453 HOXC10Q9NYD6 342 aa12.58□□□□□ -0.4
CHKB-211ENST00000489453 FLRT1Q9NZU1 646 aa12.58□□□□□ -0.4
CHKB-211ENST00000489453 BTBD7Q9P203 1132 aa12.58□□□□□ -0.4
CHKB-211ENST00000489453 LTBP2Q14767 1821 aa12.58□□□□□ -0.4
CHKB-211ENST00000489453 DNAH12Q6ZR08 3092 aa12.57□□□□□ -0.4
CHKB-211ENST00000489453 MYCNP04198 464 aaPredicted RBP12.57□□□□□ -0.4
CHKB-211ENST00000489453 IFIT2P09913 472 aaKnown RBP12.57□□□□□ -0.4
CHKB-211ENST00000489453 PDE6AP16499 860 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms