RNA–Protein interactions for RNA: ENST00000489240.1

C9orf16-203, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 3

Gene C9orf16, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-203ENST00000489240 ZNF274Q96GC6 653 aaPredicted RBP21.35■■□□□ 1.01
C9orf16-203ENST00000489240 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.35■■□□□ 1.01
C9orf16-203ENST00000489240 KANSL2Q9H9L4 492 aa21.35■■□□□ 1.01
C9orf16-203ENST00000489240 MTMR4Q9NYA4 1195 aa21.35■■□□□ 1.01
C9orf16-203ENST00000489240 DAXXQ9UER7 740 aaPredicted RBP21.35■■□□□ 1.01
C9orf16-203ENST00000489240 KLF18A0A0U1RQI7 1052 aa21.34■■□□□ 1.01
C9orf16-203ENST00000489240 GH2P01242 217 aa21.34■■□□□ 1.01
C9orf16-203ENST00000489240 ASNSP08243 561 aa21.34■■□□□ 1.01
C9orf16-203ENST00000489240 RRP1BQ14684 758 aaKnown RBP21.34■■□□□ 1.01
C9orf16-203ENST00000489240 RCSD1Q6JBY9 416 aa21.34■■□□□ 1.01
C9orf16-203ENST00000489240 TMX3Q96JJ7 454 aa21.34■■□□□ 1.01
C9orf16-203ENST00000489240 LARP6Q9BRS8 491 aaKnown RBP21.34■■□□□ 1.01
C9orf16-203ENST00000489240 KAT14Q9H8E8 782 aa21.34■■□□□ 1.01
C9orf16-203ENST00000489240 ZBTB21Q9ULJ3 1066 aa21.34■■□□□ 1.01
C9orf16-203ENST00000489240 TPCN1Q9ULQ1 816 aa21.34■■□□□ 1.01
C9orf16-203ENST00000489240 STX8Q9UNK0 236 aa21.34■■□□□ 1.01
C9orf16-203ENST00000489240 SLC12A7Q9Y666 1083 aa21.34■■□□□ 1.01
C9orf16-203ENST00000489240 TTLL1O95922 423 aa21.33■■□□□ 1.01
C9orf16-203ENST00000489240 NOVP48745 357 aa21.33■■□□□ 1.01
C9orf16-203ENST00000489240 SEPT2Q15019 361 aa21.33■■□□□ 1.01
C9orf16-203ENST00000489240 CHADLQ6NUI6 762 aa21.33■■□□□ 1.01
C9orf16-203ENST00000489240 CHMP4CQ96CF2 233 aa21.33■■□□□ 1.01
C9orf16-203ENST00000489240 NYAP2Q9P242 653 aa21.33■■□□□ 1.01
C9orf16-203ENST00000489240 BRPF3Q9ULD4 1205 aa21.33■■□□□ 1.01
C9orf16-203ENST00000489240 NAP1L2Q9ULW6 460 aaPredicted RBP21.33■■□□□ 1.01
C9orf16-203ENST00000489240 USP2O75604 605 aaPredicted RBP21.32■■□□□ 1
C9orf16-203ENST00000489240 TOP1P11387 765 aaKnown RBP21.32■■□□□ 1
C9orf16-203ENST00000489240 RAB3GAP1Q15042 981 aa21.32■■□□□ 1
C9orf16-203ENST00000489240 APOA5Q6Q788 366 aa21.32■■□□□ 1
C9orf16-203ENST00000489240 DLK2Q6UY11 383 aa21.32■■□□□ 1
C9orf16-203ENST00000489240 CATIPQ7Z7H3 387 aa21.32■■□□□ 1
C9orf16-203ENST00000489240 KLRG1Q96E93 195 aa21.32■■□□□ 1
C9orf16-203ENST00000489240 WRNIP1Q96S55 665 aa21.32■■□□□ 1
C9orf16-203ENST00000489240 SENP2Q9HC62 589 aa21.32■■□□□ 1
C9orf16-203ENST00000489240 PHIPQ8WWQ0 1821 aa21.32■■□□□ 1
C9orf16-203ENST00000489240 GOLGA8BA8MQT2 603 aa21.31■■□□□ 1
C9orf16-203ENST00000489240 ZBTB43O43298 467 aa21.31■■□□□ 1
C9orf16-203ENST00000489240 CALM1P0DP23 149 aa21.31■■□□□ 1
C9orf16-203ENST00000489240 CALM2P0DP24 149 aa21.31■■□□□ 1
C9orf16-203ENST00000489240 CALM3P0DP25 149 aa21.31■■□□□ 1
C9orf16-203ENST00000489240 PDIA3P30101 505 aaKnown RBP21.31■■□□□ 1
C9orf16-203ENST00000489240 GUCY1A2P33402 732 aa21.31■■□□□ 1
C9orf16-203ENST00000489240 IREB2P48200 963 aaKnown RBP21.31■■□□□ 1
C9orf16-203ENST00000489240 RCAN1P53805 252 aa21.31■■□□□ 1
C9orf16-203ENST00000489240 JAG1P78504 1218 aa21.31■■□□□ 1
C9orf16-203ENST00000489240 ICA1Q05084 483 aa21.31■■□□□ 1
C9orf16-203ENST00000489240 ME3Q16798 604 aa21.31■■□□□ 1
C9orf16-203ENST00000489240 ZNF654Q8IZM8 581 aa21.31■■□□□ 1
C9orf16-203ENST00000489240 IPO9Q96P70 1041 aaKnown RBP21.31■■□□□ 1
C9orf16-203ENST00000489240 TMEM47Q9BQJ4 181 aa21.31■■□□□ 1
C9orf16-203ENST00000489240 SLKQ9H2G2 1235 aaPredicted RBP21.31■■□□□ 1
C9orf16-203ENST00000489240 CLIP2Q9UDT6 1046 aa21.31■■□□□ 1
C9orf16-203ENST00000489240 PFKFB2O60825 505 aa21.3■■□□□ 1
C9orf16-203ENST00000489240 DDAH1O94760 285 aa21.3■■□□□ 1
C9orf16-203ENST00000489240 INPP5BP32019 993 aa21.3■■□□□ 1
C9orf16-203ENST00000489240 PRKG1Q13976 671 aa21.3■■□□□ 1
C9orf16-203ENST00000489240 SHROOM1Q2M3G4 852 aaPredicted RBP21.3■■□□□ 1
C9orf16-203ENST00000489240 SCYL3Q8IZE3 742 aa21.3■■□□□ 1
C9orf16-203ENST00000489240 PNMA1Q8ND90 353 aa21.3■■□□□ 1
C9orf16-203ENST00000489240 MKL1Q969V6 931 aa21.3■■□□□ 1
C9orf16-203ENST00000489240 ARHGEF10LQ9HCE6 1279 aa21.3■■□□□ 1
C9orf16-203ENST00000489240 LARGE1O95461 756 aa21.29■■□□□ 1
C9orf16-203ENST00000489240 EEF2P13639 858 aaKnown RBP21.29■■□□□ 1
C9orf16-203ENST00000489240 MAP3K9P80192 1104 aa21.29■■□□□ 1
C9orf16-203ENST00000489240 ATP2B2Q01814 1243 aa21.29■■□□□ 1
C9orf16-203ENST00000489240 STK3Q13188 491 aa21.29■■□□□ 1
C9orf16-203ENST00000489240 TTLL12Q14166 644 aaPredicted RBP21.29■■□□□ 1
C9orf16-203ENST00000489240 PPP2R5BQ15173 497 aa21.29■■□□□ 1
C9orf16-203ENST00000489240 NOL9Q5SY16 702 aaKnown RBP21.29■■□□□ 1
C9orf16-203ENST00000489240 ARMC9Q7Z3E5 817 aa21.29■■□□□ 1
C9orf16-203ENST00000489240 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.29■■□□□ 12e-9■□□□□ 8.9
C9orf16-203ENST00000489240 PICK1Q9NRD5 415 aa21.29■■□□□ 1
C9orf16-203ENST00000489240 SYNPO2Q9UMS6 1093 aa21.29■■□□□ 1
C9orf16-203ENST00000489240 MYH6P13533 1939 aa21.28■■□□□ 1
C9orf16-203ENST00000489240 TRAF5O00463 557 aa21.28■■□□□ 1
C9orf16-203ENST00000489240 HSP90AA1P07900 732 aaKnown RBP21.28■■□□□ 1
C9orf16-203ENST00000489240 METAP2P50579 478 aaKnown RBP eCLIP21.28■■□□□ 17e-7■■□□□ 11.8
C9orf16-203ENST00000489240 CUL4AQ13619 759 aa21.28■■□□□ 1
C9orf16-203ENST00000489240 MAP3K11Q16584 847 aa21.28■■□□□ 1
C9orf16-203ENST00000489240 CLEC10AQ8IUN9 316 aa21.28■■□□□ 1
C9orf16-203ENST00000489240 ZKSCAN4Q969J2 545 aaPredicted RBP21.28■■□□□ 1
C9orf16-203ENST00000489240 MAP3K14Q99558 947 aa21.28■■□□□ 1
C9orf16-203ENST00000489240 SH2D4AQ9H788 454 aa21.28■■□□□ 1
C9orf16-203ENST00000489240 FZD1Q9UP38 647 aa21.28■■□□□ 1
C9orf16-203ENST00000489240 NID2Q14112 1375 aa21.27■■□□□ 1
C9orf16-203ENST00000489240 GOLGA8AA7E2F4 631 aa21.27■■□□□ 1
C9orf16-203ENST00000489240 USP17L5A8MUK1 530 aa21.27■■□□□ 1
C9orf16-203ENST00000489240 DHX16O60231 1041 aaKnown RBP21.27■■□□□ 1
C9orf16-203ENST00000489240 FKBP1BP68106 108 aa21.27■■□□□ 1
C9orf16-203ENST00000489240 MICU3Q86XE3 530 aa21.27■■□□□ 1
C9orf16-203ENST00000489240 NUP133Q8WUM0 1156 aa21.27■■□□□ 1
C9orf16-203ENST00000489240 GTF3C6Q969F1 213 aa21.27■■□□□ 1
C9orf16-203ENST00000489240 HPS5Q9UPZ3 1129 aa21.27■■□□□ 1
C9orf16-203ENST00000489240 CSADQ9Y600 493 aa21.27■■□□□ 1
C9orf16-203ENST00000489240 CCDC196A0A1B0GTZ2 297 aa21.26■□□□□ 0.99
C9orf16-203ENST00000489240 KIF3CO14782 793 aa21.26■□□□□ 0.99
C9orf16-203ENST00000489240 CCT2P78371 535 aaKnown RBP21.26■□□□□ 0.99
C9orf16-203ENST00000489240 TROAPQ12815 778 aa21.26■□□□□ 0.99
C9orf16-203ENST00000489240 CCDC83Q8IWF9 413 aa21.26■□□□□ 0.99
C9orf16-203ENST00000489240 ANKRD13AQ8IZ07 590 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms