RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 MRPL42Q9Y6G3 142 aaKnown RBP4.72□□□□□ -1.65
PRPF4-203ENST00000488937 CCDC194A0A1B0GVG4 234 aa4.71□□□□□ -1.66
PRPF4-203ENST00000488937 EREGO14944 169 aa4.71□□□□□ -1.66
PRPF4-203ENST00000488937 CLSTN1O94985 981 aa4.71□□□□□ -1.66
PRPF4-203ENST00000488937 OXCT1P55809 520 aa4.71□□□□□ -1.66
PRPF4-203ENST00000488937 ANAPC15P60006 121 aa4.71□□□□□ -1.66
PRPF4-203ENST00000488937 PLCB3Q01970 1234 aa4.71□□□□□ -1.66
PRPF4-203ENST00000488937 PSMD2Q13200 908 aa4.71□□□□□ -1.66
PRPF4-203ENST00000488937 CDK5R2Q13319 367 aa4.71□□□□□ -1.66
PRPF4-203ENST00000488937 AP3B2Q13367 1082 aa4.71□□□□□ -1.66
PRPF4-203ENST00000488937 PDE3AQ14432 1141 aa4.71□□□□□ -1.66
PRPF4-203ENST00000488937 GORABQ5T7V8 394 aa4.71□□□□□ -1.66
PRPF4-203ENST00000488937 RNF187Q5TA31 235 aaPredicted RBP4.71□□□□□ -1.66
PRPF4-203ENST00000488937 SLC26A8Q96RN1 970 aa4.71□□□□□ -1.66
PRPF4-203ENST00000488937 KCNK12Q9HB15 430 aa4.71□□□□□ -1.66
PRPF4-203ENST00000488937 LGR6Q9HBX8 967 aa4.71□□□□□ -1.66
PRPF4-203ENST00000488937 ZFYVE28Q9HCC9 887 aa4.71□□□□□ -1.66
PRPF4-203ENST00000488937 PCDH12Q9NPG4 1184 aa4.71□□□□□ -1.66
PRPF4-203ENST00000488937 COL4A3BPQ9Y5P4 624 aa4.71□□□□□ -1.66
PRPF4-203ENST00000488937 MAP4K4O95819 1239 aaPredicted RBP4.7□□□□□ -1.66
PRPF4-203ENST00000488937 CTSHP09668 335 aa4.7□□□□□ -1.66
PRPF4-203ENST00000488937 SLFN14P0C7P3 912 aa4.7□□□□□ -1.66
PRPF4-203ENST00000488937 MAPK8P45983 427 aa4.7□□□□□ -1.66
PRPF4-203ENST00000488937 GJA8P48165 433 aa4.7□□□□□ -1.66
PRPF4-203ENST00000488937 ZP2Q05996 745 aa4.7□□□□□ -1.66
PRPF4-203ENST00000488937 BMS1Q14692 1282 aaKnown RBP4.7□□□□□ -1.66
PRPF4-203ENST00000488937 ENOX2Q16206 610 aaKnown RBP4.7□□□□□ -1.66
PRPF4-203ENST00000488937 NFE2L2Q16236 605 aa4.7□□□□□ -1.66
PRPF4-203ENST00000488937 PLEKHG6Q3KR16 790 aa4.7□□□□□ -1.66
PRPF4-203ENST00000488937 TCERG1LQ5VWI1 586 aa4.7□□□□□ -1.66
PRPF4-203ENST00000488937 CYFIP1Q7L576 1253 aa4.7□□□□□ -1.66
PRPF4-203ENST00000488937 ZNF654Q8IZM8 581 aa4.7□□□□□ -1.66
PRPF4-203ENST00000488937 SLC16A11Q8NCK7 471 aa4.7□□□□□ -1.66
PRPF4-203ENST00000488937 MKL1Q969V6 931 aa4.7□□□□□ -1.66
PRPF4-203ENST00000488937 CCDC120Q96HB5 630 aa4.7□□□□□ -1.66
PRPF4-203ENST00000488937 TNKS2Q9H2K2 1166 aa4.7□□□□□ -1.66
PRPF4-203ENST00000488937 CHPF2Q9P2E5 772 aa4.7□□□□□ -1.66
PRPF4-203ENST00000488937 WWC3Q9ULE0 1092 aa4.7□□□□□ -1.66
PRPF4-203ENST00000488937 INPP5FQ9Y2H2 1132 aa4.7□□□□□ -1.66
PRPF4-203ENST00000488937 A0A096LPE4 126 aa4.69□□□□□ -1.66
PRPF4-203ENST00000488937 A0A1W2PPZ6 126 aa4.69□□□□□ -1.66
PRPF4-203ENST00000488937 STK10O94804 968 aaKnown RBP4.69□□□□□ -1.66
PRPF4-203ENST00000488937 NEFLP07196 543 aa4.69□□□□□ -1.66
PRPF4-203ENST00000488937 HMGA2P52926 109 aa4.69□□□□□ -1.66
PRPF4-203ENST00000488937 ZNF394Q53GI3 561 aa4.69□□□□□ -1.66
PRPF4-203ENST00000488937 PLEKHG4Q58EX7 1191 aa4.69□□□□□ -1.66
PRPF4-203ENST00000488937 TAF7LQ5H9L4 462 aa4.69□□□□□ -1.66
PRPF4-203ENST00000488937 NBPF6Q5VWK0 638 aa4.69□□□□□ -1.66
PRPF4-203ENST00000488937 PEAR1Q5VY43 1037 aaPredicted RBP4.69□□□□□ -1.66
PRPF4-203ENST00000488937 GALNT12Q8IXK2 581 aa4.69□□□□□ -1.66
PRPF4-203ENST00000488937 SMYD4Q8IYR2 804 aaPredicted RBP4.69□□□□□ -1.66
PRPF4-203ENST00000488937 ZNF526Q8TF50 670 aaPredicted RBP4.69□□□□□ -1.66
PRPF4-203ENST00000488937 STAG1Q8WVM7 1258 aa4.69□□□□□ -1.66
PRPF4-203ENST00000488937 NBPF4Q96M43 638 aa4.69□□□□□ -1.66
PRPF4-203ENST00000488937 SETDB2Q96T68 719 aa4.69□□□□□ -1.66
PRPF4-203ENST00000488937 GPR20Q99678 358 aa4.69□□□□□ -1.66
PRPF4-203ENST00000488937 WDR18Q9BV38 432 aa4.69□□□□□ -1.66
PRPF4-203ENST00000488937 DNAJC25Q9H1X3 360 aa4.69□□□□□ -1.66
PRPF4-203ENST00000488937 IFT57Q9NWB7 429 aa4.69□□□□□ -1.66
PRPF4-203ENST00000488937 GTF2IRD1Q9UHL9 959 aa4.69□□□□□ -1.66
PRPF4-203ENST00000488937 SASH1O94885 1247 aa4.68□□□□□ -1.66
PRPF4-203ENST00000488937 B3GALT4O96024 378 aa4.68□□□□□ -1.66
PRPF4-203ENST00000488937 CTSBP07858 339 aa4.68□□□□□ -1.66
PRPF4-203ENST00000488937 ATF4P18848 351 aaPredicted RBP4.68□□□□□ -1.66
PRPF4-203ENST00000488937 TNFRSF1AP19438 455 aa4.68□□□□□ -1.66
PRPF4-203ENST00000488937 GNA15P30679 374 aa4.68□□□□□ -1.66
PRPF4-203ENST00000488937 RGS19P49795 217 aa4.68□□□□□ -1.66
PRPF4-203ENST00000488937 ATP2B2Q01814 1243 aa4.68□□□□□ -1.66
PRPF4-203ENST00000488937 ID3Q02535 119 aa4.68□□□□□ -1.66
PRPF4-203ENST00000488937 ORC1Q13415 861 aa4.68□□□□□ -1.66
PRPF4-203ENST00000488937 ZNF423Q2M1K9 1284 aa4.68□□□□□ -1.66
PRPF4-203ENST00000488937 HSP90AB2PQ58FF8 381 aa4.68□□□□□ -1.66
PRPF4-203ENST00000488937 ALG1LQ6GMV1 187 aa4.68□□□□□ -1.66
PRPF4-203ENST00000488937 SMC5Q8IY18 1101 aa4.68□□□□□ -1.66
PRPF4-203ENST00000488937 BAHD1Q8TBE0 780 aaPredicted RBP4.68□□□□□ -1.66
PRPF4-203ENST00000488937 MORC4Q8TE76 937 aa4.68□□□□□ -1.66
PRPF4-203ENST00000488937 DUSP23Q9BVJ7 150 aa4.68□□□□□ -1.66
PRPF4-203ENST00000488937 PCOLCE2Q9UKZ9 415 aa4.68□□□□□ -1.66
PRPF4-203ENST00000488937 OTOL1A6NHN0 477 aaPredicted RBP4.67□□□□□ -1.66
PRPF4-203ENST00000488937 TMPRSS2O15393 492 aa4.67□□□□□ -1.66
PRPF4-203ENST00000488937 CPNE3O75131 537 aaKnown RBP4.67□□□□□ -1.66
PRPF4-203ENST00000488937 ITIH2P19823 946 aa4.67□□□□□ -1.66
PRPF4-203ENST00000488937 CLCN7P51798 805 aa4.67□□□□□ -1.66
PRPF4-203ENST00000488937 USPL1Q5W0Q7 1092 aa4.67□□□□□ -1.66
PRPF4-203ENST00000488937 FILIP1Q7Z7B0 1213 aa4.67□□□□□ -1.66
PRPF4-203ENST00000488937 USP48Q86UV5 1035 aa4.67□□□□□ -1.66
PRPF4-203ENST00000488937 CCNJLQ8IV13 435 aa4.67□□□□□ -1.66
PRPF4-203ENST00000488937 MRFAP1L1Q96HT8 127 aa4.67□□□□□ -1.66
PRPF4-203ENST00000488937 TRIM56Q9BRZ2 755 aaKnown RBP4.67□□□□□ -1.66
PRPF4-203ENST00000488937 NIF3L1Q9GZT8 377 aa4.67□□□□□ -1.66
PRPF4-203ENST00000488937 TMX1Q9H3N1 280 aa4.67□□□□□ -1.66
PRPF4-203ENST00000488937 PPP1R9AQ9ULJ8 1098 aa4.67□□□□□ -1.66
PRPF4-203ENST00000488937 PLAGL2Q9UPG8 496 aa4.67□□□□□ -1.66
PRPF4-203ENST00000488937 PRKAB1Q9Y478 270 aa4.67□□□□□ -1.66
PRPF4-203ENST00000488937 PCDHGB7Q9Y5F8 929 aa4.67□□□□□ -1.66
PRPF4-203ENST00000488937 AK5Q9Y6K8 562 aa4.67□□□□□ -1.66
PRPF4-203ENST00000488937 U3KQE9 123 aa4.67□□□□□ -1.66
PRPF4-203ENST00000488937 METTL12A8MUP2 240 aa4.66□□□□□ -1.66
PRPF4-203ENST00000488937 IGF2BP3O00425 579 aaKnown RBP eCLIP4.66□□□□□ -1.66
PRPF4-203ENST00000488937 EIF1AYO14602 144 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms