RNA–Protein interactions for RNA: ENST00000488828.1

NUP98-212, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-212ENST00000488828 CXCL11O14625 94 aa13.18□□□□□ -0.3
NUP98-212ENST00000488828 GH2P01242 217 aa13.18□□□□□ -0.3
NUP98-212ENST00000488828 SDSP20132 328 aa13.18□□□□□ -0.3
NUP98-212ENST00000488828 RRP1BQ14684 758 aaKnown RBP13.18□□□□□ -0.3
NUP98-212ENST00000488828 RAB3GAP1Q15042 981 aa13.18□□□□□ -0.3
NUP98-212ENST00000488828 ABCB5Q2M3G0 1257 aa13.18□□□□□ -0.3
NUP98-212ENST00000488828 MCMDC2Q4G0Z9 681 aa13.18□□□□□ -0.3
NUP98-212ENST00000488828 C12orf60Q5U649 245 aa13.18□□□□□ -0.3
NUP98-212ENST00000488828 CTR9Q6PD62 1173 aa13.18□□□□□ -0.3
NUP98-212ENST00000488828 BRI3BPQ8WY22 251 aa13.18□□□□□ -0.3
NUP98-212ENST00000488828 FAM227BQ96M60 508 aa13.18□□□□□ -0.3
NUP98-212ENST00000488828 PTPN18Q99952 460 aa13.18□□□□□ -0.3
NUP98-212ENST00000488828 AS3MTQ9HBK9 375 aa13.18□□□□□ -0.3
NUP98-212ENST00000488828 HELLSQ9NRZ9 838 aa13.18□□□□□ -0.3
NUP98-212ENST00000488828 AFG3L2Q9Y4W6 797 aa13.18□□□□□ -0.3
NUP98-212ENST00000488828 HIP1O00291 1037 aa13.17□□□□□ -0.3
NUP98-212ENST00000488828 NMIQ13287 307 aaPredicted RBP13.17□□□□□ -0.3
NUP98-212ENST00000488828 TTC22Q5TAA0 569 aa13.17□□□□□ -0.3
NUP98-212ENST00000488828 TATDN1Q6P1N9 297 aa13.17□□□□□ -0.3
NUP98-212ENST00000488828 GIMAP6Q6P9H5 292 aa13.17□□□□□ -0.3
NUP98-212ENST00000488828 CWC27Q6UX04 472 aaKnown RBP13.17□□□□□ -0.3
NUP98-212ENST00000488828 FASTKD5Q7L8L6 764 aaKnown RBP13.17□□□□□ -0.3
NUP98-212ENST00000488828 METTL16Q86W50 562 aaKnown RBP13.17□□□□□ -0.3
NUP98-212ENST00000488828 IFNL3Q8IZI9 196 aa13.17□□□□□ -0.3
NUP98-212ENST00000488828 ZNF280CQ8ND82 737 aa13.17□□□□□ -0.3
NUP98-212ENST00000488828 TMC2Q8TDI7 906 aa13.17□□□□□ -0.3
NUP98-212ENST00000488828 NAPBQ9H115 298 aa13.17□□□□□ -0.3
NUP98-212ENST00000488828 DNAJC18Q9H819 358 aa13.17□□□□□ -0.3
NUP98-212ENST00000488828 MKNK2Q9HBH9 465 aa13.17□□□□□ -0.3
NUP98-212ENST00000488828 ARPP21Q9UBL0 812 aaPredicted RBP13.17□□□□□ -0.3
NUP98-212ENST00000488828 SWAP70Q9UH65 585 aa13.17□□□□□ -0.3
NUP98-212ENST00000488828 TESPA1A2RU30 521 aaPredicted RBP13.16□□□□□ -0.3
NUP98-212ENST00000488828 BTBD19C9JJ37 291 aa13.16□□□□□ -0.3
NUP98-212ENST00000488828 SLC3A2P08195 630 aaKnown RBP13.16□□□□□ -0.3
NUP98-212ENST00000488828 MFAP1P55081 439 aaKnown RBP13.16□□□□□ -0.3
NUP98-212ENST00000488828 TAF1CQ15572 869 aaPredicted RBP13.16□□□□□ -0.3
NUP98-212ENST00000488828 COL13A1Q5TAT6 717 aaPredicted RBP13.16□□□□□ -0.3
NUP98-212ENST00000488828 TICAM2Q86XR7 235 aa13.16□□□□□ -0.3
NUP98-212ENST00000488828 FAM43AQ8N2R8 423 aa13.16□□□□□ -0.3
NUP98-212ENST00000488828 SLC44A5Q8NCS7 719 aa13.16□□□□□ -0.3
NUP98-212ENST00000488828 ZFYVE28Q9HCC9 887 aa13.16□□□□□ -0.3
NUP98-212ENST00000488828 PRDM10Q9NQV6 1147 aa13.16□□□□□ -0.3
NUP98-212ENST00000488828 ZBTB21Q9ULJ3 1066 aa13.16□□□□□ -0.3
NUP98-212ENST00000488828 KCNH4Q9UQ05 1017 aa13.16□□□□□ -0.3
NUP98-212ENST00000488828 A0A0D9SFI3 127 aa13.15□□□□□ -0.3
NUP98-212ENST00000488828 PDHXO00330 501 aa13.15□□□□□ -0.3
NUP98-212ENST00000488828 SHMT1P34896 483 aa13.15□□□□□ -0.3
NUP98-212ENST00000488828 CDK8P49336 464 aa13.15□□□□□ -0.3
NUP98-212ENST00000488828 JAG1P78504 1218 aa13.15□□□□□ -0.3
NUP98-212ENST00000488828 CRHR2Q13324 411 aa13.15□□□□□ -0.3
NUP98-212ENST00000488828 SHROOM1Q2M3G4 852 aaPredicted RBP13.15□□□□□ -0.3
NUP98-212ENST00000488828 FEZ1Q99689 392 aa13.15□□□□□ -0.3
NUP98-212ENST00000488828 TBC1D2Q9BYX2 928 aa13.15□□□□□ -0.3
NUP98-212ENST00000488828 GINM1Q9NU53 330 aa13.15□□□□□ -0.3
NUP98-212ENST00000488828 TMOD4Q9NZQ9 345 aa13.15□□□□□ -0.3
NUP98-212ENST00000488828 MYH1P12882 1939 aa13.15□□□□□ -0.3
NUP98-212ENST00000488828 OTOFQ9HC10 1997 aa13.14□□□□□ -0.31
NUP98-212ENST00000488828 MYH7P12883 1935 aa13.14□□□□□ -0.31
NUP98-212ENST00000488828 USP17L10C9JJH3 530 aa13.14□□□□□ -0.31
NUP98-212ENST00000488828 SMIM22K7EJ46 135 aa13.14□□□□□ -0.31
NUP98-212ENST00000488828 GPR25O00155 361 aa13.14□□□□□ -0.31
NUP98-212ENST00000488828 HMGCS2P54868 508 aa13.14□□□□□ -0.31
NUP98-212ENST00000488828 ATP2B2Q01814 1243 aa13.14□□□□□ -0.31
NUP98-212ENST00000488828 GABPAQ06546 454 aa13.14□□□□□ -0.31
NUP98-212ENST00000488828 MTMR2Q13614 643 aa13.14□□□□□ -0.31
NUP98-212ENST00000488828 ZYXQ15942 572 aaKnown RBP13.14□□□□□ -0.31
NUP98-212ENST00000488828 SBK1Q52WX2 424 aa13.14□□□□□ -0.31
NUP98-212ENST00000488828 SMYD5Q6GMV2 418 aa13.14□□□□□ -0.31
NUP98-212ENST00000488828 ANKRD23Q86SG2 305 aa13.14□□□□□ -0.31
NUP98-212ENST00000488828 ZNF444Q8N0Y2 327 aaPredicted RBP13.14□□□□□ -0.31
NUP98-212ENST00000488828 R3HDMLQ9H3Y0 253 aa13.14□□□□□ -0.31
NUP98-212ENST00000488828 ZNF287Q9HBT7 754 aa13.14□□□□□ -0.31
NUP98-212ENST00000488828 THSD7BQ9C0I4 1608 aa13.13□□□□□ -0.31
NUP98-212ENST00000488828 CDK5RAP2Q96SN8 1893 aa13.13□□□□□ -0.31
NUP98-212ENST00000488828 A0A0G2JLL6 359 aaPredicted RBP13.13□□□□□ -0.31
NUP98-212ENST00000488828 SNPHO15079 494 aa13.13□□□□□ -0.31
NUP98-212ENST00000488828 SEPT2Q15019 361 aa13.13□□□□□ -0.31
NUP98-212ENST00000488828 VPS53Q5VIR6 699 aa13.13□□□□□ -0.31
NUP98-212ENST00000488828 C16orf86Q6ZW13 317 aa13.13□□□□□ -0.31
NUP98-212ENST00000488828 PRRT2Q7Z6L0 340 aaPredicted RBP13.13□□□□□ -0.31
NUP98-212ENST00000488828 SKAP1Q86WV1 359 aa13.13□□□□□ -0.31
NUP98-212ENST00000488828 CCDC17Q96LX7 622 aa13.13□□□□□ -0.31
NUP98-212ENST00000488828 WDR18Q9BV38 432 aa13.13□□□□□ -0.31
NUP98-212ENST00000488828 EPB41L4AQ9HCS5 686 aaPredicted RBP13.13□□□□□ -0.31
NUP98-212ENST00000488828 PPP4R2Q9NY27 417 aa13.13□□□□□ -0.31
NUP98-212ENST00000488828 FOCADQ5VW36 1801 aa13.12□□□□□ -0.31
NUP98-212ENST00000488828 C19orf81C9J6K1 198 aa13.12□□□□□ -0.31
NUP98-212ENST00000488828 RAD21O60216 631 aa13.12□□□□□ -0.31
NUP98-212ENST00000488828 FKTNO75072 461 aa13.12□□□□□ -0.31
NUP98-212ENST00000488828 PRDM1O75626 825 aa13.12□□□□□ -0.31
NUP98-212ENST00000488828 AKR1B1P15121 316 aa13.12□□□□□ -0.31
NUP98-212ENST00000488828 GSPT1P15170 499 aaKnown RBP13.12□□□□□ -0.31
NUP98-212ENST00000488828 BACE1P56817 501 aa13.12□□□□□ -0.31
NUP98-212ENST00000488828 PDE4BQ07343 736 aa13.12□□□□□ -0.31
NUP98-212ENST00000488828 PABPC4Q13310 644 aaKnown RBP eCLIP13.12□□□□□ -0.31
NUP98-212ENST00000488828 TMEM179Q6ZVK1 233 aa13.12□□□□□ -0.31
NUP98-212ENST00000488828 TNS4Q8IZW8 715 aa13.12□□□□□ -0.31
NUP98-212ENST00000488828 ZNF296Q8WUU4 475 aaPredicted RBP13.12□□□□□ -0.31
NUP98-212ENST00000488828 RUFY2Q8WXA3 655 aa13.12□□□□□ -0.31
NUP98-212ENST00000488828 LARP6Q9BRS8 491 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms