RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 FOXP1Q9H334 677 aaPredicted RBP14.51□□□□□ -0.09
CLIC4-202ENST00000488683 TBC1D9BQ66K14 1250 aa14.51□□□□□ -0.09
CLIC4-202ENST00000488683 RASGRP4Q8TDF6 673 aa14.51□□□□□ -0.09
CLIC4-202ENST00000488683 FAM84BQ96KN1 310 aaPredicted RBP14.51□□□□□ -0.09
CLIC4-202ENST00000488683 NRAPQ86VF7 1730 aa14.51□□□□□ -0.09
CLIC4-202ENST00000488683 VWA3AA6NCI4 1184 aa14.5□□□□□ -0.09
CLIC4-202ENST00000488683 KARSQ15046 597 aaKnown RBP14.5□□□□□ -0.09
CLIC4-202ENST00000488683 IFIT1BQ5T764 474 aaKnown RBP14.5□□□□□ -0.09
CLIC4-202ENST00000488683 EEF2KMTQ96G04 330 aa14.5□□□□□ -0.09
CLIC4-202ENST00000488683 MINPP1Q9UNW1 487 aa14.5□□□□□ -0.09
CLIC4-202ENST00000488683 DUOX1Q9NRD9 1551 aa14.5□□□□□ -0.09
CLIC4-202ENST00000488683 ANKRD18AQ8IVF6 992 aa14.5□□□□□ -0.09
CLIC4-202ENST00000488683 VSTM4Q8IW00 320 aa14.5□□□□□ -0.09
CLIC4-202ENST00000488683 SYMPKQ92797 1274 aaKnown RBP14.5□□□□□ -0.09
CLIC4-202ENST00000488683 ZSCAN10Q96SZ4 725 aaPredicted RBP14.5□□□□□ -0.09
CLIC4-202ENST00000488683 PLIN2Q99541 437 aa14.5□□□□□ -0.09
CLIC4-202ENST00000488683 CPVLQ9H3G5 476 aa14.5□□□□□ -0.09
CLIC4-202ENST00000488683 ACTN4O43707 911 aaKnown RBP14.5□□□□□ -0.09
CLIC4-202ENST00000488683 TFRCP02786 760 aaKnown RBP14.5□□□□□ -0.09
CLIC4-202ENST00000488683 RILPL1Q5EBL4 403 aa14.5□□□□□ -0.09
CLIC4-202ENST00000488683 CTR9Q6PD62 1173 aa14.5□□□□□ -0.09
CLIC4-202ENST00000488683 SMARCE1Q969G3 411 aa14.5□□□□□ -0.09
CLIC4-202ENST00000488683 RNF41Q9H4P4 317 aaPredicted RBP14.5□□□□□ -0.09
CLIC4-202ENST00000488683 SCN7AQ01118 1682 aa14.49□□□□□ -0.09
CLIC4-202ENST00000488683 DPYDQ12882 1025 aa14.49□□□□□ -0.09
CLIC4-202ENST00000488683 SYCP1Q15431 976 aa14.49□□□□□ -0.09
CLIC4-202ENST00000488683 FAM98CQ17RN3 349 aaKnown RBP14.49□□□□□ -0.09
CLIC4-202ENST00000488683 GPKOWQ92917 476 aaPredicted RBP eCLIP14.49□□□□□ -0.09
CLIC4-202ENST00000488683 COL5A3P25940 1745 aaPredicted RBP14.49□□□□□ -0.09
CLIC4-202ENST00000488683 URI1O94763 535 aaPredicted RBP14.49□□□□□ -0.09
CLIC4-202ENST00000488683 PIP4K2BP78356 416 aa14.49□□□□□ -0.09
CLIC4-202ENST00000488683 AKAP17AQ02040 695 aaKnown RBP14.49□□□□□ -0.09
CLIC4-202ENST00000488683 MECOMQ03112 1051 aa14.49□□□□□ -0.09
CLIC4-202ENST00000488683 FUT2Q10981 343 aa14.49□□□□□ -0.09
CLIC4-202ENST00000488683 SRBD1Q8N5C6 995 aaKnown RBP14.49□□□□□ -0.09
CLIC4-202ENST00000488683 ESR2Q92731 530 aa14.49□□□□□ -0.09
CLIC4-202ENST00000488683 DYNLL2Q96FJ2 89 aa14.49□□□□□ -0.09
CLIC4-202ENST00000488683 WDR24Q96S15 920 aa14.49□□□□□ -0.09
CLIC4-202ENST00000488683 CDC5LQ99459 802 aaKnown RBP14.49□□□□□ -0.09
CLIC4-202ENST00000488683 ZSWIM4Q9H7M6 989 aa14.49□□□□□ -0.09
CLIC4-202ENST00000488683 ZNF446Q9NWS9 450 aa14.49□□□□□ -0.09
CLIC4-202ENST00000488683 ANAPC4Q9UJX5 808 aa14.49□□□□□ -0.09
CLIC4-202ENST00000488683 SLU7O95391 586 aaKnown RBP14.48□□□□□ -0.09
CLIC4-202ENST00000488683 USP17L8P0C7I0 530 aa14.48□□□□□ -0.09
CLIC4-202ENST00000488683 PIK3AP1Q6ZUJ8 805 aa14.48□□□□□ -0.09
CLIC4-202ENST00000488683 TMEM139Q8IV31 216 aa14.48□□□□□ -0.09
CLIC4-202ENST00000488683 REXO1L1PQ8IX06 675 aa14.48□□□□□ -0.09
CLIC4-202ENST00000488683 TMTC2Q8N394 836 aa14.48□□□□□ -0.09
CLIC4-202ENST00000488683 CCDC196A0A1B0GTZ2 297 aa14.48□□□□□ -0.09
CLIC4-202ENST00000488683 MCM7P33993 719 aa14.48□□□□□ -0.09
CLIC4-202ENST00000488683 SARSP49591 514 aaKnown RBP14.48□□□□□ -0.09
CLIC4-202ENST00000488683 GRIK5Q16478 980 aa14.48□□□□□ -0.09
CLIC4-202ENST00000488683 TRIM65Q6PJ69 517 aa14.48□□□□□ -0.09
CLIC4-202ENST00000488683 SRPRBQ9Y5M8 271 aaKnown RBP14.48□□□□□ -0.09
CLIC4-202ENST00000488683 SOWAHDA6NJG2 315 aa14.47□□□□□ -0.09
CLIC4-202ENST00000488683 CCT6AP40227 531 aaKnown RBP14.47□□□□□ -0.09
CLIC4-202ENST00000488683 MTA3Q9BTC8 594 aa14.47□□□□□ -0.09
CLIC4-202ENST00000488683 RNF26Q9BY78 433 aaPredicted RBP14.47□□□□□ -0.09
CLIC4-202ENST00000488683 AHDC1Q5TGY3 1603 aaPredicted RBP14.47□□□□□ -0.09
CLIC4-202ENST00000488683 PSDA5PKW4 1024 aaPredicted RBP14.47□□□□□ -0.09
CLIC4-202ENST00000488683 ABL1P00519 1130 aa14.47□□□□□ -0.09
CLIC4-202ENST00000488683 NT5DC1Q5TFE4 455 aa14.47□□□□□ -0.09
CLIC4-202ENST00000488683 SMAP1Q8IYB5 467 aaPredicted RBP14.47□□□□□ -0.09
CLIC4-202ENST00000488683 PP2D1A8MPX8 630 aa14.46□□□□□ -0.09
CLIC4-202ENST00000488683 RCAN1P53805 252 aa14.46□□□□□ -0.09
CLIC4-202ENST00000488683 PTGDRQ13258 359 aa14.46□□□□□ -0.09
CLIC4-202ENST00000488683 MORC3Q14149 939 aa14.46□□□□□ -0.09
CLIC4-202ENST00000488683 NPY5RQ15761 445 aa14.46□□□□□ -0.09
CLIC4-202ENST00000488683 IL17AQ16552 155 aa14.46□□□□□ -0.09
CLIC4-202ENST00000488683 TC2NQ8N9U0 490 aa14.46□□□□□ -0.09
CLIC4-202ENST00000488683 SLC44A5Q8NCS7 719 aa14.46□□□□□ -0.09
CLIC4-202ENST00000488683 PHF20Q9BVI0 1012 aa14.46□□□□□ -0.09
CLIC4-202ENST00000488683 CDCA7Q9BWT1 371 aaPredicted RBP14.46□□□□□ -0.09
CLIC4-202ENST00000488683 CARD6Q9BX69 1037 aa14.46□□□□□ -0.09
CLIC4-202ENST00000488683 BSDC1Q9NW68 430 aaPredicted RBP14.46□□□□□ -0.09
CLIC4-202ENST00000488683 TRIM75PA6NK02 468 aa14.46□□□□□ -0.09
CLIC4-202ENST00000488683 SEC31AO94979 1220 aaKnown RBP14.46□□□□□ -0.09
CLIC4-202ENST00000488683 TROAPQ12815 778 aa14.46□□□□□ -0.09
CLIC4-202ENST00000488683 UBE4AQ14139 1066 aa14.46□□□□□ -0.09
CLIC4-202ENST00000488683 SF3B3Q15393 1217 aaKnown RBP14.46□□□□□ -0.09
CLIC4-202ENST00000488683 STAG2Q8N3U4 1231 aa14.46□□□□□ -0.09
CLIC4-202ENST00000488683 DLEC1Q9Y238 1755 aa14.46□□□□□ -0.1
CLIC4-202ENST00000488683 ZNF18P17022 549 aa14.45□□□□□ -0.1
CLIC4-202ENST00000488683 KRT2P35908 639 aa14.45□□□□□ -0.1
CLIC4-202ENST00000488683 KCNJ6P48051 423 aa14.45□□□□□ -0.1
CLIC4-202ENST00000488683 DIXDC1Q155Q3 683 aa14.45□□□□□ -0.1
CLIC4-202ENST00000488683 CAVIN4Q5BKX8 364 aa14.45□□□□□ -0.1
CLIC4-202ENST00000488683 CATIPQ7Z7H3 387 aa14.45□□□□□ -0.1
CLIC4-202ENST00000488683 ELOA2Q8IYF1 753 aaPredicted RBP14.45□□□□□ -0.1
CLIC4-202ENST00000488683 ZNF579Q8NAF0 562 aaKnown RBP14.45□□□□□ -0.1
CLIC4-202ENST00000488683 PAGE5Q96GU1 130 aa14.45□□□□□ -0.1
CLIC4-202ENST00000488683 LZTFL1Q9NQ48 299 aa14.45□□□□□ -0.1
CLIC4-202ENST00000488683 PPP2R2CQ9Y2T4 447 aa14.45□□□□□ -0.1
CLIC4-202ENST00000488683 CBFA2T2O43439 604 aa14.45□□□□□ -0.1
CLIC4-202ENST00000488683 ARHGAP29Q52LW3 1261 aa14.45□□□□□ -0.1
CLIC4-202ENST00000488683 GPIHBP1Q8IV16 184 aa14.45□□□□□ -0.1
CLIC4-202ENST00000488683 NSUN4Q96CB9 384 aaKnown RBP14.45□□□□□ -0.1
CLIC4-202ENST00000488683 BAG1Q99933 345 aaPredicted RBP14.45□□□□□ -0.1
CLIC4-202ENST00000488683 GNL3LQ9NVN8 582 aaKnown RBP14.45□□□□□ -0.1
CLIC4-202ENST00000488683 ZNF652Q9Y2D9 606 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms