RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 USP17L13C9JLJ4 530 aa27.8■■■□□ 2.04
CUL4A-209ENST00000488558 USP17L11C9JVI0 530 aa27.8■■■□□ 2.04
CUL4A-209ENST00000488558 USP17L18D6R9N7 530 aa27.8■■■□□ 2.04
CUL4A-209ENST00000488558 USP17L22D6RA61 530 aa27.8■■■□□ 2.04
CUL4A-209ENST00000488558 USP17L17D6RBQ6 530 aa27.8■■■□□ 2.04
CUL4A-209ENST00000488558 USP17L19D6RCP7 530 aa27.8■■■□□ 2.04
CUL4A-209ENST00000488558 USP17L20D6RJB6 530 aa27.8■■■□□ 2.04
CUL4A-209ENST00000488558 USP17L24Q0WX57 530 aa27.8■■■□□ 2.04
CUL4A-209ENST00000488558 GPRC5AQ8NFJ5 357 aa27.8■■■□□ 2.04
CUL4A-209ENST00000488558 ACER1Q8TDN7 264 aa27.8■■■□□ 2.04
CUL4A-209ENST00000488558 PUS7LQ9H0K6 701 aaKnown RBP27.8■■■□□ 2.04
CUL4A-209ENST00000488558 VCAM1P19320 739 aa27.79■■■□□ 2.04
CUL4A-209ENST00000488558 GJA8P48165 433 aa27.79■■■□□ 2.04
CUL4A-209ENST00000488558 SEPT2Q15019 361 aa27.79■■■□□ 2.04
CUL4A-209ENST00000488558 C12orf60Q5U649 245 aa27.79■■■□□ 2.04
CUL4A-209ENST00000488558 TMEM179Q6ZVK1 233 aa27.79■■■□□ 2.04
CUL4A-209ENST00000488558 SHISA4Q96DD7 197 aa27.79■■■□□ 2.04
CUL4A-209ENST00000488558 TXNRD2Q9NNW7 524 aa27.79■■■□□ 2.04
CUL4A-209ENST00000488558 RBPJLQ9UBG7 517 aa27.79■■■□□ 2.04
CUL4A-209ENST00000488558 SLC4A4Q9Y6R1 1079 aa27.79■■■□□ 2.04
CUL4A-209ENST00000488558 MKI67P46013 3256 aaKnown RBP27.79■■■□□ 2.04
CUL4A-209ENST00000488558 INHAP05111 366 aa27.78■■■□□ 2.04
CUL4A-209ENST00000488558 ZFYP08048 801 aaPredicted RBP27.78■■■□□ 2.04
CUL4A-209ENST00000488558 ELNP15502 786 aa27.78■■■□□ 2.04
CUL4A-209ENST00000488558 ZYXQ15942 572 aaKnown RBP27.78■■■□□ 2.04
CUL4A-209ENST00000488558 SLC44A5Q8NCS7 719 aa27.78■■■□□ 2.04
CUL4A-209ENST00000488558 RNF208Q9H0X6 261 aa27.78■■■□□ 2.04
CUL4A-209ENST00000488558 GJD2Q9UKL4 321 aa27.78■■■□□ 2.04
CUL4A-209ENST00000488558 MPHOSPH10O00566 681 aaKnown RBP27.77■■■□□ 2.04
CUL4A-209ENST00000488558 CAPN2P17655 700 aa27.77■■■□□ 2.04
CUL4A-209ENST00000488558 ERVK-9P63128 1117 aa27.77■■■□□ 2.04
CUL4A-209ENST00000488558 ERVK-24P63145 666 aa27.77■■■□□ 2.04
CUL4A-209ENST00000488558 LBX2Q6XYB7 198 aa27.77■■■□□ 2.04
CUL4A-209ENST00000488558 APPBP2Q92624 585 aa27.77■■■□□ 2.04
CUL4A-209ENST00000488558 CCDC17Q96LX7 622 aa27.77■■■□□ 2.04
CUL4A-209ENST00000488558 ARPP21Q9UBL0 812 aaPredicted RBP27.77■■■□□ 2.04
CUL4A-209ENST00000488558 USP17L12C9JPN9 530 aa27.76■■■□□ 2.03
CUL4A-209ENST00000488558 USP17L21D6R901 530 aa27.76■■■□□ 2.03
CUL4A-209ENST00000488558 ERC2O15083 957 aa27.76■■■□□ 2.03
CUL4A-209ENST00000488558 MAPK4P31152 587 aa27.76■■■□□ 2.03
CUL4A-209ENST00000488558 TSHZ3Q63HK5 1081 aa27.76■■■□□ 2.03
CUL4A-209ENST00000488558 CATSPERGQ6ZRH7 1159 aa27.76■■■□□ 2.03
CUL4A-209ENST00000488558 C16orf86Q6ZW13 317 aa27.76■■■□□ 2.03
CUL4A-209ENST00000488558 DYNLL2Q96FJ2 89 aa27.76■■■□□ 2.03
CUL4A-209ENST00000488558 STRBPQ96SI9 672 aaKnown RBP27.76■■■□□ 2.03
CUL4A-209ENST00000488558 CRBNQ96SW2 442 aa27.76■■■□□ 2.03
CUL4A-209ENST00000488558 RABGAP1Q9Y3P9 1069 aa27.76■■■□□ 2.03
CUL4A-209ENST00000488558 RNF113AO15541 343 aaKnown RBP27.75■■■□□ 2.03
CUL4A-209ENST00000488558 LRRFIP1Q32MZ4 808 aaKnown RBP27.75■■■□□ 2.03
CUL4A-209ENST00000488558 GIMAP6Q6P9H5 292 aa27.75■■■□□ 2.03
CUL4A-209ENST00000488558 SOCS4Q8WXH5 440 aa27.75■■■□□ 2.03
CUL4A-209ENST00000488558 UNC93B1Q9H1C4 597 aa27.75■■■□□ 2.03
CUL4A-209ENST00000488558 A0A0G2JMZ2 1700 aa27.75■■■□□ 2.03
CUL4A-209ENST00000488558 GLRX3O76003 335 aaKnown RBP27.74■■■□□ 2.03
CUL4A-209ENST00000488558 CTR9Q6PD62 1173 aa27.74■■■□□ 2.03
CUL4A-209ENST00000488558 POTEEQ6S8J3 1075 aa27.74■■■□□ 2.03
CUL4A-209ENST00000488558 PI4K2BQ8TCG2 481 aa27.74■■■□□ 2.03
CUL4A-209ENST00000488558 CYP2D7A0A087X1C5 515 aa27.73■■■□□ 2.03
CUL4A-209ENST00000488558 A0A1W2PRG0 241 aa27.73■■■□□ 2.03
CUL4A-209ENST00000488558 HMGCRP04035 888 aa27.73■■■□□ 2.03
CUL4A-209ENST00000488558 AKR1B1P15121 316 aa27.73■■■□□ 2.03
CUL4A-209ENST00000488558 CDK8P49336 464 aa27.73■■■□□ 2.03
CUL4A-209ENST00000488558 AAMPQ13685 434 aa27.73■■■□□ 2.03
CUL4A-209ENST00000488558 U2AF1L4Q8WU68 220 aaKnown RBP27.73■■■□□ 2.03
CUL4A-209ENST00000488558 PAGR1Q9BTK6 254 aa27.73■■■□□ 2.03
CUL4A-209ENST00000488558 RPAP3Q9H6T3 665 aaPredicted RBP27.73■■■□□ 2.03
CUL4A-209ENST00000488558 SH2D4AQ9H788 454 aa27.73■■■□□ 2.03
CUL4A-209ENST00000488558 PAK6Q9NQU5 681 aaPredicted RBP27.73■■■□□ 2.03
CUL4A-209ENST00000488558 GREB1LQ9C091 1923 aaPredicted RBP27.73■■■□□ 2.03
CUL4A-209ENST00000488558 Q3C1V9 767 aa27.72■■■□□ 2.03
CUL4A-209ENST00000488558 SBK1Q52WX2 424 aa27.72■■■□□ 2.03
CUL4A-209ENST00000488558 OSBP2Q969R2 916 aa27.72■■■□□ 2.03
CUL4A-209ENST00000488558 YTHDC1Q96MU7 727 aaKnown RBP27.72■■■□□ 2.03
CUL4A-209ENST00000488558 NUDT12Q9BQG2 462 aa27.72■■■□□ 2.03
CUL4A-209ENST00000488558 ARHGEF10LQ9HCE6 1279 aa27.72■■■□□ 2.03
CUL4A-209ENST00000488558 ROBO3Q96MS0 1386 aa27.72■■■□□ 2.03
CUL4A-209ENST00000488558 SALL3Q9BXA9 1300 aa27.71■■■□□ 2.03
CUL4A-209ENST00000488558 RLFQ13129 1914 aa27.71■■■□□ 2.03
CUL4A-209ENST00000488558 PEX10O60683 326 aa27.71■■■□□ 2.03
CUL4A-209ENST00000488558 SGPL1O95470 568 aa27.71■■■□□ 2.03
CUL4A-209ENST00000488558 XRCC5P13010 732 aaKnown RBP27.71■■■□□ 2.03
CUL4A-209ENST00000488558 GNAT2P19087 354 aa27.71■■■□□ 2.03
CUL4A-209ENST00000488558 MX1P20591 662 aa27.71■■■□□ 2.03
CUL4A-209ENST00000488558 CCNA1P78396 465 aa27.71■■■□□ 2.03
CUL4A-209ENST00000488558 ICA1Q05084 483 aa27.71■■■□□ 2.03
CUL4A-209ENST00000488558 HDAC1Q13547 482 aaPredicted RBP27.71■■■□□ 2.03
CUL4A-209ENST00000488558 UBE2Q1Q7Z7E8 422 aa27.71■■■□□ 2.03
CUL4A-209ENST00000488558 LPAR1Q92633 364 aa27.71■■■□□ 2.03
CUL4A-209ENST00000488558 PORCNQ9H237 461 aa27.71■■■□□ 2.03
CUL4A-209ENST00000488558 SPDYE16A6NNV3 312 aaPredicted RBP27.7■■■□□ 2.02
CUL4A-209ENST00000488558 GSG1L2A8MUP6 293 aa27.7■■■□□ 2.02
CUL4A-209ENST00000488558 CNMDO75829 334 aa27.7■■■□□ 2.02
CUL4A-209ENST00000488558 GPR142Q7Z601 462 aa27.7■■■□□ 2.02
CUL4A-209ENST00000488558 CCAR1Q8IX12 1150 aaKnown RBP27.7■■■□□ 2.02
CUL4A-209ENST00000488558 OTUD7AQ8TE49 926 aaPredicted RBP27.7■■■□□ 2.02
CUL4A-209ENST00000488558 GCC1Q96CN9 775 aa27.7■■■□□ 2.02
CUL4A-209ENST00000488558 TMX2Q9Y320 296 aa27.7■■■□□ 2.02
CUL4A-209ENST00000488558 SMIM22K7EJ46 135 aa27.69■■■□□ 2.02
CUL4A-209ENST00000488558 GPAA1O43292 621 aa27.69■■■□□ 2.02
CUL4A-209ENST00000488558 PLEKHH3Q7Z736 793 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms