RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 NEDD1Q8NHV4 660 aa7.78□□□□□ -1.16
RN7SL561P-201ENST00000488553 CTCFLQ8NI51 663 aaPredicted RBP7.78□□□□□ -1.16
RN7SL561P-201ENST00000488553 OXER1Q8TDS5 423 aa7.78□□□□□ -1.16
RN7SL561P-201ENST00000488553 MXD3Q9BW11 206 aa7.78□□□□□ -1.16
RN7SL561P-201ENST00000488553 KAT14Q9H8E8 782 aa7.78□□□□□ -1.16
RN7SL561P-201ENST00000488553 TTF2Q9UNY4 1162 aaKnown RBP7.78□□□□□ -1.16
RN7SL561P-201ENST00000488553 MORC2Q9Y6X9 1032 aaPredicted RBP7.78□□□□□ -1.16
RN7SL561P-201ENST00000488553 TCHHQ07283 1943 aa7.78□□□□□ -1.16
RN7SL561P-201ENST00000488553 A0A1B0GVL5 298 aa7.77□□□□□ -1.17
RN7SL561P-201ENST00000488553 hCG_1642624A0A1W2PR95 340 aa7.77□□□□□ -1.17
RN7SL561P-201ENST00000488553 PALM3A6NDB9 673 aaPredicted RBP7.77□□□□□ -1.17
RN7SL561P-201ENST00000488553 KINO60870 393 aaKnown RBP7.77□□□□□ -1.17
RN7SL561P-201ENST00000488553 CUTAO60888 179 aa7.77□□□□□ -1.17
RN7SL561P-201ENST00000488553 CAVIN2O95810 425 aa7.77□□□□□ -1.17
RN7SL561P-201ENST00000488553 TSPY3P0CV98 308 aa7.77□□□□□ -1.17
RN7SL561P-201ENST00000488553 TSPY8P0CW00 308 aa7.77□□□□□ -1.17
RN7SL561P-201ENST00000488553 CHRNA5P30532 468 aa7.77□□□□□ -1.17
RN7SL561P-201ENST00000488553 GNAQP50148 359 aa7.77□□□□□ -1.17
RN7SL561P-201ENST00000488553 HDLBPQ00341 1268 aaKnown RBP7.77□□□□□ -1.17
RN7SL561P-201ENST00000488553 GABPAQ06546 454 aa7.77□□□□□ -1.17
RN7SL561P-201ENST00000488553 GRM4Q14833 912 aa7.77□□□□□ -1.17
RN7SL561P-201ENST00000488553 APOBEC3HQ6NTF7 200 aaKnown RBP7.77□□□□□ -1.17
RN7SL561P-201ENST00000488553 CDC42EP5Q6NZY7 148 aa7.77□□□□□ -1.17
RN7SL561P-201ENST00000488553 PNMA1Q8ND90 353 aa7.77□□□□□ -1.17
RN7SL561P-201ENST00000488553 TNFRSF25Q93038 417 aa7.77□□□□□ -1.17
RN7SL561P-201ENST00000488553 TIGD1Q96MW7 591 aa7.77□□□□□ -1.17
RN7SL561P-201ENST00000488553 TMEM47Q9BQJ4 181 aa7.77□□□□□ -1.17
RN7SL561P-201ENST00000488553 LZTS2Q9BRK4 669 aa7.77□□□□□ -1.17
RN7SL561P-201ENST00000488553 KCNQ5Q9NR82 932 aa7.77□□□□□ -1.17
RN7SL561P-201ENST00000488553 USP40Q9NVE5 1235 aa7.77□□□□□ -1.17
RN7SL561P-201ENST00000488553 MAD2L2Q9UI95 211 aa7.77□□□□□ -1.17
RN7SL561P-201ENST00000488553 HPSEQ9Y251 543 aa7.77□□□□□ -1.17
RN7SL561P-201ENST00000488553 TNS1Q9HBL0 1735 aaKnown RBP7.77□□□□□ -1.17
RN7SL561P-201ENST00000488553 CNTNAP5Q8WYK1 1306 aa7.77□□□□□ -1.17
RN7SL561P-201ENST00000488553 RGPD3A6NKT7 1758 aaPredicted RBP7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 RGPD4Q7Z3J3 1758 aa7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 F8W031 263 aaPredicted RBP7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 ZNF202O95125 648 aa7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 TOP1P11387 765 aaKnown RBP7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 SCG2P13521 617 aa7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 VEGFAP15692 232 aaPredicted RBP7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 PFKFB1P16118 471 aa7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 PTPREP23469 700 aa7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 SMARCA1P28370 1054 aa7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 MARCKSP29966 332 aaPredicted RBP7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 KRT2P35908 639 aa7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 NR5A1Q13285 461 aa7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 NPY5RQ15761 445 aa7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 PFKFB3Q16875 520 aaPredicted RBP7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 ANO6Q4KMQ2 910 aa7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 GRIPAP1Q4V328 841 aa7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 DACT2Q5SW24 774 aa7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 RESP18Q5W5W9 173 aa7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 SHC4Q6S5L8 630 aa7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 STAG2Q8N3U4 1231 aa7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 ZNF579Q8NAF0 562 aaKnown RBP7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 FAM200AQ8TCP9 573 aa7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 FBXW7Q969H0 707 aa7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 TEKT1Q969V4 418 aa7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 TRIM44Q96DX7 344 aaPredicted RBP7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 ZDHHC15Q96MV8 337 aa7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 CBX8Q9HC52 389 aa7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 CABP5Q9NP86 173 aa7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 DDX4Q9NQI0 724 aaKnown RBP7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 SH3GLB2Q9NR46 395 aa7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 VPS54Q9P1Q0 977 aa7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 MYH13Q9UKX3 1938 aa7.76□□□□□ -1.17
RN7SL561P-201ENST00000488553 CCDC88AQ3V6T2 1871 aa7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 IGKV6D-41A0A0C4DH26 115 aa7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 ESPNB1AK53 854 aa7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 AP5Z1O43299 807 aa7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 ECE2O60344 883 aa7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 NPM3O75607 178 aaKnown RBP7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 ADCY5O95622 1261 aa7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 CRKP46108 304 aa7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 SCNN1DP51172 638 aa7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 KIAA2012Q0VF49 1180 aa7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 SLC35G1Q2M3R5 365 aa7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 EARS2Q5JPH6 523 aaKnown RBP7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 ELOA2Q8IYF1 753 aaPredicted RBP7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 FAM177A1Q8N128 213 aaPredicted RBP7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 KRI1Q8N9T8 703 aaKnown RBP7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 SUPT20HQ8NEM7 779 aa7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 SLC16A10Q8TF71 515 aa7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 CLIC6Q96NY7 704 aa7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 SDF4Q9BRK5 362 aa7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 PDGFDQ9GZP0 370 aaPredicted RBP7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 DBNDD1Q9H9R9 158 aa7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 RRAGDQ9NQL2 400 aaPredicted RBP7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 KIAA1468Q9P260 1216 aa7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 ZNF219Q9P2Y4 722 aaPredicted RBP7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 SWAP70Q9UH65 585 aa7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 FBXO2Q9UK22 296 aaPredicted RBP7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 TAOK2Q9UL54 1235 aa7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 PCDHB6Q9Y5E3 794 aa7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 SRPRBQ9Y5M8 271 aaKnown RBP7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 SNED1Q8TER0 1413 aa7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 MYO3BQ8WXR4 1341 aa7.75□□□□□ -1.17
RN7SL561P-201ENST00000488553 DLEC1Q9Y238 1755 aa7.74□□□□□ -1.17
RN7SL561P-201ENST00000488553 CHD4Q14839 1912 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms