RNA–Protein interactions for RNA: ENST00000488407.1

FGD3-206, Transcript of FYVE, RhoGEF and PH domain containing 3, humanhuman

TSL 5

Gene FGD3, Length 462 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD3-206ENST00000488407 PDE6AP16499 860 aa13.72□□□□□ -0.21
FGD3-206ENST00000488407 SHMT1P34896 483 aa13.72□□□□□ -0.21
FGD3-206ENST00000488407 USP17L24Q0WX57 530 aa13.72□□□□□ -0.21
FGD3-206ENST00000488407 ABCB5Q2M3G0 1257 aa13.72□□□□□ -0.21
FGD3-206ENST00000488407 SHROOM1Q2M3G4 852 aaPredicted RBP13.72□□□□□ -0.21
FGD3-206ENST00000488407 CERKLQ49MI3 558 aaPredicted RBP13.72□□□□□ -0.21
FGD3-206ENST00000488407 CHRDL2Q6WN34 429 aa13.72□□□□□ -0.21
FGD3-206ENST00000488407 NECAB2Q7Z6G3 386 aa13.72□□□□□ -0.21
FGD3-206ENST00000488407 TRIB2Q92519 343 aa13.72□□□□□ -0.21
FGD3-206ENST00000488407 CRNKL1Q9BZJ0 848 aaKnown RBP13.72□□□□□ -0.21
FGD3-206ENST00000488407 CABP5Q9NP86 173 aa13.72□□□□□ -0.21
FGD3-206ENST00000488407 OGDHLQ9ULD0 1010 aa13.72□□□□□ -0.21
FGD3-206ENST00000488407 NAV1Q8NEY1 1877 aa13.72□□□□□ -0.21
FGD3-206ENST00000488407 TCRBV5S4A2TA0A5A2 114 aa13.71□□□□□ -0.21
FGD3-206ENST00000488407 EVI5O60447 810 aa13.71□□□□□ -0.21
FGD3-206ENST00000488407 IFIT2P09913 472 aaKnown RBP13.71□□□□□ -0.21
FGD3-206ENST00000488407 RGS2P41220 211 aa13.71□□□□□ -0.21
FGD3-206ENST00000488407 CCNA1P78396 465 aa13.71□□□□□ -0.21
FGD3-206ENST00000488407 MORN1Q5T089 497 aa13.71□□□□□ -0.21
FGD3-206ENST00000488407 SLC9C2Q5TAH2 1124 aa13.71□□□□□ -0.21
FGD3-206ENST00000488407 POTEEQ6S8J3 1075 aa13.71□□□□□ -0.21
FGD3-206ENST00000488407 CATSPERGQ6ZRH7 1159 aa13.71□□□□□ -0.21
FGD3-206ENST00000488407 GPR142Q7Z601 462 aa13.71□□□□□ -0.21
FGD3-206ENST00000488407 FEZ1Q99689 392 aa13.71□□□□□ -0.21
FGD3-206ENST00000488407 APBA2Q99767 749 aa13.71□□□□□ -0.21
FGD3-206ENST00000488407 IL1RAPL2Q9NP60 686 aa13.71□□□□□ -0.21
FGD3-206ENST00000488407 NDUFB9Q9Y6M9 179 aa13.71□□□□□ -0.21
FGD3-206ENST00000488407 GLRX3O76003 335 aaKnown RBP13.7□□□□□ -0.22
FGD3-206ENST00000488407 VCAM1P19320 739 aa13.7□□□□□ -0.22
FGD3-206ENST00000488407 PLCD1P51178 756 aa13.7□□□□□ -0.22
FGD3-206ENST00000488407 Q3C1V9 767 aa13.7□□□□□ -0.22
FGD3-206ENST00000488407 PLEKHH3Q7Z736 793 aa13.7□□□□□ -0.22
FGD3-206ENST00000488407 SIRT2Q8IXJ6 389 aa13.7□□□□□ -0.22
FGD3-206ENST00000488407 PAWRQ96IZ0 340 aaKnown RBP13.7□□□□□ -0.22
FGD3-206ENST00000488407 CRBNQ96SW2 442 aa13.7□□□□□ -0.22
FGD3-206ENST00000488407 RBM27Q9P2N5 1060 aaKnown RBP13.7□□□□□ -0.22
FGD3-206ENST00000488407 SWAP70Q9UH65 585 aa13.7□□□□□ -0.22
FGD3-206ENST00000488407 ZNF532Q9HCE3 1301 aa13.69□□□□□ -0.22
FGD3-206ENST00000488407 POLR3DP05423 398 aaPredicted RBP13.69□□□□□ -0.22
FGD3-206ENST00000488407 PRKAR2AP13861 404 aaKnown RBP13.69□□□□□ -0.22
FGD3-206ENST00000488407 ZKSCAN1P17029 563 aaPredicted RBP13.69□□□□□ -0.22
FGD3-206ENST00000488407 ATP5JP18859 108 aa13.69□□□□□ -0.22
FGD3-206ENST00000488407 CYP2B6P20813 491 aa13.69□□□□□ -0.22
FGD3-206ENST00000488407 GUCY1A2P33402 732 aa13.69□□□□□ -0.22
FGD3-206ENST00000488407 MNX1P50219 401 aaPredicted RBP13.69□□□□□ -0.22
FGD3-206ENST00000488407 RAB3GAP1Q15042 981 aa13.69□□□□□ -0.22
FGD3-206ENST00000488407 CCAR1Q8IX12 1150 aaKnown RBP13.69□□□□□ -0.22
FGD3-206ENST00000488407 NBPF3Q9H094 633 aa13.69□□□□□ -0.22
FGD3-206ENST00000488407 PORCNQ9H237 461 aa13.69□□□□□ -0.22
FGD3-206ENST00000488407 DCP1AQ9NPI6 582 aaPredicted RBP13.69□□□□□ -0.22
FGD3-206ENST00000488407 TRIOBPQ9H2D6 2365 aa13.69□□□□□ -0.22
FGD3-206ENST00000488407 SLC15A5A6NIM6 579 aa13.68□□□□□ -0.22
FGD3-206ENST00000488407 GOLIM4O00461 696 aa13.68□□□□□ -0.22
FGD3-206ENST00000488407 CNMDO75829 334 aa13.68□□□□□ -0.22
FGD3-206ENST00000488407 HOXC6P09630 235 aa13.68□□□□□ -0.22
FGD3-206ENST00000488407 TRIM32Q13049 653 aa13.68□□□□□ -0.22
FGD3-206ENST00000488407 MAP2K5Q13163 448 aa13.68□□□□□ -0.22
FGD3-206ENST00000488407 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.68□□□□□ -0.22
FGD3-206ENST00000488407 ATP8A2Q9NTI2 1148 aa13.68□□□□□ -0.22
FGD3-206ENST00000488407 PAG1Q9NWQ8 432 aa13.68□□□□□ -0.22
FGD3-206ENST00000488407 MCM9Q9NXL9 1143 aa13.68□□□□□ -0.22
FGD3-206ENST00000488407 ZNF236Q9UL36 1845 aa13.68□□□□□ -0.22
FGD3-206ENST00000488407 ALPK3Q96L96 1907 aa13.68□□□□□ -0.22
FGD3-206ENST00000488407 SPDYE16A6NNV3 312 aaPredicted RBP13.67□□□□□ -0.22
FGD3-206ENST00000488407 BMP8BP34820 402 aa13.67□□□□□ -0.22
FGD3-206ENST00000488407 ADD2P35612 726 aa13.67□□□□□ -0.22
FGD3-206ENST00000488407 CACNB2Q08289 660 aaPredicted RBP13.67□□□□□ -0.22
FGD3-206ENST00000488407 AAMPQ13685 434 aa13.67□□□□□ -0.22
FGD3-206ENST00000488407 UBE3CQ15386 1083 aa13.67□□□□□ -0.22
FGD3-206ENST00000488407 TMEM179Q6ZVK1 233 aa13.67□□□□□ -0.22
FGD3-206ENST00000488407 LCORLQ8N3X6 602 aa13.67□□□□□ -0.22
FGD3-206ENST00000488407 ACER1Q8TDN7 264 aa13.67□□□□□ -0.22
FGD3-206ENST00000488407 DIS3LQ8TF46 1054 aaKnown RBP13.67□□□□□ -0.22
FGD3-206ENST00000488407 LPAR1Q92633 364 aa13.67□□□□□ -0.22
FGD3-206ENST00000488407 DNAJC2Q99543 621 aaKnown RBP13.67□□□□□ -0.22
FGD3-206ENST00000488407 HAUS7Q99871 368 aa13.67□□□□□ -0.22
FGD3-206ENST00000488407 PAGR1Q9BTK6 254 aa13.67□□□□□ -0.22
FGD3-206ENST00000488407 A0A0G2JMZ2 1700 aa13.67□□□□□ -0.22
FGD3-206ENST00000488407 IGHA2P01877 340 aa13.66□□□□□ -0.22
FGD3-206ENST00000488407 COL6A1P12109 1028 aa13.66□□□□□ -0.22
FGD3-206ENST00000488407 PTPREP23469 700 aa13.66□□□□□ -0.22
FGD3-206ENST00000488407 GRB14Q14449 540 aa13.66□□□□□ -0.22
FGD3-206ENST00000488407 SEPT2Q15019 361 aa13.66□□□□□ -0.22
FGD3-206ENST00000488407 MB21D1Q8N884 522 aa13.66□□□□□ -0.22
FGD3-206ENST00000488407 SHCBP1Q8NEM2 672 aa13.66□□□□□ -0.22
FGD3-206ENST00000488407 CCDC17Q96LX7 622 aa13.66□□□□□ -0.22
FGD3-206ENST00000488407 C11orf49Q9H6J7 331 aa13.66□□□□□ -0.22
FGD3-206ENST00000488407 RPAP3Q9H6T3 665 aaPredicted RBP13.66□□□□□ -0.22
FGD3-206ENST00000488407 HOXC10Q9NYD6 342 aa13.66□□□□□ -0.22
FGD3-206ENST00000488407 RANBP2P49792 3224 aaKnown RBP13.66□□□□□ -0.22
FGD3-206ENST00000488407 STRNO43815 780 aa13.65□□□□□ -0.22
FGD3-206ENST00000488407 MSCO60682 206 aa13.65□□□□□ -0.22
FGD3-206ENST00000488407 PEX10O60683 326 aa13.65□□□□□ -0.22
FGD3-206ENST00000488407 NEFLP07196 543 aa13.65□□□□□ -0.22
FGD3-206ENST00000488407 IRX6P78412 446 aaPredicted RBP13.65□□□□□ -0.22
FGD3-206ENST00000488407 COG2Q14746 738 aa13.65□□□□□ -0.22
FGD3-206ENST00000488407 ZYXQ15942 572 aaKnown RBP13.65□□□□□ -0.22
FGD3-206ENST00000488407 LHX8Q68G74 356 aa13.65□□□□□ -0.22
FGD3-206ENST00000488407 SDR42E1Q8WUS8 393 aa13.65□□□□□ -0.22
FGD3-206ENST00000488407 EDC3Q96F86 508 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms