RNA–Protein interactions for RNA: ENST00000488193.5

TFAP2A-215, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 1 (best)

Gene TFAP2A, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-215ENST00000488193 DDTLA6NHG4 134 aaPredicted RBP16.79■□□□□ 0.28
TFAP2A-215ENST00000488193 SHMT1P34896 483 aa16.79■□□□□ 0.28
TFAP2A-215ENST00000488193 CXCL9Q07325 125 aa16.79■□□□□ 0.28
TFAP2A-215ENST00000488193 CAVIN1Q6NZI2 390 aaKnown RBP16.79■□□□□ 0.28
TFAP2A-215ENST00000488193 SRBD1Q8N5C6 995 aaKnown RBP16.79■□□□□ 0.28
TFAP2A-215ENST00000488193 TMEM47Q9BQJ4 181 aa16.79■□□□□ 0.28
TFAP2A-215ENST00000488193 FTOQ9C0B1 505 aaKnown RBP eCLIP16.79■□□□□ 0.28
TFAP2A-215ENST00000488193 TAOK3Q9H2K8 898 aa16.79■□□□□ 0.28
TFAP2A-215ENST00000488193 DNAJC18Q9H819 358 aa16.79■□□□□ 0.28
TFAP2A-215ENST00000488193 PLIN4Q96Q06 1357 aa16.79■□□□□ 0.28
TFAP2A-215ENST00000488193 IGKV6D-41A0A0C4DH26 115 aa16.78■□□□□ 0.28
TFAP2A-215ENST00000488193 MBD3O95983 291 aa16.78■□□□□ 0.28
TFAP2A-215ENST00000488193 UBE2HP62256 183 aa16.78■□□□□ 0.28
TFAP2A-215ENST00000488193 SLC35G1Q2M3R5 365 aa16.78■□□□□ 0.28
TFAP2A-215ENST00000488193 NIM1KQ8IY84 436 aa16.78■□□□□ 0.28
TFAP2A-215ENST00000488193 KLHL34Q8N239 644 aa16.78■□□□□ 0.28
TFAP2A-215ENST00000488193 PNMA1Q8ND90 353 aa16.78■□□□□ 0.28
TFAP2A-215ENST00000488193 RNF26Q9BY78 433 aaPredicted RBP16.78■□□□□ 0.28
TFAP2A-215ENST00000488193 RBM28Q9NW13 759 aaKnown RBP16.78■□□□□ 0.28
TFAP2A-215ENST00000488193 SERPINB13Q9UIV8 391 aa16.78■□□□□ 0.28
TFAP2A-215ENST00000488193 AKR1B1P15121 316 aa16.78■□□□□ 0.28
TFAP2A-215ENST00000488193 TCP10Q12799 353 aa16.78■□□□□ 0.28
TFAP2A-215ENST00000488193 CCDC178Q5BJE1 867 aa16.78■□□□□ 0.28
TFAP2A-215ENST00000488193 CEP95Q96GE4 821 aa16.78■□□□□ 0.28
TFAP2A-215ENST00000488193 USP28Q96RU2 1077 aa16.78■□□□□ 0.28
TFAP2A-215ENST00000488193 EHD4Q9H223 541 aa16.78■□□□□ 0.28
TFAP2A-215ENST00000488193 KAT14Q9H8E8 782 aa16.78■□□□□ 0.28
TFAP2A-215ENST00000488193 BCS1LQ9Y276 419 aa16.78■□□□□ 0.28
TFAP2A-215ENST00000488193 ARFGEF1Q9Y6D6 1849 aa16.77■□□□□ 0.28
TFAP2A-215ENST00000488193 CNTNAP5Q8WYK1 1306 aa16.77■□□□□ 0.28
TFAP2A-215ENST00000488193 SPDYE2BA6NHP3 402 aa16.77■□□□□ 0.27
TFAP2A-215ENST00000488193 PRPF3O43395 683 aaKnown RBP16.77■□□□□ 0.27
TFAP2A-215ENST00000488193 DEXIO95424 95 aa16.77■□□□□ 0.27
TFAP2A-215ENST00000488193 SPDYE6P0CI01 402 aa16.77■□□□□ 0.27
TFAP2A-215ENST00000488193 PGBD1Q96JS3 809 aa16.77■□□□□ 0.27
TFAP2A-215ENST00000488193 MAP3K14Q99558 947 aa16.77■□□□□ 0.27
TFAP2A-215ENST00000488193 hCG_1642624A0A1W2PR95 340 aa16.76■□□□□ 0.27
TFAP2A-215ENST00000488193 FSD2A1L4K1 749 aa16.76■□□□□ 0.27
TFAP2A-215ENST00000488193 GRM4Q14833 912 aa16.76■□□□□ 0.27
TFAP2A-215ENST00000488193 GAS2L3Q86XJ1 694 aa16.76■□□□□ 0.27
TFAP2A-215ENST00000488193 TRIM22Q8IYM9 498 aa16.76■□□□□ 0.27
TFAP2A-215ENST00000488193 STAG2Q8N3U4 1231 aa16.76■□□□□ 0.27
TFAP2A-215ENST00000488193 SCAND2PQ9GZW5 306 aaPredicted RBP16.76■□□□□ 0.27
TFAP2A-215ENST00000488193 SWAP70Q9UH65 585 aa16.76■□□□□ 0.27
TFAP2A-215ENST00000488193 MAD2L2Q9UI95 211 aa16.76■□□□□ 0.27
TFAP2A-215ENST00000488193 RCOR1Q9UKL0 485 aa16.76■□□□□ 0.27
TFAP2A-215ENST00000488193 V9GY48 417 aaPredicted RBP16.76■□□□□ 0.27
TFAP2A-215ENST00000488193 UTRNP46939 3433 aa16.76■□□□□ 0.27
TFAP2A-215ENST00000488193 LTBP3Q9NS15 1303 aa16.76■□□□□ 0.27
TFAP2A-215ENST00000488193 U2AF2P26368 475 aaKnown RBP eCLIP16.76■□□□□ 0.27
TFAP2A-215ENST00000488193 RASGRP2Q7LDG7 609 aa16.76■□□□□ 0.27
TFAP2A-215ENST00000488193 METTL16Q86W50 562 aaKnown RBP16.76■□□□□ 0.27
TFAP2A-215ENST00000488193 CTCFLQ8NI51 663 aaPredicted RBP16.76■□□□□ 0.27
TFAP2A-215ENST00000488193 ZBED3Q96IU2 234 aaPredicted RBP16.76■□□□□ 0.27
TFAP2A-215ENST00000488193 SPATA32Q96LK8 384 aa16.76■□□□□ 0.27
TFAP2A-215ENST00000488193 STX8Q9UNK0 236 aa16.76■□□□□ 0.27
TFAP2A-215ENST00000488193 ATRNL1Q5VV63 1379 aa16.75■□□□□ 0.27
TFAP2A-215ENST00000488193 VEGFAP15692 232 aaPredicted RBP16.75■□□□□ 0.27
TFAP2A-215ENST00000488193 RASSF7Q02833 373 aa16.75■□□□□ 0.27
TFAP2A-215ENST00000488193 CSPP1Q1MSJ5 1256 aa16.75■□□□□ 0.27
TFAP2A-215ENST00000488193 ZSCAN23Q3MJ62 389 aa16.75■□□□□ 0.27
TFAP2A-215ENST00000488193 AGBL3Q8NEM8 1001 aa16.75■□□□□ 0.27
TFAP2A-215ENST00000488193 WASF1Q92558 559 aa16.75■□□□□ 0.27
TFAP2A-215ENST00000488193 DHX36Q9H2U1 1008 aaKnown RBP16.75■□□□□ 0.27
TFAP2A-215ENST00000488193 MTMR4Q9NYA4 1195 aa16.75■□□□□ 0.27
TFAP2A-215ENST00000488193 KCNJ14Q9UNX9 436 aa16.75■□□□□ 0.27
TFAP2A-215ENST00000488193 SHTN1A0MZ66 631 aa16.74■□□□□ 0.27
TFAP2A-215ENST00000488193 FAM196BA6NMK8 535 aa16.74■□□□□ 0.27
TFAP2A-215ENST00000488193 ENTPD3O75355 529 aa16.74■□□□□ 0.27
TFAP2A-215ENST00000488193 MMP1P03956 469 aa16.74■□□□□ 0.27
TFAP2A-215ENST00000488193 HLA-DOAP06340 250 aa16.74■□□□□ 0.27
TFAP2A-215ENST00000488193 SHROOM1Q2M3G4 852 aaPredicted RBP16.74■□□□□ 0.27
TFAP2A-215ENST00000488193 MYSM1Q5VVJ2 828 aa16.74■□□□□ 0.27
TFAP2A-215ENST00000488193 ATL3Q6DD88 541 aa16.74■□□□□ 0.27
TFAP2A-215ENST00000488193 BRAPQ7Z569 592 aa16.74■□□□□ 0.27
TFAP2A-215ENST00000488193 CLEC10AQ8IUN9 316 aa16.74■□□□□ 0.27
TFAP2A-215ENST00000488193 MTMR14Q8NCE2 650 aa16.74■□□□□ 0.27
TFAP2A-215ENST00000488193 CFAP45Q9UL16 551 aa16.74■□□□□ 0.27
TFAP2A-215ENST00000488193 COL2A1P02458 1487 aaPredicted RBP16.74■□□□□ 0.27
TFAP2A-215ENST00000488193 PALM3A6NDB9 673 aaPredicted RBP16.73■□□□□ 0.27
TFAP2A-215ENST00000488193 CEBPZQ03701 1054 aaKnown RBP16.73■□□□□ 0.27
TFAP2A-215ENST00000488193 PI4KBQ9UBF8 816 aa16.73■□□□□ 0.27
TFAP2A-215ENST00000488193 ZNF70Q9UC06 446 aaPredicted RBP16.73■□□□□ 0.27
TFAP2A-215ENST00000488193 TAOK2Q9UL54 1235 aa16.73■□□□□ 0.27
TFAP2A-215ENST00000488193 CNTNAP1P78357 1384 aa16.73■□□□□ 0.27
TFAP2A-215ENST00000488193 TOP1P11387 765 aaKnown RBP16.73■□□□□ 0.27
TFAP2A-215ENST00000488193 ZNF445P59923 1031 aa16.73■□□□□ 0.27
TFAP2A-215ENST00000488193 CIAPIN1Q6FI81 312 aa16.73■□□□□ 0.27
TFAP2A-215ENST00000488193 TATDN1Q6P1N9 297 aa16.73■□□□□ 0.27
TFAP2A-215ENST00000488193 ZNF396Q96N95 335 aaPredicted RBP16.73■□□□□ 0.27
TFAP2A-215ENST00000488193 RTEL1Q9NZ71 1219 aa16.73■□□□□ 0.27
TFAP2A-215ENST00000488193 BTBD18B2RXH4 712 aa16.72■□□□□ 0.27
TFAP2A-215ENST00000488193 CYTH3O43739 400 aa16.72■□□□□ 0.27
TFAP2A-215ENST00000488193 KIF5BP33176 963 aa16.72■□□□□ 0.27
TFAP2A-215ENST00000488193 DLGAP5Q15398 846 aa16.72■□□□□ 0.27
TFAP2A-215ENST00000488193 NPY5RQ15761 445 aa16.72■□□□□ 0.27
TFAP2A-215ENST00000488193 SPDYE2Q495Y8 402 aa16.72■□□□□ 0.27
TFAP2A-215ENST00000488193 TPRNQ4KMQ1 711 aa16.72■□□□□ 0.27
TFAP2A-215ENST00000488193 VPS54Q9P1Q0 977 aa16.72■□□□□ 0.27
TFAP2A-215ENST00000488193 CLIC4Q9Y696 253 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms