RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 ZKSCAN3Q9BRR0 538 aa15.82■□□□□ 0.12
COPS7B-221ENST00000488111 RNF41Q9H4P4 317 aaPredicted RBP15.82■□□□□ 0.12
COPS7B-221ENST00000488111 SPDYE2BA6NHP3 402 aa15.82■□□□□ 0.12
COPS7B-221ENST00000488111 SPDYE6P0CI01 402 aa15.82■□□□□ 0.12
COPS7B-221ENST00000488111 CDK11BP21127 795 aaKnown RBP15.82■□□□□ 0.12
COPS7B-221ENST00000488111 TPD52L1Q16890 204 aaPredicted RBP15.82■□□□□ 0.12
COPS7B-221ENST00000488111 CEP135Q66GS9 1140 aa15.82■□□□□ 0.12
COPS7B-221ENST00000488111 AMOTL1Q8IY63 956 aa15.82■□□□□ 0.12
COPS7B-221ENST00000488111 SLC44A5Q8NCS7 719 aa15.82■□□□□ 0.12
COPS7B-221ENST00000488111 KRT23Q9C075 422 aa15.82■□□□□ 0.12
COPS7B-221ENST00000488111 PSME4Q14997 1843 aa15.81■□□□□ 0.12
COPS7B-221ENST00000488111 RANBP6O60518 1105 aaKnown RBP15.81■□□□□ 0.12
COPS7B-221ENST00000488111 EGFRP00533 1210 aa15.81■□□□□ 0.12
COPS7B-221ENST00000488111 GJB2P29033 226 aa15.81■□□□□ 0.12
COPS7B-221ENST00000488111 APOBRQ0VD83 1088 aa15.81■□□□□ 0.12
COPS7B-221ENST00000488111 STK3Q13188 491 aa15.81■□□□□ 0.12
COPS7B-221ENST00000488111 ME3Q16798 604 aa15.81■□□□□ 0.12
COPS7B-221ENST00000488111 DRC7Q8IY82 874 aa15.81■□□□□ 0.12
COPS7B-221ENST00000488111 CNNM2Q9H8M5 875 aa15.81■□□□□ 0.12
COPS7B-221ENST00000488111 CALCOCO1Q9P1Z2 691 aa15.81■□□□□ 0.12
COPS7B-221ENST00000488111 ELP1O95163 1332 aa15.81■□□□□ 0.12
COPS7B-221ENST00000488111 TULP2O00295 520 aa15.8■□□□□ 0.12
COPS7B-221ENST00000488111 SLURP2P0DP57 97 aa15.8■□□□□ 0.12
COPS7B-221ENST00000488111 CDC25BP30305 580 aa15.8■□□□□ 0.12
COPS7B-221ENST00000488111 RBM43Q6ZSC3 357 aaKnown RBP15.8■□□□□ 0.12
COPS7B-221ENST00000488111 NECAB1Q8N987 351 aa15.8■□□□□ 0.12
COPS7B-221ENST00000488111 CACTINQ8WUQ7 758 aaKnown RBP15.8■□□□□ 0.12
COPS7B-221ENST00000488111 OSBPL5Q9H0X9 879 aaPredicted RBP15.8■□□□□ 0.12
COPS7B-221ENST00000488111 ALDH8A1Q9H2A2 487 aaPredicted RBP15.8■□□□□ 0.12
COPS7B-221ENST00000488111 MYOZ2Q9NPC6 264 aa15.8■□□□□ 0.12
COPS7B-221ENST00000488111 FAM198AQ9UFP1 575 aa15.8■□□□□ 0.12
COPS7B-221ENST00000488111 LAMA4Q16363 1823 aa15.8■□□□□ 0.12
COPS7B-221ENST00000488111 SLC3A2P08195 630 aaKnown RBP15.8■□□□□ 0.12
COPS7B-221ENST00000488111 ANKRD1Q15327 319 aa15.8■□□□□ 0.12
COPS7B-221ENST00000488111 NBPF9Q3BBW0 867 aa15.8■□□□□ 0.12
COPS7B-221ENST00000488111 ANO6Q4KMQ2 910 aa15.8■□□□□ 0.12
COPS7B-221ENST00000488111 FAM47AQ5JRC9 791 aa15.8■□□□□ 0.12
COPS7B-221ENST00000488111 C9orf131Q5VYM1 1079 aa15.8■□□□□ 0.12
COPS7B-221ENST00000488111 SAMD7Q7Z3H4 446 aa15.8■□□□□ 0.12
COPS7B-221ENST00000488111 MICALL2Q8IY33 904 aa15.8■□□□□ 0.12
COPS7B-221ENST00000488111 CNOT7Q9UIV1 285 aaKnown RBP15.8■□□□□ 0.12
COPS7B-221ENST00000488111 SCAF8Q9UPN6 1271 aaKnown RBP15.8■□□□□ 0.12
COPS7B-221ENST00000488111 TCP10L2B9ZVM9 353 aa15.79■□□□□ 0.12
COPS7B-221ENST00000488111 TTC6Q86TZ1 520 aa15.79■□□□□ 0.12
COPS7B-221ENST00000488111 TRIM5Q9C035 493 aa15.79■□□□□ 0.12
COPS7B-221ENST00000488111 SENP2Q9HC62 589 aa15.79■□□□□ 0.12
COPS7B-221ENST00000488111 VGLL3A8MV65 326 aa15.79■□□□□ 0.12
COPS7B-221ENST00000488111 LIG1P18858 919 aa15.79■□□□□ 0.12
COPS7B-221ENST00000488111 PDE4BQ07343 736 aa15.79■□□□□ 0.12
COPS7B-221ENST00000488111 ZSCAN29Q8IWY8 852 aaPredicted RBP15.79■□□□□ 0.12
COPS7B-221ENST00000488111 ESR2Q92731 530 aa15.79■□□□□ 0.12
COPS7B-221ENST00000488111 ERO1AQ96HE7 468 aa15.79■□□□□ 0.12
COPS7B-221ENST00000488111 IDI2Q9BXS1 227 aa15.79■□□□□ 0.12
COPS7B-221ENST00000488111 MKNK2Q9HBH9 465 aa15.79■□□□□ 0.12
COPS7B-221ENST00000488111 VEZTQ9HBM0 779 aa15.79■□□□□ 0.12
COPS7B-221ENST00000488111 ZNF215Q9UL58 517 aaPredicted RBP15.79■□□□□ 0.12
COPS7B-221ENST00000488111 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.79■□□□□ 0.12
COPS7B-221ENST00000488111 WNT10BO00744 389 aa15.78■□□□□ 0.12
COPS7B-221ENST00000488111 FGRP09769 529 aa15.78■□□□□ 0.12
COPS7B-221ENST00000488111 RPS12P25398 132 aaKnown RBP15.78■□□□□ 0.12
COPS7B-221ENST00000488111 TBC1D10BQ4KMP7 808 aaPredicted RBP15.78■□□□□ 0.12
COPS7B-221ENST00000488111 NYAP1Q6ZVC0 841 aa15.78■□□□□ 0.12
COPS7B-221ENST00000488111 RAB11FIP4Q86YS3 637 aa15.78■□□□□ 0.12
COPS7B-221ENST00000488111 CCDC83Q8IWF9 413 aa15.78■□□□□ 0.12
COPS7B-221ENST00000488111 ZNF70Q9UC06 446 aaPredicted RBP15.78■□□□□ 0.12
COPS7B-221ENST00000488111 DDTLA6NHG4 134 aaPredicted RBP15.78■□□□□ 0.12
COPS7B-221ENST00000488111 IFIT3O14879 490 aaKnown RBP15.78■□□□□ 0.12
COPS7B-221ENST00000488111 DDNO94850 711 aaPredicted RBP15.78■□□□□ 0.12
COPS7B-221ENST00000488111 FBXO38Q6PIJ6 1188 aa15.78■□□□□ 0.12
COPS7B-221ENST00000488111 ZSCAN31Q96LW9 406 aaPredicted RBP15.78■□□□□ 0.12
COPS7B-221ENST00000488111 AGXT2Q9BYV1 514 aa15.78■□□□□ 0.12
COPS7B-221ENST00000488111 CDK5RAP2Q96SN8 1893 aa15.78■□□□□ 0.12
COPS7B-221ENST00000488111 TIAM2Q8IVF5 1701 aa15.78■□□□□ 0.12
COPS7B-221ENST00000488111 KRT85P78386 507 aa15.77■□□□□ 0.12
COPS7B-221ENST00000488111 ST3GAL1Q11201 340 aa15.77■□□□□ 0.12
COPS7B-221ENST00000488111 CCDC144BQ3MJ40 725 aa15.77■□□□□ 0.12
COPS7B-221ENST00000488111 TMEM67Q5HYA8 995 aa15.77■□□□□ 0.12
COPS7B-221ENST00000488111 SH3BP5LQ7L8J4 393 aa15.77■□□□□ 0.12
COPS7B-221ENST00000488111 CCDC144CPQ8IYA2 1237 aa15.77■□□□□ 0.12
COPS7B-221ENST00000488111 IGDCC4Q8TDY8 1250 aa15.77■□□□□ 0.12
COPS7B-221ENST00000488111 DPF2Q92785 391 aa15.77■□□□□ 0.12
COPS7B-221ENST00000488111 TNMDQ9H2S6 317 aa15.77■□□□□ 0.12
COPS7B-221ENST00000488111 SH2B1Q9NRF2 756 aaPredicted RBP15.77■□□□□ 0.12
COPS7B-221ENST00000488111 CLIP2Q9UDT6 1046 aa15.77■□□□□ 0.12
COPS7B-221ENST00000488111 NAV1Q8NEY1 1877 aa15.77■□□□□ 0.12
COPS7B-221ENST00000488111 NEMFO60524 1076 aa15.77■□□□□ 0.11
COPS7B-221ENST00000488111 NMT2O60551 498 aa15.77■□□□□ 0.11
COPS7B-221ENST00000488111 CDK8P49336 464 aa15.77■□□□□ 0.11
COPS7B-221ENST00000488111 ZNF280AP59817 542 aaPredicted RBP15.77■□□□□ 0.11
COPS7B-221ENST00000488111 CAMK4Q16566 473 aa15.77■□□□□ 0.11
COPS7B-221ENST00000488111 DDX19AQ9NUU7 478 aaKnown RBP15.77■□□□□ 0.11
COPS7B-221ENST00000488111 TMOD2Q9NZR1 351 aa15.77■□□□□ 0.11
COPS7B-221ENST00000488111 TSPY2A6NKD2 308 aa15.76■□□□□ 0.11
COPS7B-221ENST00000488111 SH2B2O14492 632 aaPredicted RBP15.76■□□□□ 0.11
COPS7B-221ENST00000488111 ORC4O43929 436 aa15.76■□□□□ 0.11
COPS7B-221ENST00000488111 SPDYE2Q495Y8 402 aa15.76■□□□□ 0.11
COPS7B-221ENST00000488111 GPC2Q8N158 579 aa15.76■□□□□ 0.11
COPS7B-221ENST00000488111 MTMR14Q8NCE2 650 aa15.76■□□□□ 0.11
COPS7B-221ENST00000488111 ZBED3Q96IU2 234 aaPredicted RBP15.76■□□□□ 0.11
COPS7B-221ENST00000488111 ANGEL1Q9UNK9 670 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms