RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 DYNLL2Q96FJ2 89 aa11.14□□□□□ -0.63
LCN2-205ENST00000487719 SEC62Q99442 399 aaKnown RBP11.14□□□□□ -0.63
LCN2-205ENST00000487719 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.14□□□□□ -0.63
LCN2-205ENST00000487719 CYP2D7A0A087X1C5 515 aa11.13□□□□□ -0.63
LCN2-205ENST00000487719 ATP2B2Q01814 1243 aa11.13□□□□□ -0.63
LCN2-205ENST00000487719 PPARAQ07869 468 aa11.13□□□□□ -0.63
LCN2-205ENST00000487719 NMIQ13287 307 aaPredicted RBP11.13□□□□□ -0.63
LCN2-205ENST00000487719 RRP1BQ14684 758 aaKnown RBP11.13□□□□□ -0.63
LCN2-205ENST00000487719 SEPT2Q15019 361 aa11.13□□□□□ -0.63
LCN2-205ENST00000487719 SH3D19Q5HYK7 790 aa11.13□□□□□ -0.63
LCN2-205ENST00000487719 CWC27Q6UX04 472 aaKnown RBP11.13□□□□□ -0.63
LCN2-205ENST00000487719 CCAR1Q8IX12 1150 aaKnown RBP11.13□□□□□ -0.63
LCN2-205ENST00000487719 SLC44A5Q8NCS7 719 aa11.13□□□□□ -0.63
LCN2-205ENST00000487719 KANSL2Q9H9L4 492 aa11.13□□□□□ -0.63
LCN2-205ENST00000487719 EFCC1Q9HA90 598 aa11.13□□□□□ -0.63
LCN2-205ENST00000487719 GOPCQ9HD26 462 aa11.13□□□□□ -0.63
LCN2-205ENST00000487719 TRIM17Q9Y577 477 aa11.13□□□□□ -0.63
LCN2-205ENST00000487719 PARP14Q460N5 1801 aa11.13□□□□□ -0.63
LCN2-205ENST00000487719 RAD50Q92878 1312 aa11.12□□□□□ -0.63
LCN2-205ENST00000487719 COL11A1P12107 1806 aaPredicted RBP11.12□□□□□ -0.63
LCN2-205ENST00000487719 MYH6P13533 1939 aa11.12□□□□□ -0.63
LCN2-205ENST00000487719 A0A0D9SFI3 127 aa11.12□□□□□ -0.63
LCN2-205ENST00000487719 RAD21O60216 631 aa11.12□□□□□ -0.63
LCN2-205ENST00000487719 TSPY3P0CV98 308 aa11.12□□□□□ -0.63
LCN2-205ENST00000487719 TSPY8P0CW00 308 aa11.12□□□□□ -0.63
LCN2-205ENST00000487719 ZYXQ15942 572 aaKnown RBP11.12□□□□□ -0.63
LCN2-205ENST00000487719 GPAT2Q6NUI2 795 aa11.12□□□□□ -0.63
LCN2-205ENST00000487719 CCDC129Q6ZRS4 1044 aa11.12□□□□□ -0.63
LCN2-205ENST00000487719 STK11IPQ8N1F8 1099 aa11.12□□□□□ -0.63
LCN2-205ENST00000487719 CD99L2Q8TCZ2 262 aa11.12□□□□□ -0.63
LCN2-205ENST00000487719 LPAR1Q92633 364 aa11.12□□□□□ -0.63
LCN2-205ENST00000487719 FAM227BQ96M60 508 aa11.12□□□□□ -0.63
LCN2-205ENST00000487719 MCOLN1Q9GZU1 580 aa11.12□□□□□ -0.63
LCN2-205ENST00000487719 KIAA1683Q9H0B3 1180 aa11.12□□□□□ -0.63
LCN2-205ENST00000487719 EPB41L4AQ9HCS5 686 aaPredicted RBP11.12□□□□□ -0.63
LCN2-205ENST00000487719 TOMM22Q9NS69 142 aa11.12□□□□□ -0.63
LCN2-205ENST00000487719 CPA4Q9UI42 421 aa11.12□□□□□ -0.63
LCN2-205ENST00000487719 KIAA0100Q14667 2235 aaKnown RBP11.12□□□□□ -0.63
LCN2-205ENST00000487719 ZMYM6O95789 1325 aa11.11□□□□□ -0.63
LCN2-205ENST00000487719 ZNFX1Q9P2E3 1918 aaKnown RBP11.11□□□□□ -0.63
LCN2-205ENST00000487719 USP17L15C9J2P7 530 aa11.11□□□□□ -0.63
LCN2-205ENST00000487719 USP17L13C9JLJ4 530 aa11.11□□□□□ -0.63
LCN2-205ENST00000487719 USP17L11C9JVI0 530 aa11.11□□□□□ -0.63
LCN2-205ENST00000487719 USP17L18D6R9N7 530 aa11.11□□□□□ -0.63
LCN2-205ENST00000487719 USP17L22D6RA61 530 aa11.11□□□□□ -0.63
LCN2-205ENST00000487719 USP17L17D6RBQ6 530 aa11.11□□□□□ -0.63
LCN2-205ENST00000487719 USP17L19D6RCP7 530 aa11.11□□□□□ -0.63
LCN2-205ENST00000487719 USP17L20D6RJB6 530 aa11.11□□□□□ -0.63
LCN2-205ENST00000487719 CYP2C8P10632 490 aa11.11□□□□□ -0.63
LCN2-205ENST00000487719 PCP11498 1178 aaKnown RBP11.11□□□□□ -0.63
LCN2-205ENST00000487719 AKR1B1P15121 316 aa11.11□□□□□ -0.63
LCN2-205ENST00000487719 HOXA7P31268 230 aaPredicted RBP11.11□□□□□ -0.63
LCN2-205ENST00000487719 PRMT2P55345 433 aa11.11□□□□□ -0.63
LCN2-205ENST00000487719 FCGRTP55899 365 aa11.11□□□□□ -0.63
LCN2-205ENST00000487719 LACTBP83111 547 aaPredicted RBP11.11□□□□□ -0.63
LCN2-205ENST00000487719 USP17L24Q0WX57 530 aa11.11□□□□□ -0.63
LCN2-205ENST00000487719 MOGSQ13724 837 aa11.11□□□□□ -0.63
LCN2-205ENST00000487719 ALX1Q15699 326 aa11.11□□□□□ -0.63
LCN2-205ENST00000487719 TREML2Q5T2D2 321 aa11.11□□□□□ -0.63
LCN2-205ENST00000487719 ERICH6BQ5W0A0 696 aa11.11□□□□□ -0.63
LCN2-205ENST00000487719 FBXO46Q6PJ61 603 aaPredicted RBP11.11□□□□□ -0.63
LCN2-205ENST00000487719 CASC1Q6TDU7 716 aa11.11□□□□□ -0.63
LCN2-205ENST00000487719 R3HDMLQ9H3Y0 253 aa11.11□□□□□ -0.63
LCN2-205ENST00000487719 RNF41Q9H4P4 317 aaPredicted RBP11.11□□□□□ -0.63
LCN2-205ENST00000487719 CWC22Q9HCG8 908 aaKnown RBP11.11□□□□□ -0.63
LCN2-205ENST00000487719 CTNNA3Q9UI47 895 aa11.11□□□□□ -0.63
LCN2-205ENST00000487719 ZSWIM8A7E2V4 1837 aa11.11□□□□□ -0.63
LCN2-205ENST00000487719 TSPY2A6NKD2 308 aa11.1□□□□□ -0.63
LCN2-205ENST00000487719 FMNL1O95466 1100 aaPredicted RBP11.1□□□□□ -0.63
LCN2-205ENST00000487719 HSPD1P10809 573 aaKnown RBP11.1□□□□□ -0.63
LCN2-205ENST00000487719 PDE4AP27815 886 aa11.1□□□□□ -0.63
LCN2-205ENST00000487719 NT5C2P49902 561 aa11.1□□□□□ -0.63
LCN2-205ENST00000487719 CCNA1P78396 465 aa11.1□□□□□ -0.63
LCN2-205ENST00000487719 FAM110CQ1W6H9 321 aa11.1□□□□□ -0.63
LCN2-205ENST00000487719 C17orf99Q6UX52 265 aa11.1□□□□□ -0.63
LCN2-205ENST00000487719 ABHD8Q96I13 439 aa11.1□□□□□ -0.63
LCN2-205ENST00000487719 C12orf42Q96LP6 360 aa11.1□□□□□ -0.63
LCN2-205ENST00000487719 TANGO6Q9C0B7 1094 aa11.1□□□□□ -0.63
LCN2-205ENST00000487719 ASCC2Q9H1I8 757 aaPredicted RBP11.1□□□□□ -0.63
LCN2-205ENST00000487719 PLXNB2O15031 1838 aa11.09□□□□□ -0.63
LCN2-205ENST00000487719 RANBP6O60518 1105 aaKnown RBP11.09□□□□□ -0.63
LCN2-205ENST00000487719 PRDM1O75626 825 aa11.09□□□□□ -0.63
LCN2-205ENST00000487719 VCAM1P19320 739 aa11.09□□□□□ -0.63
LCN2-205ENST00000487719 RASA1P20936 1047 aa11.09□□□□□ -0.63
LCN2-205ENST00000487719 PSMC4P43686 418 aa11.09□□□□□ -0.63
LCN2-205ENST00000487719 JAG1P78504 1218 aa11.09□□□□□ -0.63
LCN2-205ENST00000487719 SHROOM1Q2M3G4 852 aaPredicted RBP11.09□□□□□ -0.63
LCN2-205ENST00000487719 MFSD6Q6ZSS7 791 aa11.09□□□□□ -0.63
LCN2-205ENST00000487719 OTOP1Q7RTM1 612 aa11.09□□□□□ -0.63
LCN2-205ENST00000487719 NBPF11Q86T75 865 aa11.09□□□□□ -0.63
LCN2-205ENST00000487719 ANKRD13CQ8N6S4 541 aa11.09□□□□□ -0.63
LCN2-205ENST00000487719 COA7Q96BR5 231 aa11.09□□□□□ -0.63
LCN2-205ENST00000487719 ADGRA2Q96PE1 1338 aa11.09□□□□□ -0.63
LCN2-205ENST00000487719 PLIN4Q96Q06 1357 aa11.08□□□□□ -0.64
LCN2-205ENST00000487719 CCDC85CA6NKD9 419 aa11.08□□□□□ -0.64
LCN2-205ENST00000487719 ZNF213O14771 459 aa11.08□□□□□ -0.64
LCN2-205ENST00000487719 TNPO2O14787 897 aaKnown RBP11.08□□□□□ -0.64
LCN2-205ENST00000487719 WDR46O15213 610 aaKnown RBP11.08□□□□□ -0.64
LCN2-205ENST00000487719 CAPN15O75808 1086 aa11.08□□□□□ -0.64
LCN2-205ENST00000487719 TTLL1O95922 423 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms