RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 XPCQ01831 940 aaPredicted RBP7.04□□□□□ -1.28
UBR3-211ENST00000487689 PSMD2Q13200 908 aa7.04□□□□□ -1.28
UBR3-211ENST00000487689 SLBPQ14493 270 aaKnown RBP eCLIP7.04□□□□□ -1.28
UBR3-211ENST00000487689 C22orf34Q6ZV56 151 aa7.04□□□□□ -1.28
UBR3-211ENST00000487689 XAGE3Q8WTP9 111 aa7.04□□□□□ -1.28
UBR3-211ENST00000487689 DUSP9Q99956 384 aaKnown RBP7.04□□□□□ -1.28
UBR3-211ENST00000487689 FBRSQ9HAH7 460 aa7.04□□□□□ -1.28
UBR3-211ENST00000487689 PARD6AQ9NPB6 346 aa7.04□□□□□ -1.28
UBR3-211ENST00000487689 SEMA3GQ9NS98 782 aa7.04□□□□□ -1.28
UBR3-211ENST00000487689 H3BS24 57 aa7.03□□□□□ -1.28
UBR3-211ENST00000487689 CST3P01034 146 aaPredicted RBP7.03□□□□□ -1.28
UBR3-211ENST00000487689 RAC2P15153 192 aa7.03□□□□□ -1.28
UBR3-211ENST00000487689 LIG3P49916 1009 aa7.03□□□□□ -1.28
UBR3-211ENST00000487689 PTPN11Q06124 597 aaPredicted RBP7.03□□□□□ -1.28
UBR3-211ENST00000487689 SEPT6Q14141 434 aa7.03□□□□□ -1.28
UBR3-211ENST00000487689 TSNAXIP1Q2TAA8 658 aa7.03□□□□□ -1.28
UBR3-211ENST00000487689 PRAMEF13Q5VWM6 474 aa7.03□□□□□ -1.28
UBR3-211ENST00000487689 THAP5Q7Z6K1 395 aa7.03□□□□□ -1.28
UBR3-211ENST00000487689 KCNN1Q92952 543 aa7.03□□□□□ -1.28
UBR3-211ENST00000487689 GAL3ST3Q96A11 431 aa7.03□□□□□ -1.28
UBR3-211ENST00000487689 IRF2BPLQ9H1B7 796 aa7.03□□□□□ -1.28
UBR3-211ENST00000487689 ABCC9O60706 1549 aa7.02□□□□□ -1.29
UBR3-211ENST00000487689 ANKRD33BA6NCL7 494 aa7.02□□□□□ -1.29
UBR3-211ENST00000487689 BPNT1O95861 308 aa7.02□□□□□ -1.29
UBR3-211ENST00000487689 CHMP4BP1P59074 171 aa7.02□□□□□ -1.29
UBR3-211ENST00000487689 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.02□□□□□ -1.29
UBR3-211ENST00000487689 AGMOQ6ZNB7 445 aa7.02□□□□□ -1.29
UBR3-211ENST00000487689 AEBP1Q8IUX7 1158 aa7.02□□□□□ -1.29
UBR3-211ENST00000487689 ABHD4Q8TB40 342 aa7.02□□□□□ -1.29
UBR3-211ENST00000487689 SYTL4Q96C24 671 aaPredicted RBP7.02□□□□□ -1.29
UBR3-211ENST00000487689 FOXD2O60548 495 aaPredicted RBP7.01□□□□□ -1.29
UBR3-211ENST00000487689 NKG7Q16617 165 aa7.01□□□□□ -1.29
UBR3-211ENST00000487689 SLC6A19Q695T7 634 aa7.01□□□□□ -1.29
UBR3-211ENST00000487689 SND1Q7KZF4 910 aaKnown RBP eCLIP7.01□□□□□ -1.29
UBR3-211ENST00000487689 JARID2Q92833 1246 aaPredicted RBP7.01□□□□□ -1.29
UBR3-211ENST00000487689 SLC26A8Q96RN1 970 aa7.01□□□□□ -1.29
UBR3-211ENST00000487689 ZCCHC4Q9H5U6 513 aa7.01□□□□□ -1.29
UBR3-211ENST00000487689 ZSWIM5Q9P217 1185 aa7.01□□□□□ -1.29
UBR3-211ENST00000487689 PDIA4P13667 645 aaKnown RBP7□□□□□ -1.29
UBR3-211ENST00000487689 BMP7P18075 431 aa7□□□□□ -1.29
UBR3-211ENST00000487689 DBX2Q6ZNG2 339 aa7□□□□□ -1.29
UBR3-211ENST00000487689 UBE2FQ969M7 185 aa7□□□□□ -1.29
UBR3-211ENST00000487689 BCL11AQ9H165 835 aa7□□□□□ -1.29
UBR3-211ENST00000487689 MRS2Q9HD23 443 aa7□□□□□ -1.29
UBR3-211ENST00000487689 PCDHB5Q9Y5E4 795 aa7□□□□□ -1.29
UBR3-211ENST00000487689 CAPN6Q9Y6Q1 641 aa7□□□□□ -1.29
UBR3-211ENST00000487689 A0A0G2JLL6 359 aaPredicted RBP6.99□□□□□ -1.29
UBR3-211ENST00000487689 PRR33A8MZF0 331 aa6.99□□□□□ -1.29
UBR3-211ENST00000487689 TAF1CQ15572 869 aaPredicted RBP6.99□□□□□ -1.29
UBR3-211ENST00000487689 TMPRSS7Q7RTY8 843 aa6.99□□□□□ -1.29
UBR3-211ENST00000487689 CDH24Q86UP0 819 aa6.99□□□□□ -1.29
UBR3-211ENST00000487689 MRPL41Q8IXM3 137 aaKnown RBP6.99□□□□□ -1.29
UBR3-211ENST00000487689 PIWIL2Q8TC59 973 aaKnown RBP6.99□□□□□ -1.29
UBR3-211ENST00000487689 TMEM87BQ96K49 555 aa6.99□□□□□ -1.29
UBR3-211ENST00000487689 ALPK1Q96QP1 1244 aa6.99□□□□□ -1.29
UBR3-211ENST00000487689 NOC4LQ9BVI4 516 aaKnown RBP6.99□□□□□ -1.29
UBR3-211ENST00000487689 TRIT1Q9H3H1 467 aaKnown RBP6.99□□□□□ -1.29
UBR3-211ENST00000487689 ADAM30Q9UKF2 790 aa6.99□□□□□ -1.29
UBR3-211ENST00000487689 ST13P50502 369 aaKnown RBP6.98□□□□□ -1.29
UBR3-211ENST00000487689 YARSP54577 528 aaKnown RBP6.98□□□□□ -1.29
UBR3-211ENST00000487689 RPL6Q02878 288 aaKnown RBP6.98□□□□□ -1.29
UBR3-211ENST00000487689 TTC6Q86TZ1 520 aa6.98□□□□□ -1.29
UBR3-211ENST00000487689 DPH2Q9BQC3 489 aaPredicted RBP6.98□□□□□ -1.29
UBR3-211ENST00000487689 SLAMF8Q9P0V8 285 aa6.98□□□□□ -1.29
UBR3-211ENST00000487689 PARP2Q9UGN5 583 aa6.98□□□□□ -1.29
UBR3-211ENST00000487689 KCNH3Q9ULD8 1083 aa6.98□□□□□ -1.29
UBR3-211ENST00000487689 GFRA2O00451 464 aa6.97□□□□□ -1.29
UBR3-211ENST00000487689 TNNI2P48788 182 aa6.97□□□□□ -1.29
UBR3-211ENST00000487689 CDK8P49336 464 aa6.97□□□□□ -1.29
UBR3-211ENST00000487689 RIN3Q8TB24 985 aa6.97□□□□□ -1.29
UBR3-211ENST00000487689 GPATCH2Q9NW75 528 aa6.97□□□□□ -1.29
UBR3-211ENST00000487689 TJP2Q9UDY2 1190 aa6.97□□□□□ -1.29
UBR3-211ENST00000487689 ST14Q9Y5Y6 855 aa6.97□□□□□ -1.29
UBR3-211ENST00000487689 PLCG1P19174 1290 aa6.96□□□□□ -1.3
UBR3-211ENST00000487689 PWP1Q13610 501 aa6.96□□□□□ -1.3
UBR3-211ENST00000487689 MEI1Q5TIA1 1274 aa6.96□□□□□ -1.3
UBR3-211ENST00000487689 CCDC84Q86UT8 332 aaPredicted RBP6.96□□□□□ -1.3
UBR3-211ENST00000487689 RELL1Q8IUW5 271 aa6.96□□□□□ -1.3
UBR3-211ENST00000487689 MCATQ8IVS2 390 aaKnown RBP6.96□□□□□ -1.3
UBR3-211ENST00000487689 SRFP11831 508 aa6.95□□□□□ -1.3
UBR3-211ENST00000487689 SYN1P17600 705 aa6.95□□□□□ -1.3
UBR3-211ENST00000487689 TFE3P19532 575 aaPredicted RBP6.95□□□□□ -1.3
UBR3-211ENST00000487689 ERVFC1P60507 584 aa6.95□□□□□ -1.3
UBR3-211ENST00000487689 DAB2P98082 770 aa6.95□□□□□ -1.3
UBR3-211ENST00000487689 TNK2Q07912 1038 aa6.95□□□□□ -1.3
UBR3-211ENST00000487689 MLECQ14165 292 aa6.95□□□□□ -1.3
UBR3-211ENST00000487689 CREG2Q8IUH2 290 aa6.95□□□□□ -1.3
UBR3-211ENST00000487689 FAM13CQ8NE31 585 aa6.95□□□□□ -1.3
UBR3-211ENST00000487689 CEP131Q9UPN4 1083 aa6.95□□□□□ -1.3
UBR3-211ENST00000487689 CNTNAP4Q9C0A0 1308 aa6.95□□□□□ -1.3
UBR3-211ENST00000487689 SORBS3O60504 671 aa6.94□□□□□ -1.3
UBR3-211ENST00000487689 NFIXQ14938 502 aa6.94□□□□□ -1.3
UBR3-211ENST00000487689 CYB5D2Q8WUJ1 264 aa6.94□□□□□ -1.3
UBR3-211ENST00000487689 MYLIPQ8WY64 445 aa6.94□□□□□ -1.3
UBR3-211ENST00000487689 VTI1BQ9UEU0 232 aa6.94□□□□□ -1.3
UBR3-211ENST00000487689 TLR6Q9Y2C9 796 aa6.94□□□□□ -1.3
UBR3-211ENST00000487689 DNAJC25-GNG10A0A024R161 153 aa6.93□□□□□ -1.3
UBR3-211ENST00000487689 TPP2P29144 1249 aaPredicted RBP6.93□□□□□ -1.3
UBR3-211ENST00000487689 LTKP29376 864 aa6.93□□□□□ -1.3
UBR3-211ENST00000487689 RALGPS1Q5JS13 557 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms