RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 PATL2C9JE40 543 aaKnown RBP12.29□□□□□ -0.44
RNF220-215ENST00000487332 CDK8P49336 464 aa12.29□□□□□ -0.44
RNF220-215ENST00000487332 EVX2Q03828 476 aa12.29□□□□□ -0.44
RNF220-215ENST00000487332 RAB3GAP1Q15042 981 aa12.29□□□□□ -0.44
RNF220-215ENST00000487332 LBX2Q6XYB7 198 aa12.29□□□□□ -0.44
RNF220-215ENST00000487332 SLC44A5Q8NCS7 719 aa12.29□□□□□ -0.44
RNF220-215ENST00000487332 LPAR1Q92633 364 aa12.29□□□□□ -0.44
RNF220-215ENST00000487332 TRIM47Q96LD4 638 aa12.29□□□□□ -0.44
RNF220-215ENST00000487332 NACAP1Q9BZK3 213 aa12.29□□□□□ -0.44
RNF220-215ENST00000487332 ZNF287Q9HBT7 754 aa12.29□□□□□ -0.44
RNF220-215ENST00000487332 HELLSQ9NRZ9 838 aa12.29□□□□□ -0.44
RNF220-215ENST00000487332 EMILIN3Q9NT22 766 aa12.29□□□□□ -0.44
RNF220-215ENST00000487332 SRRDQ9UH36 339 aa12.29□□□□□ -0.44
RNF220-215ENST00000487332 ZSWIM8A7E2V4 1837 aa12.28□□□□□ -0.44
RNF220-215ENST00000487332 CTGFP29279 349 aa12.28□□□□□ -0.44
RNF220-215ENST00000487332 PSMC4P43686 418 aa12.28□□□□□ -0.44
RNF220-215ENST00000487332 IRX3P78415 501 aaPredicted RBP12.28□□□□□ -0.44
RNF220-215ENST00000487332 ICA1Q05084 483 aa12.28□□□□□ -0.44
RNF220-215ENST00000487332 PLEKHM2Q8IWE5 1019 aa12.28□□□□□ -0.44
RNF220-215ENST00000487332 DYNLL2Q96FJ2 89 aa12.28□□□□□ -0.44
RNF220-215ENST00000487332 FEZ1Q99689 392 aa12.28□□□□□ -0.44
RNF220-215ENST00000487332 ARHGAP39Q9C0H5 1083 aa12.28□□□□□ -0.44
RNF220-215ENST00000487332 PTCH2Q9Y6C5 1203 aa12.28□□□□□ -0.44
RNF220-215ENST00000487332 MYH8P13535 1937 aa12.27□□□□□ -0.44
RNF220-215ENST00000487332 BAZ2AQ9UIF9 1905 aaKnown RBP12.27□□□□□ -0.44
RNF220-215ENST00000487332 USP17L15C9J2P7 530 aa12.27□□□□□ -0.45
RNF220-215ENST00000487332 USP17L13C9JLJ4 530 aa12.27□□□□□ -0.45
RNF220-215ENST00000487332 USP17L11C9JVI0 530 aa12.27□□□□□ -0.45
RNF220-215ENST00000487332 USP17L18D6R9N7 530 aa12.27□□□□□ -0.45
RNF220-215ENST00000487332 USP17L22D6RA61 530 aa12.27□□□□□ -0.45
RNF220-215ENST00000487332 USP17L17D6RBQ6 530 aa12.27□□□□□ -0.45
RNF220-215ENST00000487332 USP17L19D6RCP7 530 aa12.27□□□□□ -0.45
RNF220-215ENST00000487332 USP17L20D6RJB6 530 aa12.27□□□□□ -0.45
RNF220-215ENST00000487332 AKR1B1P15121 316 aa12.27□□□□□ -0.45
RNF220-215ENST00000487332 VCAM1P19320 739 aa12.27□□□□□ -0.45
RNF220-215ENST00000487332 TDO2P48775 406 aa12.27□□□□□ -0.45
RNF220-215ENST00000487332 HERVK_113P62684 666 aa12.27□□□□□ -0.45
RNF220-215ENST00000487332 USP17L24Q0WX57 530 aa12.27□□□□□ -0.45
RNF220-215ENST00000487332 IRF5Q13568 498 aa12.27□□□□□ -0.45
RNF220-215ENST00000487332 SEPT2Q15019 361 aa12.27□□□□□ -0.45
RNF220-215ENST00000487332 IFNL3Q8IZI9 196 aa12.27□□□□□ -0.45
RNF220-215ENST00000487332 ZNF333Q96JL9 665 aa12.27□□□□□ -0.45
RNF220-215ENST00000487332 ARHGEF10LQ9HCE6 1279 aa12.27□□□□□ -0.45
RNF220-215ENST00000487332 SYNPO2Q9UMS6 1093 aa12.27□□□□□ -0.45
RNF220-215ENST00000487332 TMX2Q9Y320 296 aa12.27□□□□□ -0.45
RNF220-215ENST00000487332 MYPNQ86TC9 1320 aa12.27□□□□□ -0.45
RNF220-215ENST00000487332 HTTP42858 3142 aa12.26□□□□□ -0.45
RNF220-215ENST00000487332 MGAMO43451 1857 aa12.26□□□□□ -0.45
RNF220-215ENST00000487332 CYP2D7A0A087X1C5 515 aa12.26□□□□□ -0.45
RNF220-215ENST00000487332 MPHOSPH10O00566 681 aaKnown RBP12.26□□□□□ -0.45
RNF220-215ENST00000487332 FOXP2O15409 715 aa12.26□□□□□ -0.45
RNF220-215ENST00000487332 ALX1Q15699 326 aa12.26□□□□□ -0.45
RNF220-215ENST00000487332 CATSPERGQ6ZRH7 1159 aa12.26□□□□□ -0.45
RNF220-215ENST00000487332 NBPF11Q86T75 865 aa12.26□□□□□ -0.45
RNF220-215ENST00000487332 ANKRD13CQ8N6S4 541 aa12.26□□□□□ -0.45
RNF220-215ENST00000487332 ACER1Q8TDN7 264 aa12.26□□□□□ -0.45
RNF220-215ENST00000487332 SEC62Q99442 399 aaKnown RBP12.26□□□□□ -0.45
RNF220-215ENST00000487332 NAPBQ9H115 298 aa12.26□□□□□ -0.45
RNF220-215ENST00000487332 KANSL2Q9H9L4 492 aa12.26□□□□□ -0.45
RNF220-215ENST00000487332 ANAPC4Q9UJX5 808 aa12.26□□□□□ -0.45
RNF220-215ENST00000487332 IGKV6D-41A0A0C4DH26 115 aa12.25□□□□□ -0.45
RNF220-215ENST00000487332 A0A1W2PRG0 241 aa12.25□□□□□ -0.45
RNF220-215ENST00000487332 HIP1O00291 1037 aa12.25□□□□□ -0.45
RNF220-215ENST00000487332 WDR46O15213 610 aaKnown RBP12.25□□□□□ -0.45
RNF220-215ENST00000487332 FMNL1O95466 1100 aaPredicted RBP12.25□□□□□ -0.45
RNF220-215ENST00000487332 SLC3A2P08195 630 aaKnown RBP12.25□□□□□ -0.45
RNF220-215ENST00000487332 RASA1P20936 1047 aa12.25□□□□□ -0.45
RNF220-215ENST00000487332 NT5C2P49902 561 aa12.25□□□□□ -0.45
RNF220-215ENST00000487332 MFAP1P55081 439 aaKnown RBP12.25□□□□□ -0.45
RNF220-215ENST00000487332 SLC9C1Q4G0N8 1177 aa12.25□□□□□ -0.45
RNF220-215ENST00000487332 MCMDC2Q4G0Z9 681 aa12.25□□□□□ -0.45
RNF220-215ENST00000487332 B4GALNT3Q6L9W6 998 aa12.25□□□□□ -0.45
RNF220-215ENST00000487332 SLAIN1Q8ND83 568 aa12.25□□□□□ -0.45
RNF220-215ENST00000487332 PXYLP1Q8TE99 480 aa12.25□□□□□ -0.45
RNF220-215ENST00000487332 VCPKMTQ9H867 229 aa12.25□□□□□ -0.45
RNF220-215ENST00000487332 RABGAP1Q9Y3P9 1069 aa12.25□□□□□ -0.45
RNF220-215ENST00000487332 A0A0D9SFI3 127 aa12.24□□□□□ -0.45
RNF220-215ENST00000487332 SMIM22K7EJ46 135 aa12.24□□□□□ -0.45
RNF220-215ENST00000487332 TNPO2O14787 897 aaKnown RBP12.24□□□□□ -0.45
RNF220-215ENST00000487332 CAPN2P17655 700 aa12.24□□□□□ -0.45
RNF220-215ENST00000487332 ERVK-9P63128 1117 aa12.24□□□□□ -0.45
RNF220-215ENST00000487332 ERVK-24P63145 666 aa12.24□□□□□ -0.45
RNF220-215ENST00000487332 PRKCZQ05513 592 aa12.24□□□□□ -0.45
RNF220-215ENST00000487332 PDE4BQ07343 736 aa12.24□□□□□ -0.45
RNF220-215ENST00000487332 PPARAQ07869 468 aa12.24□□□□□ -0.45
RNF220-215ENST00000487332 PPP4R3BQ5MIZ7 849 aa12.24□□□□□ -0.45
RNF220-215ENST00000487332 CCDC171Q6TFL3 1326 aa12.24□□□□□ -0.45
RNF220-215ENST00000487332 SIAH1Q8IUQ4 282 aa12.24□□□□□ -0.45
RNF220-215ENST00000487332 GPRC5AQ8NFJ5 357 aa12.24□□□□□ -0.45
RNF220-215ENST00000487332 SOCS4Q8WXH5 440 aa12.24□□□□□ -0.45
RNF220-215ENST00000487332 COA7Q96BR5 231 aa12.24□□□□□ -0.45
RNF220-215ENST00000487332 P2RX7Q99572 595 aaKnown RBP12.24□□□□□ -0.45
RNF220-215ENST00000487332 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.24□□□□□ -0.45
RNF220-215ENST00000487332 RPAP3Q9H6T3 665 aaPredicted RBP12.24□□□□□ -0.45
RNF220-215ENST00000487332 NYAP2Q9P242 653 aa12.24□□□□□ -0.45
RNF220-215ENST00000487332 ZNF236Q9UL36 1845 aa12.24□□□□□ -0.45
RNF220-215ENST00000487332 SPDYE16A6NNV3 312 aaPredicted RBP12.23□□□□□ -0.45
RNF220-215ENST00000487332 MINDY4BA8MYZ0 360 aa12.23□□□□□ -0.45
RNF220-215ENST00000487332 TRIM6-TRIM34B2RNG4 842 aa12.23□□□□□ -0.45
RNF220-215ENST00000487332 APPP05067 770 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms