RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 SHROOM1Q2M3G4 852 aaPredicted RBP8.68□□□□□ -1.02
UBE4B-209ENST00000487244 NOL9Q5SY16 702 aaKnown RBP8.68□□□□□ -1.02
UBE4B-209ENST00000487244 LCORLQ8N3X6 602 aa8.68□□□□□ -1.02
UBE4B-209ENST00000487244 PI4K2BQ8TCG2 481 aa8.68□□□□□ -1.02
UBE4B-209ENST00000487244 BRI3BPQ8WY22 251 aa8.68□□□□□ -1.02
UBE4B-209ENST00000487244 WNT2BQ93097 391 aa8.68□□□□□ -1.02
UBE4B-209ENST00000487244 DNAJC18Q9H819 358 aa8.68□□□□□ -1.02
UBE4B-209ENST00000487244 PALD1Q9ULE6 856 aa8.68□□□□□ -1.02
UBE4B-209ENST00000487244 SALL3Q9BXA9 1300 aa8.68□□□□□ -1.02
UBE4B-209ENST00000487244 CCL15-CCL14A0A0B4J2E2 113 aa8.67□□□□□ -1.02
UBE4B-209ENST00000487244 MAGEB6P1A0A0J9YX57 407 aa8.67□□□□□ -1.02
UBE4B-209ENST00000487244 LOC285556D6RIA3 1793 aa8.67□□□□□ -1.02
UBE4B-209ENST00000487244 ADD2P35612 726 aa8.67□□□□□ -1.02
UBE4B-209ENST00000487244 JAG1P78504 1218 aa8.67□□□□□ -1.02
UBE4B-209ENST00000487244 PTGDRQ13258 359 aa8.67□□□□□ -1.02
UBE4B-209ENST00000487244 CCL15Q16663 113 aa8.67□□□□□ -1.02
UBE4B-209ENST00000487244 ANKRD45Q5TZF3 282 aa8.67□□□□□ -1.02
UBE4B-209ENST00000487244 ERO1BQ86YB8 467 aa8.67□□□□□ -1.02
UBE4B-209ENST00000487244 SCYL3Q8IZE3 742 aa8.67□□□□□ -1.02
UBE4B-209ENST00000487244 TNS4Q8IZW8 715 aa8.67□□□□□ -1.02
UBE4B-209ENST00000487244 FAM43AQ8N2R8 423 aa8.67□□□□□ -1.02
UBE4B-209ENST00000487244 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.67□□□□□ -1.02
UBE4B-209ENST00000487244 RBM27Q9P2N5 1060 aaKnown RBP8.67□□□□□ -1.02
UBE4B-209ENST00000487244 SEPT9Q9UHD8 586 aaPredicted RBP8.67□□□□□ -1.02
UBE4B-209ENST00000487244 PRKAB2O43741 272 aa8.66□□□□□ -1.02
UBE4B-209ENST00000487244 IGSF3O75054 1194 aa8.66□□□□□ -1.02
UBE4B-209ENST00000487244 MBD4O95243 580 aa8.66□□□□□ -1.02
UBE4B-209ENST00000487244 PTPRAP18433 802 aa8.66□□□□□ -1.02
UBE4B-209ENST00000487244 MX1P20591 662 aa8.66□□□□□ -1.02
UBE4B-209ENST00000487244 USP5P45974 858 aa8.66□□□□□ -1.02
UBE4B-209ENST00000487244 GTF2A2P52657 109 aa8.66□□□□□ -1.02
UBE4B-209ENST00000487244 CRHR2Q13324 411 aa8.66□□□□□ -1.02
UBE4B-209ENST00000487244 PPIL2Q13356 520 aa8.66□□□□□ -1.02
UBE4B-209ENST00000487244 MOGSQ13724 837 aa8.66□□□□□ -1.02
UBE4B-209ENST00000487244 SMC5Q8IY18 1101 aa8.66□□□□□ -1.02
UBE4B-209ENST00000487244 SDR42E1Q8WUS8 393 aa8.66□□□□□ -1.02
UBE4B-209ENST00000487244 GPATCH3Q96I76 525 aa8.66□□□□□ -1.02
UBE4B-209ENST00000487244 ARMT1Q9H993 441 aa8.66□□□□□ -1.02
UBE4B-209ENST00000487244 HCSTQ9UBK5 93 aa8.66□□□□□ -1.02
UBE4B-209ENST00000487244 TTC41PQ6P2S7 1318 aa8.65□□□□□ -1.02
UBE4B-209ENST00000487244 BTBD19C9JJ37 291 aa8.65□□□□□ -1.02
UBE4B-209ENST00000487244 SMIM22K7EJ46 135 aa8.65□□□□□ -1.02
UBE4B-209ENST00000487244 CTNND1O60716 968 aaKnown RBP8.65□□□□□ -1.02
UBE4B-209ENST00000487244 CYP2D6P10635 497 aa8.65□□□□□ -1.02
UBE4B-209ENST00000487244 CAP1Q01518 475 aa8.65□□□□□ -1.02
UBE4B-209ENST00000487244 PPATQ06203 517 aa8.65□□□□□ -1.02
UBE4B-209ENST00000487244 SNAPC2Q13487 334 aa8.65□□□□□ -1.02
UBE4B-209ENST00000487244 B4GALNT3Q6L9W6 998 aa8.65□□□□□ -1.02
UBE4B-209ENST00000487244 PADI6Q6TGC4 694 aa8.65□□□□□ -1.02
UBE4B-209ENST00000487244 KBTBD3Q8NAB2 608 aa8.65□□□□□ -1.02
UBE4B-209ENST00000487244 ANKK1Q8NFD2 765 aa8.65□□□□□ -1.02
UBE4B-209ENST00000487244 ZNF296Q8WUU4 475 aaPredicted RBP8.65□□□□□ -1.02
UBE4B-209ENST00000487244 GCC1Q96CN9 775 aa8.65□□□□□ -1.02
UBE4B-209ENST00000487244 LNPKQ9C0E8 428 aa8.65□□□□□ -1.02
UBE4B-209ENST00000487244 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.65□□□□□ -1.02
UBE4B-209ENST00000487244 PUS7LQ9H0K6 701 aaKnown RBP8.65□□□□□ -1.02
UBE4B-209ENST00000487244 DHX36Q9H2U1 1008 aaKnown RBP8.65□□□□□ -1.02
UBE4B-209ENST00000487244 PI4KBQ9UBF8 816 aa8.65□□□□□ -1.02
UBE4B-209ENST00000487244 KCNH4Q9UQ05 1017 aa8.65□□□□□ -1.02
UBE4B-209ENST00000487244 ZHX2Q9Y6X8 837 aa8.65□□□□□ -1.02
UBE4B-209ENST00000487244 CYP2D7A0A087X1C5 515 aa8.64□□□□□ -1.03
UBE4B-209ENST00000487244 TRIM75PA6NK02 468 aa8.64□□□□□ -1.03
UBE4B-209ENST00000487244 GPR25O00155 361 aa8.64□□□□□ -1.03
UBE4B-209ENST00000487244 GDF11O95390 407 aa8.64□□□□□ -1.03
UBE4B-209ENST00000487244 CETPP11597 493 aa8.64□□□□□ -1.03
UBE4B-209ENST00000487244 CAP2P40123 477 aa8.64□□□□□ -1.03
UBE4B-209ENST00000487244 PLCD1P51178 756 aa8.64□□□□□ -1.03
UBE4B-209ENST00000487244 INHBEP58166 350 aa8.64□□□□□ -1.03
UBE4B-209ENST00000487244 DGKZQ13574 1117 aa8.64□□□□□ -1.03
UBE4B-209ENST00000487244 AAMPQ13685 434 aa8.64□□□□□ -1.03
UBE4B-209ENST00000487244 UBE3CQ15386 1083 aa8.64□□□□□ -1.03
UBE4B-209ENST00000487244 TMED8Q6PL24 325 aaPredicted RBP8.64□□□□□ -1.03
UBE4B-209ENST00000487244 METTL16Q86W50 562 aaKnown RBP8.64□□□□□ -1.03
UBE4B-209ENST00000487244 CERS3Q8IU89 383 aa8.64□□□□□ -1.03
UBE4B-209ENST00000487244 CRACR2BQ8N4Y2 399 aaPredicted RBP8.64□□□□□ -1.03
UBE4B-209ENST00000487244 TATDN2Q93075 761 aa8.64□□□□□ -1.03
UBE4B-209ENST00000487244 OSBP2Q969R2 916 aa8.64□□□□□ -1.03
UBE4B-209ENST00000487244 ZFRQ96KR1 1074 aaKnown RBP8.64□□□□□ -1.03
UBE4B-209ENST00000487244 CFHR5Q9BXR6 569 aa8.64□□□□□ -1.03
UBE4B-209ENST00000487244 CRNKL1Q9BZJ0 848 aaKnown RBP8.64□□□□□ -1.03
UBE4B-209ENST00000487244 RWDD1Q9H446 243 aaPredicted RBP8.64□□□□□ -1.03
UBE4B-209ENST00000487244 DCP1AQ9NPI6 582 aaPredicted RBP8.64□□□□□ -1.03
UBE4B-209ENST00000487244 PICK1Q9NRD5 415 aa8.64□□□□□ -1.03
UBE4B-209ENST00000487244 HERC5Q9UII4 1024 aaKnown RBP8.64□□□□□ -1.03
UBE4B-209ENST00000487244 PNMA3Q9UL41 463 aa8.64□□□□□ -1.03
UBE4B-209ENST00000487244 AFG3L2Q9Y4W6 797 aa8.64□□□□□ -1.03
UBE4B-209ENST00000487244 CENPFP49454 3210 aa8.63□□□□□ -1.03
UBE4B-209ENST00000487244 M0R2C6 588 aa8.63□□□□□ -1.03
UBE4B-209ENST00000487244 SMAPO00193 183 aa8.63□□□□□ -1.03
UBE4B-209ENST00000487244 GLRX3O76003 335 aaKnown RBP8.63□□□□□ -1.03
UBE4B-209ENST00000487244 ALDH1A1P00352 501 aa8.63□□□□□ -1.03
UBE4B-209ENST00000487244 HLA-DOAP06340 250 aa8.63□□□□□ -1.03
UBE4B-209ENST00000487244 PDE1AP54750 535 aa8.63□□□□□ -1.03
UBE4B-209ENST00000487244 PTPN5P54829 565 aa8.63□□□□□ -1.03
UBE4B-209ENST00000487244 NUCB1Q02818 461 aa8.63□□□□□ -1.03
UBE4B-209ENST00000487244 TAF1CQ15572 869 aaPredicted RBP8.63□□□□□ -1.03
UBE4B-209ENST00000487244 GPAT2Q6NUI2 795 aa8.63□□□□□ -1.03
UBE4B-209ENST00000487244 NUDT18Q6ZVK8 323 aa8.63□□□□□ -1.03
UBE4B-209ENST00000487244 SLC44A5Q8NCS7 719 aa8.63□□□□□ -1.03
UBE4B-209ENST00000487244 MCOLN1Q9GZU1 580 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms