RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 USP17L20D6RJB6 530 aa22.98■■□□□ 1.27
CLIP2-206ENST00000487091 GJB1P08034 283 aa22.98■■□□□ 1.27
CLIP2-206ENST00000487091 CYP2D6P10635 497 aa22.98■■□□□ 1.27
CLIP2-206ENST00000487091 CCL5P13501 91 aa22.98■■□□□ 1.27
CLIP2-206ENST00000487091 USP17L24Q0WX57 530 aa22.98■■□□□ 1.27
CLIP2-206ENST00000487091 AMOTL1Q8IY63 956 aa22.98■■□□□ 1.27
CLIP2-206ENST00000487091 GPRC5AQ8NFJ5 357 aa22.98■■□□□ 1.27
CLIP2-206ENST00000487091 ACER1Q8TDN7 264 aa22.98■■□□□ 1.27
CLIP2-206ENST00000487091 PUS7LQ9H0K6 701 aaKnown RBP22.98■■□□□ 1.27
CLIP2-206ENST00000487091 SEPT2Q15019 361 aa22.97■■□□□ 1.27
CLIP2-206ENST00000487091 ZYXQ15942 572 aaKnown RBP22.97■■□□□ 1.27
CLIP2-206ENST00000487091 C12orf60Q5U649 245 aa22.97■■□□□ 1.27
CLIP2-206ENST00000487091 RNF208Q9H0X6 261 aa22.97■■□□□ 1.27
CLIP2-206ENST00000487091 TXNRD2Q9NNW7 524 aa22.97■■□□□ 1.27
CLIP2-206ENST00000487091 RBPJLQ9UBG7 517 aa22.97■■□□□ 1.27
CLIP2-206ENST00000487091 GJD2Q9UKL4 321 aa22.97■■□□□ 1.27
CLIP2-206ENST00000487091 SLC4A4Q9Y6R1 1079 aa22.97■■□□□ 1.27
CLIP2-206ENST00000487091 TTC41PQ6P2S7 1318 aa22.97■■□□□ 1.27
CLIP2-206ENST00000487091 USP17L12C9JPN9 530 aa22.96■■□□□ 1.27
CLIP2-206ENST00000487091 USP17L21D6R901 530 aa22.96■■□□□ 1.27
CLIP2-206ENST00000487091 ELNP15502 786 aa22.96■■□□□ 1.27
CLIP2-206ENST00000487091 GJA8P48165 433 aa22.96■■□□□ 1.27
CLIP2-206ENST00000487091 CATSPERGQ6ZRH7 1159 aa22.96■■□□□ 1.27
CLIP2-206ENST00000487091 TMEM179Q6ZVK1 233 aa22.96■■□□□ 1.27
CLIP2-206ENST00000487091 MPHOSPH10O00566 681 aaKnown RBP22.95■■□□□ 1.26
CLIP2-206ENST00000487091 INHAP05111 366 aa22.95■■□□□ 1.26
CLIP2-206ENST00000487091 ZFYP08048 801 aaPredicted RBP22.95■■□□□ 1.26
CLIP2-206ENST00000487091 TSHZ3Q63HK5 1081 aa22.95■■□□□ 1.26
CLIP2-206ENST00000487091 SLC44A5Q8NCS7 719 aa22.95■■□□□ 1.26
CLIP2-206ENST00000487091 DYNLL2Q96FJ2 89 aa22.95■■□□□ 1.26
CLIP2-206ENST00000487091 CCDC17Q96LX7 622 aa22.95■■□□□ 1.26
CLIP2-206ENST00000487091 STRBPQ96SI9 672 aaKnown RBP22.95■■□□□ 1.26
CLIP2-206ENST00000487091 CRBNQ96SW2 442 aa22.95■■□□□ 1.26
CLIP2-206ENST00000487091 MYH8P13535 1937 aa22.94■■□□□ 1.26
CLIP2-206ENST00000487091 ERC2O15083 957 aa22.94■■□□□ 1.26
CLIP2-206ENST00000487091 VCAM1P19320 739 aa22.94■■□□□ 1.26
CLIP2-206ENST00000487091 ERVK-9P63128 1117 aa22.94■■□□□ 1.26
CLIP2-206ENST00000487091 ERVK-24P63145 666 aa22.94■■□□□ 1.26
CLIP2-206ENST00000487091 APPBP2Q92624 585 aa22.94■■□□□ 1.26
CLIP2-206ENST00000487091 RABGAP1Q9Y3P9 1069 aa22.94■■□□□ 1.26
CLIP2-206ENST00000487091 A0A1W2PRG0 241 aa22.93■■□□□ 1.26
CLIP2-206ENST00000487091 RNF113AO15541 343 aaKnown RBP22.93■■□□□ 1.26
CLIP2-206ENST00000487091 CAPN2P17655 700 aa22.93■■□□□ 1.26
CLIP2-206ENST00000487091 MAPK4P31152 587 aa22.93■■□□□ 1.26
CLIP2-206ENST00000487091 CDK8P49336 464 aa22.93■■□□□ 1.26
CLIP2-206ENST00000487091 LRRFIP1Q32MZ4 808 aaKnown RBP22.93■■□□□ 1.26
CLIP2-206ENST00000487091 Q3C1V9 767 aa22.93■■□□□ 1.26
CLIP2-206ENST00000487091 GIMAP6Q6P9H5 292 aa22.93■■□□□ 1.26
CLIP2-206ENST00000487091 CTR9Q6PD62 1173 aa22.93■■□□□ 1.26
CLIP2-206ENST00000487091 POTEEQ6S8J3 1075 aa22.93■■□□□ 1.26
CLIP2-206ENST00000487091 C16orf86Q6ZW13 317 aa22.93■■□□□ 1.26
CLIP2-206ENST00000487091 SHISA4Q96DD7 197 aa22.93■■□□□ 1.26
CLIP2-206ENST00000487091 YTHDC1Q96MU7 727 aaKnown RBP22.93■■□□□ 1.26
CLIP2-206ENST00000487091 UNC93B1Q9H1C4 597 aa22.93■■□□□ 1.26
CLIP2-206ENST00000487091 CYP2D7A0A087X1C5 515 aa22.92■■□□□ 1.26
CLIP2-206ENST00000487091 PEX10O60683 326 aa22.92■■□□□ 1.26
CLIP2-206ENST00000487091 GLRX3O76003 335 aaKnown RBP22.92■■□□□ 1.26
CLIP2-206ENST00000487091 LBX2Q6XYB7 198 aa22.92■■□□□ 1.26
CLIP2-206ENST00000487091 PI4K2BQ8TCG2 481 aa22.92■■□□□ 1.26
CLIP2-206ENST00000487091 OSBP2Q969R2 916 aa22.92■■□□□ 1.26
CLIP2-206ENST00000487091 PAGR1Q9BTK6 254 aa22.92■■□□□ 1.26
CLIP2-206ENST00000487091 ARPP21Q9UBL0 812 aaPredicted RBP22.92■■□□□ 1.26
CLIP2-206ENST00000487091 AKR1B1P15121 316 aa22.91■■□□□ 1.26
CLIP2-206ENST00000487091 SBK1Q52WX2 424 aa22.91■■□□□ 1.26
CLIP2-206ENST00000487091 CCAR1Q8IX12 1150 aaKnown RBP22.91■■□□□ 1.26
CLIP2-206ENST00000487091 SOCS4Q8WXH5 440 aa22.91■■□□□ 1.26
CLIP2-206ENST00000487091 NUDT12Q9BQG2 462 aa22.91■■□□□ 1.26
CLIP2-206ENST00000487091 RPAP3Q9H6T3 665 aaPredicted RBP22.91■■□□□ 1.26
CLIP2-206ENST00000487091 PLXNB2O15031 1838 aa22.91■■□□□ 1.26
CLIP2-206ENST00000487091 GSG1L2A8MUP6 293 aa22.9■■□□□ 1.26
CLIP2-206ENST00000487091 SMIM22K7EJ46 135 aa22.9■■□□□ 1.26
CLIP2-206ENST00000487091 SGPL1O95470 568 aa22.9■■□□□ 1.26
CLIP2-206ENST00000487091 HMGCRP04035 888 aa22.9■■□□□ 1.26
CLIP2-206ENST00000487091 XRCC5P13010 732 aaKnown RBP22.9■■□□□ 1.26
CLIP2-206ENST00000487091 CCNA1P78396 465 aa22.9■■□□□ 1.26
CLIP2-206ENST00000487091 HDAC1Q13547 482 aaPredicted RBP22.9■■□□□ 1.26
CLIP2-206ENST00000487091 AAMPQ13685 434 aa22.9■■□□□ 1.26
CLIP2-206ENST00000487091 U2AF1L4Q8WU68 220 aaKnown RBP22.9■■□□□ 1.26
CLIP2-206ENST00000487091 GCC1Q96CN9 775 aa22.9■■□□□ 1.26
CLIP2-206ENST00000487091 PORCNQ9H237 461 aa22.9■■□□□ 1.26
CLIP2-206ENST00000487091 ARHGEF10LQ9HCE6 1279 aa22.9■■□□□ 1.26
CLIP2-206ENST00000487091 CNMDO75829 334 aa22.89■■□□□ 1.25
CLIP2-206ENST00000487091 GNAT2P19087 354 aa22.89■■□□□ 1.25
CLIP2-206ENST00000487091 MX1P20591 662 aa22.89■■□□□ 1.25
CLIP2-206ENST00000487091 SIAH1Q8IUQ4 282 aa22.89■■□□□ 1.25
CLIP2-206ENST00000487091 OTUD7AQ8TE49 926 aaPredicted RBP22.89■■□□□ 1.25
CLIP2-206ENST00000487091 LPAR1Q92633 364 aa22.89■■□□□ 1.25
CLIP2-206ENST00000487091 SH2D4AQ9H788 454 aa22.89■■□□□ 1.25
CLIP2-206ENST00000487091 PAK6Q9NQU5 681 aaPredicted RBP22.89■■□□□ 1.25
CLIP2-206ENST00000487091 ZBTB47Q9UFB7 747 aaPredicted RBP22.89■■□□□ 1.25
CLIP2-206ENST00000487091 TMX2Q9Y320 296 aa22.89■■□□□ 1.25
CLIP2-206ENST00000487091 ICA1Q05084 483 aa22.88■■□□□ 1.25
CLIP2-206ENST00000487091 COG2Q14746 738 aa22.88■■□□□ 1.25
CLIP2-206ENST00000487091 GPR142Q7Z601 462 aa22.88■■□□□ 1.25
CLIP2-206ENST00000487091 PLEKHH3Q7Z736 793 aa22.88■■□□□ 1.25
CLIP2-206ENST00000487091 UBE2Q1Q7Z7E8 422 aa22.88■■□□□ 1.25
CLIP2-206ENST00000487091 USP6NLQ92738 828 aa22.88■■□□□ 1.25
CLIP2-206ENST00000487091 HOXC10Q9NYD6 342 aa22.88■■□□□ 1.25
CLIP2-206ENST00000487091 SALL3Q9BXA9 1300 aa22.87■■□□□ 1.25
CLIP2-206ENST00000487091 SPDYE16A6NNV3 312 aaPredicted RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms