RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 TFRCP02786 760 aaKnown RBP29.67■■■□□ 2.34
LIME1-206ENST00000487026 TRIM32Q13049 653 aa29.67■■■□□ 2.34
LIME1-206ENST00000487026 SEPT2Q15019 361 aa29.67■■■□□ 2.34
LIME1-206ENST00000487026 HABP4Q5JVS0 413 aaKnown RBP29.67■■■□□ 2.34
LIME1-206ENST00000487026 C12orf42Q96LP6 360 aa29.67■■■□□ 2.34
LIME1-206ENST00000487026 DDX60LQ5H9U9 1706 aaKnown RBP29.67■■■□□ 2.34
LIME1-206ENST00000487026 NAV1Q8NEY1 1877 aa29.67■■■□□ 2.34
LIME1-206ENST00000487026 MPHOSPH10O00566 681 aaKnown RBP29.66■■■□□ 2.34
LIME1-206ENST00000487026 CYP2B6P20813 491 aa29.66■■■□□ 2.34
LIME1-206ENST00000487026 ERVK-9P63128 1117 aa29.66■■■□□ 2.34
LIME1-206ENST00000487026 ERVK-24P63145 666 aa29.66■■■□□ 2.34
LIME1-206ENST00000487026 KIAA1683Q9H0B3 1180 aa29.66■■■□□ 2.34
LIME1-206ENST00000487026 USP17L15C9J2P7 530 aa29.65■■■□□ 2.34
LIME1-206ENST00000487026 USP17L13C9JLJ4 530 aa29.65■■■□□ 2.34
LIME1-206ENST00000487026 USP17L11C9JVI0 530 aa29.65■■■□□ 2.34
LIME1-206ENST00000487026 USP17L18D6R9N7 530 aa29.65■■■□□ 2.34
LIME1-206ENST00000487026 USP17L22D6RA61 530 aa29.65■■■□□ 2.34
LIME1-206ENST00000487026 USP17L17D6RBQ6 530 aa29.65■■■□□ 2.34
LIME1-206ENST00000487026 USP17L19D6RCP7 530 aa29.65■■■□□ 2.34
LIME1-206ENST00000487026 USP17L20D6RJB6 530 aa29.65■■■□□ 2.34
LIME1-206ENST00000487026 USP14P54578 494 aa29.65■■■□□ 2.34
LIME1-206ENST00000487026 USP17L24Q0WX57 530 aa29.65■■■□□ 2.34
LIME1-206ENST00000487026 SLC44A5Q8NCS7 719 aa29.65■■■□□ 2.34
LIME1-206ENST00000487026 DYNLL2Q96FJ2 89 aa29.65■■■□□ 2.34
LIME1-206ENST00000487026 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.65■■■□□ 2.341e-9■■■■■ 29
LIME1-206ENST00000487026 PORCNQ9H237 461 aa29.65■■■□□ 2.34
LIME1-206ENST00000487026 PAK6Q9NQU5 681 aaPredicted RBP29.65■■■□□ 2.34
LIME1-206ENST00000487026 CEP290O15078 2479 aa29.65■■■□□ 2.34
LIME1-206ENST00000487026 FARP2O94887 1054 aaPredicted RBP29.64■■■□□ 2.34
LIME1-206ENST00000487026 HMGCRP04035 888 aa29.64■■■□□ 2.34
LIME1-206ENST00000487026 SMIM22K7EJ46 135 aa29.63■■■□□ 2.33
LIME1-206ENST00000487026 VCAM1P19320 739 aa29.63■■■□□ 2.33
LIME1-206ENST00000487026 CATSPERGQ6ZRH7 1159 aa29.63■■■□□ 2.33
LIME1-206ENST00000487026 CCAR1Q8IX12 1150 aaKnown RBP29.63■■■□□ 2.33
LIME1-206ENST00000487026 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.63■■■□□ 2.339e-9■■■■■ 70.5
LIME1-206ENST00000487026 PLXNB2O15031 1838 aa29.63■■■□□ 2.33
LIME1-206ENST00000487026 CYP2D7A0A087X1C5 515 aa29.62■■■□□ 2.33
LIME1-206ENST00000487026 CNMDO75829 334 aa29.62■■■□□ 2.33
LIME1-206ENST00000487026 MAPK4P31152 587 aa29.62■■■□□ 2.33
LIME1-206ENST00000487026 GTF3C2Q8WUA4 911 aaPredicted RBP29.62■■■□□ 2.33
LIME1-206ENST00000487026 TRIB2Q92519 343 aa29.62■■■□□ 2.33
LIME1-206ENST00000487026 NUDT12Q9BQG2 462 aa29.62■■■□□ 2.33
LIME1-206ENST00000487026 COLQQ9Y215 455 aaPredicted RBP29.62■■■□□ 2.33
LIME1-206ENST00000487026 A0A1W2PRG0 241 aa29.61■■■□□ 2.33
LIME1-206ENST00000487026 UBE3CQ15386 1083 aa29.61■■■□□ 2.33
LIME1-206ENST00000487026 HTATIP2Q9BUP3 242 aa29.61■■■□□ 2.33
LIME1-206ENST00000487026 RPAP3Q9H6T3 665 aaPredicted RBP29.61■■■□□ 2.33
LIME1-206ENST00000487026 DCTPP1Q9H773 170 aa29.61■■■□□ 2.33
LIME1-206ENST00000487026 ATP8A2Q9NTI2 1148 aa29.61■■■□□ 2.33
LIME1-206ENST00000487026 GPR142Q7Z601 462 aa29.6■■■□□ 2.33
LIME1-206ENST00000487026 ECHDC1Q9NTX5 307 aa29.6■■■□□ 2.33
LIME1-206ENST00000487026 RABGAP1Q9Y3P9 1069 aa29.6■■■□□ 2.33
LIME1-206ENST00000487026 PLEKHH3Q7Z736 793 aa29.59■■■□□ 2.33
LIME1-206ENST00000487026 CRISPLD2Q9H0B8 497 aa29.59■■■□□ 2.33
LIME1-206ENST00000487026 PUS7LQ9H0K6 701 aaKnown RBP29.59■■■□□ 2.33
LIME1-206ENST00000487026 TSHZ3Q63HK5 1081 aa29.58■■■□□ 2.33
LIME1-206ENST00000487026 RPTORQ8N122 1335 aa29.58■■■□□ 2.33
LIME1-206ENST00000487026 USP6NLQ92738 828 aa29.58■■■□□ 2.33
LIME1-206ENST00000487026 CWC22Q9HCG8 908 aaKnown RBP29.58■■■□□ 2.33
LIME1-206ENST00000487026 HMX1Q9NP08 348 aaPredicted RBP29.58■■■□□ 2.33
LIME1-206ENST00000487026 SWAP70Q9UH65 585 aa29.58■■■□□ 2.33
LIME1-206ENST00000487026 SLC4A4Q9Y6R1 1079 aa29.58■■■□□ 2.33
LIME1-206ENST00000487026 USP17L12C9JPN9 530 aa29.57■■■□□ 2.32
LIME1-206ENST00000487026 USP17L21D6R901 530 aa29.57■■■□□ 2.32
LIME1-206ENST00000487026 AKR1B1P15121 316 aa29.57■■■□□ 2.32
LIME1-206ENST00000487026 MORN1Q5T089 497 aa29.57■■■□□ 2.32
LIME1-206ENST00000487026 C12orf60Q5U649 245 aa29.57■■■□□ 2.32
LIME1-206ENST00000487026 ZSCAN25Q6NSZ9 544 aa29.57■■■□□ 2.32
LIME1-206ENST00000487026 CLEC10AQ8IUN9 316 aa29.57■■■□□ 2.32
LIME1-206ENST00000487026 SOCS4Q8WXH5 440 aa29.57■■■□□ 2.32
LIME1-206ENST00000487026 BTBD7Q9P203 1132 aa29.57■■■□□ 2.32
LIME1-206ENST00000487026 BAZ2AQ9UIF9 1905 aaKnown RBP29.56■■■□□ 2.32
LIME1-206ENST00000487026 XRCC5P13010 732 aaKnown RBP29.56■■■□□ 2.32
LIME1-206ENST00000487026 CCL14Q16627 93 aa29.56■■■□□ 2.32
LIME1-206ENST00000487026 WDR78Q5VTH9 848 aa29.56■■■□□ 2.32
LIME1-206ENST00000487026 TMEM179Q6ZVK1 233 aa29.56■■■□□ 2.32
LIME1-206ENST00000487026 PAWRQ96IZ0 340 aaKnown RBP29.56■■■□□ 2.32
LIME1-206ENST00000487026 SPDYE16A6NNV3 312 aaPredicted RBP29.55■■■□□ 2.32
LIME1-206ENST00000487026 CDK8P49336 464 aa29.55■■■□□ 2.32
LIME1-206ENST00000487026 KIAA1755Q5JYT7 1200 aa29.55■■■□□ 2.32
LIME1-206ENST00000487026 SIAH1Q8IUQ4 282 aa29.55■■■□□ 2.32
LIME1-206ENST00000487026 DIS3LQ8TF46 1054 aaKnown RBP29.55■■■□□ 2.32
LIME1-206ENST00000487026 PRKAR2AP13861 404 aaKnown RBP29.54■■■□□ 2.32
LIME1-206ENST00000487026 RGS2P41220 211 aa29.54■■■□□ 2.32
LIME1-206ENST00000487026 CCNA1P78396 465 aa29.54■■■□□ 2.32
LIME1-206ENST00000487026 PCDHB15Q9Y5E8 787 aa29.54■■■□□ 2.32
LIME1-206ENST00000487026 ZKSCAN1P17029 563 aaPredicted RBP29.53■■■□□ 2.32
LIME1-206ENST00000487026 CAPN2P17655 700 aa29.53■■■□□ 2.32
LIME1-206ENST00000487026 MAP3K21Q5TCX8 1036 aa29.53■■■□□ 2.32
LIME1-206ENST00000487026 CTR9Q6PD62 1173 aa29.53■■■□□ 2.32
LIME1-206ENST00000487026 CHRDL2Q6WN34 429 aa29.53■■■□□ 2.32
LIME1-206ENST00000487026 LBX2Q6XYB7 198 aa29.53■■■□□ 2.32
LIME1-206ENST00000487026 AMOTL1Q8IY63 956 aa29.53■■■□□ 2.32
LIME1-206ENST00000487026 DDRGK1Q96HY6 314 aa29.53■■■□□ 2.32
LIME1-206ENST00000487026 TANGO6Q9C0B7 1094 aa29.53■■■□□ 2.32
LIME1-206ENST00000487026 MYH7P12883 1935 aa29.53■■■□□ 2.32
LIME1-206ENST00000487026 CACNB2Q08289 660 aaPredicted RBP29.52■■■□□ 2.32
LIME1-206ENST00000487026 COG2Q14746 738 aa29.51■■■□□ 2.31
LIME1-206ENST00000487026 C16orf86Q6ZW13 317 aa29.51■■■□□ 2.31
LIME1-206ENST00000487026 TRMT44Q8IYL2 757 aaKnown RBP29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms