RNA–Protein interactions for RNA: ENST00000486851.5

ELL3-205, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 2

Gene ELL3, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-205ENST00000486851 USP38Q8NB14 1042 aa12.89□□□□□ -0.35
ELL3-205ENST00000486851 TGFBRAP1Q8WUH2 860 aa12.89□□□□□ -0.35
ELL3-205ENST00000486851 TRIM43Q96BQ3 446 aaPredicted RBP12.89□□□□□ -0.35
ELL3-205ENST00000486851 CDCA7LQ96GN5 454 aa12.89□□□□□ -0.35
ELL3-205ENST00000486851 PAGR1Q9BTK6 254 aa12.89□□□□□ -0.35
ELL3-205ENST00000486851 AATFQ9NY61 560 aaKnown RBP eCLIP12.89□□□□□ -0.35
ELL3-205ENST00000486851 NOB1Q9ULX3 412 aaKnown RBP12.89□□□□□ -0.35
ELL3-205ENST00000486851 SPDYE16A6NNV3 312 aaPredicted RBP12.88□□□□□ -0.35
ELL3-205ENST00000486851 SRGAP3O43295 1099 aa12.88□□□□□ -0.35
ELL3-205ENST00000486851 MSCO60682 206 aa12.88□□□□□ -0.35
ELL3-205ENST00000486851 CYP2E1P05181 493 aaPredicted RBP12.88□□□□□ -0.35
ELL3-205ENST00000486851 VCAM1P19320 739 aa12.88□□□□□ -0.35
ELL3-205ENST00000486851 GUCY1A2P33402 732 aa12.88□□□□□ -0.35
ELL3-205ENST00000486851 EPHB4P54760 987 aa12.88□□□□□ -0.35
ELL3-205ENST00000486851 USP17L2Q6R6M4 530 aa12.88□□□□□ -0.35
ELL3-205ENST00000486851 SLC39A5Q6ZMH5 540 aa12.88□□□□□ -0.35
ELL3-205ENST00000486851 SH3RF1Q7Z6J0 888 aa12.88□□□□□ -0.35
ELL3-205ENST00000486851 MYLIPQ8WY64 445 aa12.88□□□□□ -0.35
ELL3-205ENST00000486851 KIAA1683Q9H0B3 1180 aa12.88□□□□□ -0.35
ELL3-205ENST00000486851 SMC4Q9NTJ3 1288 aa12.88□□□□□ -0.35
ELL3-205ENST00000486851 RAI14Q9P0K7 980 aa12.88□□□□□ -0.35
ELL3-205ENST00000486851 NDUFB9Q9Y6M9 179 aa12.88□□□□□ -0.35
ELL3-205ENST00000486851 PNMA6EA0A0J9YXQ4 647 aa12.87□□□□□ -0.35
ELL3-205ENST00000486851 GH2P01242 217 aa12.87□□□□□ -0.35
ELL3-205ENST00000486851 MFSD14CQ5VZR4 134 aa12.87□□□□□ -0.35
ELL3-205ENST00000486851 OLFML2BQ68BL8 750 aa12.87□□□□□ -0.35
ELL3-205ENST00000486851 FAM9BQ8IZU0 186 aa12.87□□□□□ -0.35
ELL3-205ENST00000486851 ACER1Q8TDN7 264 aa12.87□□□□□ -0.35
ELL3-205ENST00000486851 LBHD1Q9BQE6 289 aaPredicted RBP12.87□□□□□ -0.35
ELL3-205ENST00000486851 TMEM265A0A087WTH1 108 aa12.86□□□□□ -0.35
ELL3-205ENST00000486851 USP17L15C9J2P7 530 aa12.86□□□□□ -0.35
ELL3-205ENST00000486851 USP17L13C9JLJ4 530 aa12.86□□□□□ -0.35
ELL3-205ENST00000486851 USP17L11C9JVI0 530 aa12.86□□□□□ -0.35
ELL3-205ENST00000486851 USP17L18D6R9N7 530 aa12.86□□□□□ -0.35
ELL3-205ENST00000486851 USP17L22D6RA61 530 aa12.86□□□□□ -0.35
ELL3-205ENST00000486851 USP17L17D6RBQ6 530 aa12.86□□□□□ -0.35
ELL3-205ENST00000486851 USP17L19D6RCP7 530 aa12.86□□□□□ -0.35
ELL3-205ENST00000486851 USP17L20D6RJB6 530 aa12.86□□□□□ -0.35
ELL3-205ENST00000486851 USP17L24Q0WX57 530 aa12.86□□□□□ -0.35
ELL3-205ENST00000486851 TRIM60Q495X7 471 aa12.86□□□□□ -0.35
ELL3-205ENST00000486851 GJC2Q5T442 439 aaPredicted RBP12.86□□□□□ -0.35
ELL3-205ENST00000486851 BADQ92934 168 aa12.86□□□□□ -0.35
ELL3-205ENST00000486851 ZNF512BQ96KM6 892 aaPredicted RBP12.86□□□□□ -0.35
ELL3-205ENST00000486851 EHD4Q9H223 541 aa12.86□□□□□ -0.35
ELL3-205ENST00000486851 ZNFX1Q9P2E3 1918 aaKnown RBP12.86□□□□□ -0.35
ELL3-205ENST00000486851 BDP1A6H8Y1 2624 aa12.85□□□□□ -0.35
ELL3-205ENST00000486851 ROBO3Q96MS0 1386 aa12.85□□□□□ -0.35
ELL3-205ENST00000486851 IGSF3O75054 1194 aa12.85□□□□□ -0.35
ELL3-205ENST00000486851 COBLO75128 1261 aa12.85□□□□□ -0.35
ELL3-205ENST00000486851 PLCG2P16885 1265 aa12.85□□□□□ -0.35
ELL3-205ENST00000486851 SHMT1P34896 483 aa12.85□□□□□ -0.35
ELL3-205ENST00000486851 DYNLL1P63167 89 aaKnown RBP12.85□□□□□ -0.35
ELL3-205ENST00000486851 GABPAQ06546 454 aa12.85□□□□□ -0.35
ELL3-205ENST00000486851 NAA16Q6N069 864 aaPredicted RBP12.85□□□□□ -0.35
ELL3-205ENST00000486851 NEUROD6Q96NK8 337 aa12.85□□□□□ -0.35
ELL3-205ENST00000486851 GPR108Q9NPR9 543 aa12.85□□□□□ -0.35
ELL3-205ENST00000486851 PIH1D3Q9NQM4 214 aaKnown RBP12.85□□□□□ -0.35
ELL3-205ENST00000486851 SNRKQ9NRH2 765 aa12.85□□□□□ -0.35
ELL3-205ENST00000486851 LRP2BPQ9P2M1 347 aa12.85□□□□□ -0.35
ELL3-205ENST00000486851 A0A1W2PRG0 241 aa12.84□□□□□ -0.35
ELL3-205ENST00000486851 SEPT4O43236 478 aa12.84□□□□□ -0.35
ELL3-205ENST00000486851 CT47B1P0C2W7 299 aaPredicted RBP12.84□□□□□ -0.35
ELL3-205ENST00000486851 UQCRFS1P1P0C7P4 283 aa12.84□□□□□ -0.35
ELL3-205ENST00000486851 CCNA1P78396 465 aa12.84□□□□□ -0.35
ELL3-205ENST00000486851 EVX2Q03828 476 aa12.84□□□□□ -0.35
ELL3-205ENST00000486851 POLA2Q14181 598 aa12.84□□□□□ -0.35
ELL3-205ENST00000486851 KIAA1755Q5JYT7 1200 aa12.84□□□□□ -0.35
ELL3-205ENST00000486851 DBNDD2Q9BQY9 259 aa12.84□□□□□ -0.35
ELL3-205ENST00000486851 MOV10L1Q9BXT6 1211 aaKnown RBP12.84□□□□□ -0.35
ELL3-205ENST00000486851 API5Q9BZZ5 524 aaKnown RBP12.84□□□□□ -0.35
ELL3-205ENST00000486851 SAP30BPQ9UHR5 308 aaKnown RBP12.84□□□□□ -0.35
ELL3-205ENST00000486851 ATP11BQ9Y2G3 1177 aa12.84□□□□□ -0.35
ELL3-205ENST00000486851 MYO9BQ13459 2157 aa12.83□□□□□ -0.36
ELL3-205ENST00000486851 ANP32CO43423 234 aa12.83□□□□□ -0.36
ELL3-205ENST00000486851 BAG3O95817 575 aa12.83□□□□□ -0.36
ELL3-205ENST00000486851 ADORA2AP29274 412 aa12.83□□□□□ -0.36
ELL3-205ENST00000486851 GRIN2CQ14957 1233 aa12.83□□□□□ -0.36
ELL3-205ENST00000486851 LRRC41Q15345 812 aa12.83□□□□□ -0.36
ELL3-205ENST00000486851 ZYXQ15942 572 aaKnown RBP12.83□□□□□ -0.36
ELL3-205ENST00000486851 TNNI3KQ59H18 835 aa12.83□□□□□ -0.36
ELL3-205ENST00000486851 FAM47AQ5JRC9 791 aa12.83□□□□□ -0.36
ELL3-205ENST00000486851 ARHGAP45Q92619 1136 aa12.83□□□□□ -0.36
ELL3-205ENST00000486851 PHF24Q9UPV7 400 aa12.83□□□□□ -0.36
ELL3-205ENST00000486851 HDAC5Q9UQL6 1122 aa12.83□□□□□ -0.36
ELL3-205ENST00000486851 TNNQ9UQP3 1299 aa12.83□□□□□ -0.36
ELL3-205ENST00000486851 FPGT-TNNI3KV9GXZ4 949 aa12.83□□□□□ -0.36
ELL3-205ENST00000486851 COL11A1P12107 1806 aaPredicted RBP12.83□□□□□ -0.36
ELL3-205ENST00000486851 NAV1Q8NEY1 1877 aa12.82□□□□□ -0.36
ELL3-205ENST00000486851 PLXNA1Q9UIW2 1896 aa12.82□□□□□ -0.36
ELL3-205ENST00000486851 KIAA0355O15063 1070 aa12.82□□□□□ -0.36
ELL3-205ENST00000486851 GLRX3O76003 335 aaKnown RBP12.82□□□□□ -0.36
ELL3-205ENST00000486851 GNAI3P08754 354 aa12.82□□□□□ -0.36
ELL3-205ENST00000486851 ZAP70P43403 619 aa12.82□□□□□ -0.36
ELL3-205ENST00000486851 RARSP54136 660 aaKnown RBP12.82□□□□□ -0.36
ELL3-205ENST00000486851 ATP2B2Q01814 1243 aa12.82□□□□□ -0.36
ELL3-205ENST00000486851 ANO1Q5XXA6 986 aa12.82□□□□□ -0.36
ELL3-205ENST00000486851 SIAH1Q8IUQ4 282 aa12.82□□□□□ -0.36
ELL3-205ENST00000486851 CRACR2BQ8N4Y2 399 aaPredicted RBP12.82□□□□□ -0.36
ELL3-205ENST00000486851 ARRDC4Q8NCT1 418 aa12.82□□□□□ -0.36
ELL3-205ENST00000486851 SHCBP1Q8NEM2 672 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms