RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 USP17L2Q6R6M4 530 aa19.12■□□□□ 0.65
HDAC8-218ENST00000486704 CCDC17Q96LX7 622 aa19.12■□□□□ 0.65
HDAC8-218ENST00000486704 FEZ1Q99689 392 aa19.12■□□□□ 0.65
HDAC8-218ENST00000486704 EPB41L4AQ9HCS5 686 aaPredicted RBP19.12■□□□□ 0.65
HDAC8-218ENST00000486704 EMILIN3Q9NT22 766 aa19.12■□□□□ 0.65
HDAC8-218ENST00000486704 DOCK3Q8IZD9 2030 aa19.12■□□□□ 0.65
HDAC8-218ENST00000486704 A0A0G2JMZ2 1700 aa19.11■□□□□ 0.65
HDAC8-218ENST00000486704 CTGFP29279 349 aa19.11■□□□□ 0.65
HDAC8-218ENST00000486704 PSMC4P43686 418 aa19.11■□□□□ 0.65
HDAC8-218ENST00000486704 CDK8P49336 464 aa19.11■□□□□ 0.65
HDAC8-218ENST00000486704 RGS19P49795 217 aa19.11■□□□□ 0.65
HDAC8-218ENST00000486704 SEPT2Q15019 361 aa19.11■□□□□ 0.65
HDAC8-218ENST00000486704 TRIM47Q96LD4 638 aa19.11■□□□□ 0.65
HDAC8-218ENST00000486704 SEC62Q99442 399 aaKnown RBP19.11■□□□□ 0.65
HDAC8-218ENST00000486704 RLFQ13129 1914 aa19.11■□□□□ 0.65
HDAC8-218ENST00000486704 MYH4Q9Y623 1939 aa19.11■□□□□ 0.65
HDAC8-218ENST00000486704 PATL2C9JE40 543 aaKnown RBP19.1■□□□□ 0.65
HDAC8-218ENST00000486704 SMIM22K7EJ46 135 aa19.1■□□□□ 0.65
HDAC8-218ENST00000486704 IRX3P78415 501 aaPredicted RBP19.1■□□□□ 0.65
HDAC8-218ENST00000486704 PLEKHM2Q8IWE5 1019 aa19.1■□□□□ 0.65
HDAC8-218ENST00000486704 ARMC5Q96C12 935 aa19.1■□□□□ 0.65
HDAC8-218ENST00000486704 CENPFP49454 3210 aa19.1■□□□□ 0.65
HDAC8-218ENST00000486704 MPHOSPH10O00566 681 aaKnown RBP19.09■□□□□ 0.65
HDAC8-218ENST00000486704 TDO2P48775 406 aa19.09■□□□□ 0.65
HDAC8-218ENST00000486704 FCGRTP55899 365 aa19.09■□□□□ 0.65
HDAC8-218ENST00000486704 IRX6P78412 446 aaPredicted RBP19.09■□□□□ 0.65
HDAC8-218ENST00000486704 ANKRD13CQ8N6S4 541 aa19.09■□□□□ 0.65
HDAC8-218ENST00000486704 ACER1Q8TDN7 264 aa19.09■□□□□ 0.65
HDAC8-218ENST00000486704 SRRDQ9UH36 339 aa19.09■□□□□ 0.65
HDAC8-218ENST00000486704 PTCH2Q9Y6C5 1203 aa19.09■□□□□ 0.65
HDAC8-218ENST00000486704 PLXNB2O15031 1838 aa19.09■□□□□ 0.65
HDAC8-218ENST00000486704 LAMA4Q16363 1823 aa19.09■□□□□ 0.65
HDAC8-218ENST00000486704 AKR1B1P15121 316 aa19.08■□□□□ 0.64
HDAC8-218ENST00000486704 HOXD10P28358 340 aa19.08■□□□□ 0.64
HDAC8-218ENST00000486704 IFNL3Q8IZI9 196 aa19.08■□□□□ 0.64
HDAC8-218ENST00000486704 GTF3C2Q8WUA4 911 aaPredicted RBP19.08■□□□□ 0.64
HDAC8-218ENST00000486704 NACAP1Q9BZK3 213 aa19.08■□□□□ 0.64
HDAC8-218ENST00000486704 MORF4L1Q9UBU8 362 aa19.08■□□□□ 0.64
HDAC8-218ENST00000486704 FMNL1O95466 1100 aaPredicted RBP19.07■□□□□ 0.64
HDAC8-218ENST00000486704 VCAM1P19320 739 aa19.07■□□□□ 0.64
HDAC8-218ENST00000486704 HERVK_113P62684 666 aa19.07■□□□□ 0.64
HDAC8-218ENST00000486704 ZYXQ15942 572 aaKnown RBP19.07■□□□□ 0.64
HDAC8-218ENST00000486704 HELLSQ9NRZ9 838 aa19.07■□□□□ 0.64
HDAC8-218ENST00000486704 MYPNQ86TC9 1320 aa19.06■□□□□ 0.64
HDAC8-218ENST00000486704 A0A1W2PRG0 241 aa19.06■□□□□ 0.64
HDAC8-218ENST00000486704 USP17L15C9J2P7 530 aa19.06■□□□□ 0.64
HDAC8-218ENST00000486704 USP17L13C9JLJ4 530 aa19.06■□□□□ 0.64
HDAC8-218ENST00000486704 USP17L11C9JVI0 530 aa19.06■□□□□ 0.64
HDAC8-218ENST00000486704 USP17L18D6R9N7 530 aa19.06■□□□□ 0.64
HDAC8-218ENST00000486704 USP17L22D6RA61 530 aa19.06■□□□□ 0.64
HDAC8-218ENST00000486704 USP17L17D6RBQ6 530 aa19.06■□□□□ 0.64
HDAC8-218ENST00000486704 USP17L19D6RCP7 530 aa19.06■□□□□ 0.64
HDAC8-218ENST00000486704 USP17L20D6RJB6 530 aa19.06■□□□□ 0.64
HDAC8-218ENST00000486704 FOXP2O15409 715 aa19.06■□□□□ 0.64
HDAC8-218ENST00000486704 APPP05067 770 aa19.06■□□□□ 0.64
HDAC8-218ENST00000486704 ICA1Q05084 483 aa19.06■□□□□ 0.64
HDAC8-218ENST00000486704 USP17L24Q0WX57 530 aa19.06■□□□□ 0.64
HDAC8-218ENST00000486704 SLC9C1Q4G0N8 1177 aa19.06■□□□□ 0.64
HDAC8-218ENST00000486704 SH2D4AQ9H788 454 aa19.06■□□□□ 0.64
HDAC8-218ENST00000486704 ARHGEF10LQ9HCE6 1279 aa19.06■□□□□ 0.64
HDAC8-218ENST00000486704 MINDY4BA8MYZ0 360 aa19.05■□□□□ 0.64
HDAC8-218ENST00000486704 RASA1P20936 1047 aa19.05■□□□□ 0.64
HDAC8-218ENST00000486704 SOX10P56693 466 aa19.05■□□□□ 0.64
HDAC8-218ENST00000486704 ZNF333Q96JL9 665 aa19.05■□□□□ 0.64
HDAC8-218ENST00000486704 P2RX7Q99572 595 aaKnown RBP19.05■□□□□ 0.64
HDAC8-218ENST00000486704 NAPBQ9H115 298 aa19.05■□□□□ 0.64
HDAC8-218ENST00000486704 ZNF287Q9HBT7 754 aa19.05■□□□□ 0.64
HDAC8-218ENST00000486704 TMX2Q9Y320 296 aa19.05■□□□□ 0.64
HDAC8-218ENST00000486704 PLIN4Q96Q06 1357 aa19.05■□□□□ 0.64
HDAC8-218ENST00000486704 A0A0D9SFI3 127 aa19.04■□□□□ 0.64
HDAC8-218ENST00000486704 TRIM6-TRIM34B2RNG4 842 aa19.04■□□□□ 0.64
HDAC8-218ENST00000486704 TNPO2O14787 897 aaKnown RBP19.04■□□□□ 0.64
HDAC8-218ENST00000486704 LBX2Q6XYB7 198 aa19.04■□□□□ 0.64
HDAC8-218ENST00000486704 CATSPERGQ6ZRH7 1159 aa19.04■□□□□ 0.64
HDAC8-218ENST00000486704 CCDC129Q6ZRS4 1044 aa19.04■□□□□ 0.64
HDAC8-218ENST00000486704 NBPF11Q86T75 865 aa19.04■□□□□ 0.64
HDAC8-218ENST00000486704 CLEC10AQ8IUN9 316 aa19.04■□□□□ 0.64
HDAC8-218ENST00000486704 SIAH1Q8IUQ4 282 aa19.04■□□□□ 0.64
HDAC8-218ENST00000486704 LPAR1Q92633 364 aa19.04■□□□□ 0.64
HDAC8-218ENST00000486704 KANSL2Q9H9L4 492 aa19.04■□□□□ 0.64
HDAC8-218ENST00000486704 COL11A1P12107 1806 aaPredicted RBP19.04■□□□□ 0.64
HDAC8-218ENST00000486704 PRKCZQ05513 592 aa19.03■□□□□ 0.64
HDAC8-218ENST00000486704 MCMDC2Q4G0Z9 681 aa19.03■□□□□ 0.64
HDAC8-218ENST00000486704 FAM227BQ96M60 508 aa19.03■□□□□ 0.64
HDAC8-218ENST00000486704 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.03■□□□□ 0.64
HDAC8-218ENST00000486704 RPAP3Q9H6T3 665 aaPredicted RBP19.03■□□□□ 0.64
HDAC8-218ENST00000486704 MKNK2Q9HBH9 465 aa19.03■□□□□ 0.64
HDAC8-218ENST00000486704 KIAA0100Q14667 2235 aaKnown RBP19.02■□□□□ 0.64
HDAC8-218ENST00000486704 ZMYM6O95789 1325 aa19.02■□□□□ 0.64
HDAC8-218ENST00000486704 ECM2O94769 699 aaPredicted RBP19.02■□□□□ 0.64
HDAC8-218ENST00000486704 PPARAQ07869 468 aa19.02■□□□□ 0.64
HDAC8-218ENST00000486704 IRF5Q13568 498 aa19.02■□□□□ 0.64
HDAC8-218ENST00000486704 ALX1Q15699 326 aa19.02■□□□□ 0.64
HDAC8-218ENST00000486704 GPRC5AQ8NFJ5 357 aa19.02■□□□□ 0.64
HDAC8-218ENST00000486704 RAET1EQ8TD07 263 aa19.02■□□□□ 0.64
HDAC8-218ENST00000486704 RILPL2Q969X0 211 aa19.02■□□□□ 0.64
HDAC8-218ENST00000486704 VCPKMTQ9H867 229 aa19.02■□□□□ 0.64
HDAC8-218ENST00000486704 TXNRD2Q9NNW7 524 aa19.02■□□□□ 0.64
HDAC8-218ENST00000486704 RBPJLQ9UBG7 517 aa19.02■□□□□ 0.64
HDAC8-218ENST00000486704 ZNF236Q9UL36 1845 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms