RNA–Protein interactions for RNA: ENST00000486695.1

KIFC1-213, Transcript of kinesin family member C1, human

TSL 3

Gene KIFC1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC1-213	ENST00000486695	PI4KB	Q9UBF8	816 aa		10.55	□□□□□ -0.72
KIFC1-213	ENST00000486695	MTMR6	Q9Y217	621 aa		10.55	□□□□□ -0.72
KIFC1-213	ENST00000486695	PCDHAC2	Q9Y5I4	1007 aa		10.55	□□□□□ -0.72
KIFC1-213	ENST00000486695	SBF1	O95248	1867 aa		10.55	□□□□□ -0.72
KIFC1-213	ENST00000486695	FZD9	O00144	591 aa		10.54	□□□□□ -0.72
KIFC1-213	ENST00000486695	DTNB	O60941	627 aa		10.54	□□□□□ -0.72
KIFC1-213	ENST00000486695	F13A1	P00488	732 aa		10.54	□□□□□ -0.72
KIFC1-213	ENST00000486695	RXRA	P19793	462 aa		10.54	□□□□□ -0.72
KIFC1-213	ENST00000486695	LMNB1	P20700	586 aa		10.54	□□□□□ -0.72
KIFC1-213	ENST00000486695	ADD1	P35611	737 aa	Known RBP	10.54	□□□□□ -0.72
KIFC1-213	ENST00000486695	SSRP1	Q08945	709 aa	Known RBP	10.54	□□□□□ -0.72
KIFC1-213	ENST00000486695	PPP4R3B	Q5MIZ7	849 aa		10.54	□□□□□ -0.72
KIFC1-213	ENST00000486695	TRIM22	Q8IYM9	498 aa		10.54	□□□□□ -0.72
KIFC1-213	ENST00000486695	HS6ST3	Q8IZP7	471 aa		10.54	□□□□□ -0.72
KIFC1-213	ENST00000486695	SLC44A5	Q8NCS7	719 aa		10.54	□□□□□ -0.72
KIFC1-213	ENST00000486695	CTCFL	Q8NI51	663 aa	Predicted RBP	10.54	□□□□□ -0.72
KIFC1-213	ENST00000486695	WASF1	Q92558	559 aa		10.54	□□□□□ -0.72
KIFC1-213	ENST00000486695	MYL10	Q9BUA6	226 aa		10.54	□□□□□ -0.72
KIFC1-213	ENST00000486695	ORC3	Q9UBD5	711 aa	Predicted RBP	10.54	□□□□□ -0.72
KIFC1-213	ENST00000486695	ZNF70	Q9UC06	446 aa	Predicted RBP	10.54	□□□□□ -0.72
KIFC1-213	ENST00000486695	FAM198A	Q9UFP1	575 aa		10.54	□□□□□ -0.72
KIFC1-213	ENST00000486695	GJA3	Q9Y6H8	435 aa		10.54	□□□□□ -0.72
KIFC1-213	ENST00000486695	MYH8	P13535	1937 aa		10.54	□□□□□ -0.72
KIFC1-213	ENST00000486695	NID2	Q14112	1375 aa		10.53	□□□□□ -0.72
KIFC1-213	ENST00000486695	NMT2	O60551	498 aa		10.53	□□□□□ -0.72
KIFC1-213	ENST00000486695	IFNAR1	P17181	557 aa		10.53	□□□□□ -0.72
KIFC1-213	ENST00000486695	CDC27	P30260	824 aa		10.53	□□□□□ -0.72
KIFC1-213	ENST00000486695	KIF5B	P33176	963 aa		10.53	□□□□□ -0.72
KIFC1-213	ENST00000486695	TNNI2	P48788	182 aa		10.53	□□□□□ -0.72
KIFC1-213	ENST00000486695	AKAP17A	Q02040	695 aa	Known RBP	10.53	□□□□□ -0.72
KIFC1-213	ENST00000486695	GABPA	Q06546	454 aa		10.53	□□□□□ -0.72
KIFC1-213	ENST00000486695	FSTL1	Q12841	308 aa		10.53	□□□□□ -0.72
KIFC1-213	ENST00000486695	FKBP1C	Q5VVH2	108 aa		10.53	□□□□□ -0.72
KIFC1-213	ENST00000486695	MCTP1	Q6DN14	999 aa		10.53	□□□□□ -0.72
KIFC1-213	ENST00000486695	ZFPM1	Q8IX07	1006 aa		10.53	□□□□□ -0.72
KIFC1-213	ENST00000486695	RGS22	Q8NE09	1264 aa		10.53	□□□□□ -0.72
KIFC1-213	ENST00000486695	FAM151A	Q8WW52	585 aa		10.53	□□□□□ -0.72
KIFC1-213	ENST00000486695	DPF2	Q92785	391 aa		10.53	□□□□□ -0.72
KIFC1-213	ENST00000486695	CCDC17	Q96LX7	622 aa		10.53	□□□□□ -0.72
KIFC1-213	ENST00000486695	RRAGC	Q9HB90	399 aa		10.53	□□□□□ -0.72
KIFC1-213	ENST00000486695	MYOZ2	Q9NPC6	264 aa		10.53	□□□□□ -0.72
KIFC1-213	ENST00000486695	STX8	Q9UNK0	236 aa		10.53	□□□□□ -0.72
KIFC1-213	ENST00000486695	COL2A1	P02458	1487 aa	Predicted RBP	10.53	□□□□□ -0.72
KIFC1-213	ENST00000486695	WDR90	Q96KV7	1748 aa		10.53	□□□□□ -0.72
KIFC1-213	ENST00000486695	CLRN2	A0PK11	232 aa		10.52	□□□□□ -0.73
KIFC1-213	ENST00000486695	TCP10L2	B9ZVM9	353 aa		10.52	□□□□□ -0.73
KIFC1-213	ENST00000486695	FMNL1	O95466	1100 aa	Predicted RBP	10.52	□□□□□ -0.73
KIFC1-213	ENST00000486695	FDPS	P14324	419 aa	Known RBP	10.52	□□□□□ -0.73
KIFC1-213	ENST00000486695	GMPS	P49915	693 aa	Predicted RBP	10.52	□□□□□ -0.73
KIFC1-213	ENST00000486695	ZNF280A	P59817	542 aa	Predicted RBP	10.52	□□□□□ -0.73
KIFC1-213	ENST00000486695	TRIM29	Q14134	588 aa		10.52	□□□□□ -0.73
KIFC1-213	ENST00000486695	RCSD1	Q6JBY9	416 aa		10.52	□□□□□ -0.73
KIFC1-213	ENST00000486695	C8orf76	Q96K31	380 aa		10.52	□□□□□ -0.73
KIFC1-213	ENST00000486695	MAP3K14	Q99558	947 aa		10.52	□□□□□ -0.73
KIFC1-213	ENST00000486695	SLC26A6	Q9BXS9	759 aa		10.52	□□□□□ -0.73
KIFC1-213	ENST00000486695	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	10.52	□□□□□ -0.73
KIFC1-213	ENST00000486695	VEZT	Q9HBM0	779 aa		10.52	□□□□□ -0.73
KIFC1-213	ENST00000486695	IL17RB	Q9NRM6	502 aa		10.52	□□□□□ -0.73
KIFC1-213	ENST00000486695	FAM217B	Q9NTX9	383 aa	Predicted RBP	10.52	□□□□□ -0.73
KIFC1-213	ENST00000486695	STK36	Q9NRP7	1315 aa		10.52	□□□□□ -0.73
KIFC1-213	ENST00000486695	DICER1	Q9UPY3	1922 aa	Known RBP	10.51	□□□□□ -0.73
KIFC1-213	ENST00000486695	DDTL	A6NHG4	134 aa	Predicted RBP	10.51	□□□□□ -0.73
KIFC1-213	ENST00000486695		H7C1D1	291 aa		10.51	□□□□□ -0.73
KIFC1-213	ENST00000486695	MPHOSPH10	O00566	681 aa	Known RBP	10.51	□□□□□ -0.73
KIFC1-213	ENST00000486695	TOP1	P11387	765 aa	Known RBP	10.51	□□□□□ -0.73
KIFC1-213	ENST00000486695	SHMT1	P34896	483 aa		10.51	□□□□□ -0.73
KIFC1-213	ENST00000486695	GNAQ	P50148	359 aa		10.51	□□□□□ -0.73
KIFC1-213	ENST00000486695	TROAP	Q12815	778 aa		10.51	□□□□□ -0.73
KIFC1-213	ENST00000486695	NTRK3	Q16288	839 aa		10.51	□□□□□ -0.73
KIFC1-213	ENST00000486695	CSPP1	Q1MSJ5	1256 aa		10.51	□□□□□ -0.73
KIFC1-213	ENST00000486695	SKOR2	Q2VWA4	1001 aa	Predicted RBP	10.51	□□□□□ -0.73
KIFC1-213	ENST00000486695	RBM26	Q5T8P6	1007 aa	Known RBP	10.51	□□□□□ -0.73
KIFC1-213	ENST00000486695	CDC37L1	Q7L3B6	337 aa		10.51	□□□□□ -0.73
KIFC1-213	ENST00000486695	FAM83A	Q86UY5	434 aa		10.51	□□□□□ -0.73
KIFC1-213	ENST00000486695	PNMA1	Q8ND90	353 aa		10.51	□□□□□ -0.73
KIFC1-213	ENST00000486695	PHKB	Q93100	1093 aa		10.51	□□□□□ -0.73
KIFC1-213	ENST00000486695	TMEM47	Q9BQJ4	181 aa		10.51	□□□□□ -0.73
KIFC1-213	ENST00000486695	ALG1	Q9BT22	464 aa		10.51	□□□□□ -0.73
KIFC1-213	ENST00000486695	HERC5	Q9UII4	1024 aa	Known RBP	10.51	□□□□□ -0.73
KIFC1-213	ENST00000486695	CNOT7	Q9UIV1	285 aa	Known RBP	10.51	□□□□□ -0.73
KIFC1-213	ENST00000486695	ATRNL1	Q5VV63	1379 aa		10.51	□□□□□ -0.73
KIFC1-213	ENST00000486695	WNT10B	O00744	389 aa		10.5	□□□□□ -0.73
KIFC1-213	ENST00000486695	PPFIA3	O75145	1194 aa		10.5	□□□□□ -0.73
KIFC1-213	ENST00000486695	DEXI	O95424	95 aa		10.5	□□□□□ -0.73
KIFC1-213	ENST00000486695	AKR1B1	P15121	316 aa		10.5	□□□□□ -0.73
KIFC1-213	ENST00000486695	XBP1	P17861	261 aa		10.5	□□□□□ -0.73
KIFC1-213	ENST00000486695	PRELP	P51888	382 aa		10.5	□□□□□ -0.73
KIFC1-213	ENST00000486695	FOSB	P53539	338 aa		10.5	□□□□□ -0.73
KIFC1-213	ENST00000486695	HTRA3	P83110	453 aa		10.5	□□□□□ -0.73
KIFC1-213	ENST00000486695	TNFAIP1	Q13829	316 aa		10.5	□□□□□ -0.73
KIFC1-213	ENST00000486695	CERKL	Q49MI3	558 aa	Predicted RBP	10.5	□□□□□ -0.73
KIFC1-213	ENST00000486695	SH3BP5L	Q7L8J4	393 aa		10.5	□□□□□ -0.73
KIFC1-213	ENST00000486695	MICALL2	Q8IY33	904 aa		10.5	□□□□□ -0.73
KIFC1-213	ENST00000486695	GPC2	Q8N158	579 aa		10.5	□□□□□ -0.73
KIFC1-213	ENST00000486695	KLRG1	Q96E93	195 aa		10.5	□□□□□ -0.73
KIFC1-213	ENST00000486695	CEP95	Q96GE4	821 aa		10.5	□□□□□ -0.73
KIFC1-213	ENST00000486695	ZBED3	Q96IU2	234 aa	Predicted RBP	10.5	□□□□□ -0.73
KIFC1-213	ENST00000486695	CSRNP1	Q96S65	589 aa		10.5	□□□□□ -0.73
KIFC1-213	ENST00000486695	LZTS2	Q9BRK4	669 aa		10.5	□□□□□ -0.73
KIFC1-213	ENST00000486695	RNF26	Q9BY78	433 aa	Predicted RBP	10.5	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms