RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 MTMR4Q9NYA4 1195 aa15.5■□□□□ 0.07
VTI1BP1-201ENST00000486325 CIZ1Q9ULV3 898 aaPredicted RBP15.5■□□□□ 0.07
VTI1BP1-201ENST00000486325 KIF3AQ9Y496 699 aa15.5■□□□□ 0.07
VTI1BP1-201ENST00000486325 IGKV6D-41A0A0C4DH26 115 aa15.49■□□□□ 0.07
VTI1BP1-201ENST00000486325 NMT2O60551 498 aa15.49■□□□□ 0.07
VTI1BP1-201ENST00000486325 CDKL5O76039 1030 aa15.49■□□□□ 0.07
VTI1BP1-201ENST00000486325 TTLL1O95922 423 aa15.49■□□□□ 0.07
VTI1BP1-201ENST00000486325 CCT2P78371 535 aaKnown RBP15.49■□□□□ 0.07
VTI1BP1-201ENST00000486325 HMGN5P82970 282 aaKnown RBP15.49■□□□□ 0.07
VTI1BP1-201ENST00000486325 SCRN1Q12765 414 aa15.49■□□□□ 0.07
VTI1BP1-201ENST00000486325 RCSD1Q6JBY9 416 aa15.49■□□□□ 0.07
VTI1BP1-201ENST00000486325 FANCBQ8NB91 859 aa15.49■□□□□ 0.07
VTI1BP1-201ENST00000486325 RBM28Q9NW13 759 aaKnown RBP15.49■□□□□ 0.07
VTI1BP1-201ENST00000486325 STX8Q9UNK0 236 aa15.49■□□□□ 0.07
VTI1BP1-201ENST00000486325 HPS5Q9UPZ3 1129 aa15.49■□□□□ 0.07
VTI1BP1-201ENST00000486325 SCN4AP35499 1836 aa15.48■□□□□ 0.07
VTI1BP1-201ENST00000486325 GOLGA8AA7E2F4 631 aa15.48■□□□□ 0.07
VTI1BP1-201ENST00000486325 VEGFAP15692 232 aaPredicted RBP15.48■□□□□ 0.07
VTI1BP1-201ENST00000486325 MIGA2Q7L4E1 593 aa15.48■□□□□ 0.07
VTI1BP1-201ENST00000486325 PNMA1Q8ND90 353 aa15.48■□□□□ 0.07
VTI1BP1-201ENST00000486325 MKL1Q969V6 931 aa15.48■□□□□ 0.07
VTI1BP1-201ENST00000486325 CEP95Q96GE4 821 aa15.48■□□□□ 0.07
VTI1BP1-201ENST00000486325 TMEM47Q9BQJ4 181 aa15.48■□□□□ 0.07
VTI1BP1-201ENST00000486325 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.48■□□□□ 0.07
VTI1BP1-201ENST00000486325 ZNF341Q9BYN7 854 aa15.48■□□□□ 0.07
VTI1BP1-201ENST00000486325 SENP2Q9HC62 589 aa15.48■□□□□ 0.07
VTI1BP1-201ENST00000486325 FOXD4L1Q9NU39 408 aa15.48■□□□□ 0.07
VTI1BP1-201ENST00000486325 CHMP5Q9NZZ3 219 aa15.48■□□□□ 0.07
VTI1BP1-201ENST00000486325 NYAP2Q9P242 653 aa15.48■□□□□ 0.07
VTI1BP1-201ENST00000486325 FAM196BA6NMK8 535 aa15.47■□□□□ 0.07
VTI1BP1-201ENST00000486325 CTNND1O60716 968 aaKnown RBP15.47■□□□□ 0.07
VTI1BP1-201ENST00000486325 PDCP20941 246 aa15.47■□□□□ 0.07
VTI1BP1-201ENST00000486325 KIF5BP33176 963 aa15.47■□□□□ 0.07
VTI1BP1-201ENST00000486325 CAP2P40123 477 aa15.47■□□□□ 0.07
VTI1BP1-201ENST00000486325 GNAQP50148 359 aa15.47■□□□□ 0.07
VTI1BP1-201ENST00000486325 TROAPQ12815 778 aa15.47■□□□□ 0.07
VTI1BP1-201ENST00000486325 RTN1Q16799 776 aa15.47■□□□□ 0.07
VTI1BP1-201ENST00000486325 NBPF12Q5TAG4 269 aaPredicted RBP15.47■□□□□ 0.07
VTI1BP1-201ENST00000486325 MICU3Q86XE3 530 aa15.47■□□□□ 0.07
VTI1BP1-201ENST00000486325 CTCFLQ8NI51 663 aaPredicted RBP15.47■□□□□ 0.07
VTI1BP1-201ENST00000486325 NUP133Q8WUM0 1156 aa15.47■□□□□ 0.07
VTI1BP1-201ENST00000486325 CLIP2Q9UDT6 1046 aa15.47■□□□□ 0.07
VTI1BP1-201ENST00000486325 SYNPO2Q9UMS6 1093 aa15.47■□□□□ 0.07
VTI1BP1-201ENST00000486325 NID2Q14112 1375 aa15.47■□□□□ 0.07
VTI1BP1-201ENST00000486325 POTECB2RU33 542 aa15.46■□□□□ 0.07
VTI1BP1-201ENST00000486325 ASNSP08243 561 aa15.46■□□□□ 0.07
VTI1BP1-201ENST00000486325 NUCB2P80303 420 aa15.46■□□□□ 0.07
VTI1BP1-201ENST00000486325 CDC37L1Q7L3B6 337 aa15.46■□□□□ 0.07
VTI1BP1-201ENST00000486325 KRT26Q7Z3Y9 468 aa15.46■□□□□ 0.07
VTI1BP1-201ENST00000486325 SMARCC2Q8TAQ2 1214 aa15.46■□□□□ 0.07
VTI1BP1-201ENST00000486325 LZTS2Q9BRK4 669 aa15.46■□□□□ 0.07
VTI1BP1-201ENST00000486325 MYH8P13535 1937 aa15.45■□□□□ 0.06
VTI1BP1-201ENST00000486325 PHF20L1A8MW92 1017 aa15.45■□□□□ 0.06
VTI1BP1-201ENST00000486325 GH2P01242 217 aa15.45■□□□□ 0.06
VTI1BP1-201ENST00000486325 GJB2P29033 226 aa15.45■□□□□ 0.06
VTI1BP1-201ENST00000486325 NF2P35240 595 aa15.45■□□□□ 0.06
VTI1BP1-201ENST00000486325 ADD1P35611 737 aaKnown RBP15.45■□□□□ 0.06
VTI1BP1-201ENST00000486325 ST3GAL1Q11201 340 aa15.45■□□□□ 0.06
VTI1BP1-201ENST00000486325 EAPPQ56P03 285 aaPredicted RBP15.45■□□□□ 0.06
VTI1BP1-201ENST00000486325 USP48Q86UV5 1035 aa15.45■□□□□ 0.06
VTI1BP1-201ENST00000486325 FAM184AQ8NB25 1140 aa15.45■□□□□ 0.06
VTI1BP1-201ENST00000486325 NCOA5Q9HCD5 579 aaKnown RBP15.45■□□□□ 0.06
VTI1BP1-201ENST00000486325 ZNF112Q9UJU3 913 aa15.45■□□□□ 0.06
VTI1BP1-201ENST00000486325 WDR90Q96KV7 1748 aa15.45■□□□□ 0.06
VTI1BP1-201ENST00000486325 PPP1R12BO60237 982 aaPredicted RBP15.44■□□□□ 0.06
VTI1BP1-201ENST00000486325 GDF11O95390 407 aa15.44■□□□□ 0.06
VTI1BP1-201ENST00000486325 SLURP2P0DP57 97 aa15.44■□□□□ 0.06
VTI1BP1-201ENST00000486325 IFNAR1P17181 557 aa15.44■□□□□ 0.06
VTI1BP1-201ENST00000486325 DDIT3P35638 169 aa15.44■□□□□ 0.06
VTI1BP1-201ENST00000486325 ICA1Q05084 483 aa15.44■□□□□ 0.06
VTI1BP1-201ENST00000486325 SEPT2Q15019 361 aa15.44■□□□□ 0.06
VTI1BP1-201ENST00000486325 RAB3GAP1Q15042 981 aa15.44■□□□□ 0.06
VTI1BP1-201ENST00000486325 CDAN1Q8IWY9 1227 aa15.44■□□□□ 0.06
VTI1BP1-201ENST00000486325 RGS22Q8NE09 1264 aa15.44■□□□□ 0.06
VTI1BP1-201ENST00000486325 NSUN7Q8NE18 718 aaKnown RBP15.44■□□□□ 0.06
VTI1BP1-201ENST00000486325 MYL10Q9BUA6 226 aa15.44■□□□□ 0.06
VTI1BP1-201ENST00000486325 SH2D4AQ9H788 454 aa15.44■□□□□ 0.06
VTI1BP1-201ENST00000486325 RRAGCQ9HB90 399 aa15.44■□□□□ 0.06
VTI1BP1-201ENST00000486325 ARHGEF10LQ9HCE6 1279 aa15.44■□□□□ 0.06
VTI1BP1-201ENST00000486325 FAM217BQ9NTX9 383 aaPredicted RBP15.44■□□□□ 0.06
VTI1BP1-201ENST00000486325 ZBTB21Q9ULJ3 1066 aa15.44■□□□□ 0.06
VTI1BP1-201ENST00000486325 SCAF8Q9UPN6 1271 aaKnown RBP15.44■□□□□ 0.06
VTI1BP1-201ENST00000486325 CLEC11AQ9Y240 323 aa15.44■□□□□ 0.06
VTI1BP1-201ENST00000486325 SIPA1L1O43166 1804 aa15.44■□□□□ 0.06
VTI1BP1-201ENST00000486325 CTDNEP1O95476 244 aa15.43■□□□□ 0.06
VTI1BP1-201ENST00000486325 EEF2P13639 858 aaKnown RBP15.43■□□□□ 0.06
VTI1BP1-201ENST00000486325 RXRAP19793 462 aa15.43■□□□□ 0.06
VTI1BP1-201ENST00000486325 SMARCA1P28370 1054 aa15.43■□□□□ 0.06
VTI1BP1-201ENST00000486325 CDC27P30260 824 aa15.43■□□□□ 0.06
VTI1BP1-201ENST00000486325 GUCY1A2P33402 732 aa15.43■□□□□ 0.06
VTI1BP1-201ENST00000486325 ATP2B2Q01814 1243 aa15.43■□□□□ 0.06
VTI1BP1-201ENST00000486325 AKAP17AQ02040 695 aaKnown RBP15.43■□□□□ 0.06
VTI1BP1-201ENST00000486325 SSRP1Q08945 709 aaKnown RBP15.43■□□□□ 0.06
VTI1BP1-201ENST00000486325 GRM4Q14833 912 aa15.43■□□□□ 0.06
VTI1BP1-201ENST00000486325 RAB11FIP4Q86YS3 637 aa15.43■□□□□ 0.06
VTI1BP1-201ENST00000486325 CCDC144CPQ8IYA2 1237 aa15.43■□□□□ 0.06
VTI1BP1-201ENST00000486325 TRIM22Q8IYM9 498 aa15.43■□□□□ 0.06
VTI1BP1-201ENST00000486325 WASF1Q92558 559 aa15.43■□□□□ 0.06
VTI1BP1-201ENST00000486325 RBM27Q9P2N5 1060 aaKnown RBP15.43■□□□□ 0.06
VTI1BP1-201ENST00000486325 POLR2AP24928 1970 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms