RNA–Protein interactions for RNA: ENST00000486263.1

NELFCD-209, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-209ENST00000486263 CCDC69A6NI79 296 aa16.3■□□□□ 0.2
NELFCD-209ENST00000486263 PHF20L1A8MW92 1017 aa16.3■□□□□ 0.2
NELFCD-209ENST00000486263 MAP2K2P36507 400 aa16.3■□□□□ 0.2
NELFCD-209ENST00000486263 ANTXR2P58335 489 aa16.3■□□□□ 0.2
NELFCD-209ENST00000486263 MAP3K9P80192 1104 aa16.3■□□□□ 0.2
NELFCD-209ENST00000486263 IFIT1BQ5T764 474 aaKnown RBP16.3■□□□□ 0.2
NELFCD-209ENST00000486263 SYNE3Q6ZMZ3 975 aa16.3■□□□□ 0.2
NELFCD-209ENST00000486263 KANSL2Q9H9L4 492 aa16.3■□□□□ 0.2
NELFCD-209ENST00000486263 ZNF112Q9UJU3 913 aa16.3■□□□□ 0.2
NELFCD-209ENST00000486263 ZBTB21Q9ULJ3 1066 aa16.3■□□□□ 0.2
NELFCD-209ENST00000486263 NAP1L2Q9ULW6 460 aaPredicted RBP16.3■□□□□ 0.2
NELFCD-209ENST00000486263 STX8Q9UNK0 236 aa16.3■□□□□ 0.2
NELFCD-209ENST00000486263 FZD1Q9UP38 647 aa16.3■□□□□ 0.2
NELFCD-209ENST00000486263 CSADQ9Y600 493 aa16.3■□□□□ 0.2
NELFCD-209ENST00000486263 PAPPA2Q9BXP8 1791 aa16.29■□□□□ 0.2
NELFCD-209ENST00000486263 NMT2O60551 498 aa16.29■□□□□ 0.2
NELFCD-209ENST00000486263 INPP5BP32019 993 aa16.29■□□□□ 0.2
NELFCD-209ENST00000486263 ANP32AP39687 249 aaKnown RBP16.29■□□□□ 0.2
NELFCD-209ENST00000486263 MAP2K1Q02750 393 aaPredicted RBP16.29■□□□□ 0.2
NELFCD-209ENST00000486263 SEPT2Q15019 361 aa16.29■□□□□ 0.2
NELFCD-209ENST00000486263 NOL8Q76FK4 1167 aaKnown RBP16.29■□□□□ 0.2
NELFCD-209ENST00000486263 NKX2-3Q8TAU0 364 aa16.29■□□□□ 0.2
NELFCD-209ENST00000486263 CEP95Q96GE4 821 aa16.29■□□□□ 0.2
NELFCD-209ENST00000486263 TTC14Q96N46 770 aa16.29■□□□□ 0.2
NELFCD-209ENST00000486263 THSD7BQ9C0I4 1608 aa16.29■□□□□ 0.2
NELFCD-209ENST00000486263 SSC5DA1L4H1 1573 aa16.29■□□□□ 0.2
NELFCD-209ENST00000486263 MYH8P13535 1937 aa16.29■□□□□ 0.2
NELFCD-209ENST00000486263 PLIN4Q96Q06 1357 aa16.28■□□□□ 0.2
NELFCD-209ENST00000486263 SH2B2O14492 632 aaPredicted RBP16.28■□□□□ 0.2
NELFCD-209ENST00000486263 TTLL1O95922 423 aa16.28■□□□□ 0.2
NELFCD-209ENST00000486263 MCM2P49736 904 aa16.28■□□□□ 0.2
NELFCD-209ENST00000486263 AK2P54819 239 aa16.28■□□□□ 0.2
NELFCD-209ENST00000486263 ICA1Q05084 483 aa16.28■□□□□ 0.2
NELFCD-209ENST00000486263 COL9A3Q14050 684 aaPredicted RBP16.28■□□□□ 0.2
NELFCD-209ENST00000486263 RRP1BQ14684 758 aaKnown RBP16.28■□□□□ 0.2
NELFCD-209ENST00000486263 CYP4F22Q6NT55 531 aa16.28■□□□□ 0.2
NELFCD-209ENST00000486263 RGMBQ6NW40 437 aa16.28■□□□□ 0.2
NELFCD-209ENST00000486263 PAXIP1Q6ZW49 1069 aaPredicted RBP16.28■□□□□ 0.2
NELFCD-209ENST00000486263 DGKHQ86XP1 1220 aa16.28■□□□□ 0.2
NELFCD-209ENST00000486263 ANKRD13AQ8IZ07 590 aa16.28■□□□□ 0.2
NELFCD-209ENST00000486263 SCYL3Q8IZE3 742 aa16.28■□□□□ 0.2
NELFCD-209ENST00000486263 IGDCC4Q8TDY8 1250 aa16.28■□□□□ 0.2
NELFCD-209ENST00000486263 BRF1Q92994 677 aa16.28■□□□□ 0.2
NELFCD-209ENST00000486263 ZKSCAN4Q969J2 545 aaPredicted RBP16.28■□□□□ 0.2
NELFCD-209ENST00000486263 CCDC102AQ96A19 550 aa16.28■□□□□ 0.2
NELFCD-209ENST00000486263 ALDH8A1Q9H2A2 487 aaPredicted RBP16.28■□□□□ 0.2
NELFCD-209ENST00000486263 KAT14Q9H8E8 782 aa16.28■□□□□ 0.2
NELFCD-209ENST00000486263 ARHGEF10LQ9HCE6 1279 aa16.28■□□□□ 0.2
NELFCD-209ENST00000486263 IL17RBQ9NRM6 502 aa16.28■□□□□ 0.2
NELFCD-209ENST00000486263 MTMR4Q9NYA4 1195 aa16.28■□□□□ 0.2
NELFCD-209ENST00000486263 CLIP2Q9UDT6 1046 aa16.28■□□□□ 0.2
NELFCD-209ENST00000486263 USP17L5A8MUK1 530 aa16.27■□□□□ 0.2
NELFCD-209ENST00000486263 HSPA1AP0DMV8 641 aaKnown RBP16.27■□□□□ 0.2
NELFCD-209ENST00000486263 HSPA1BP0DMV9 641 aaKnown RBP16.27■□□□□ 0.2
NELFCD-209ENST00000486263 LIFRP42702 1097 aa16.27■□□□□ 0.2
NELFCD-209ENST00000486263 NOGQ13253 232 aa16.27■□□□□ 0.2
NELFCD-209ENST00000486263 CATIPQ7Z7H3 387 aa16.27■□□□□ 0.2
NELFCD-209ENST00000486263 HSCBQ8IWL3 235 aa16.27■□□□□ 0.2
NELFCD-209ENST00000486263 ENAHQ8N8S7 591 aaPredicted RBP16.27■□□□□ 0.2
NELFCD-209ENST00000486263 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.27■□□□□ 0.2
NELFCD-209ENST00000486263 LY9Q9HBG7 655 aa16.27■□□□□ 0.2
NELFCD-209ENST00000486263 AS3MTQ9HBK9 375 aa16.27■□□□□ 0.2
NELFCD-209ENST00000486263 WBP1LQ9NX94 342 aa16.27■□□□□ 0.2
NELFCD-209ENST00000486263 IGKV6D-41A0A0C4DH26 115 aa16.26■□□□□ 0.19
NELFCD-209ENST00000486263 UBE2Q2LH0YL09 131 aa16.26■□□□□ 0.19
NELFCD-209ENST00000486263 TOP1P11387 765 aaKnown RBP16.26■□□□□ 0.19
NELFCD-209ENST00000486263 APOBRQ0VD83 1088 aa16.26■□□□□ 0.19
NELFCD-209ENST00000486263 MAP3K11Q16584 847 aa16.26■□□□□ 0.19
NELFCD-209ENST00000486263 SHROOM1Q2M3G4 852 aaPredicted RBP16.26■□□□□ 0.19
NELFCD-209ENST00000486263 NOL9Q5SY16 702 aaKnown RBP16.26■□□□□ 0.19
NELFCD-209ENST00000486263 MOB2Q70IA6 237 aa16.26■□□□□ 0.19
NELFCD-209ENST00000486263 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.26■□□□□ 0.19
NELFCD-209ENST00000486263 SH2D4AQ9H788 454 aa16.26■□□□□ 0.19
NELFCD-209ENST00000486263 GPHNQ9NQX3 736 aaPredicted RBP16.26■□□□□ 0.19
NELFCD-209ENST00000486263 NYAP2Q9P242 653 aa16.26■□□□□ 0.19
NELFCD-209ENST00000486263 RBM19Q9Y4C8 960 aaKnown RBP16.26■□□□□ 0.19
NELFCD-209ENST00000486263 SLC12A7Q9Y666 1083 aa16.26■□□□□ 0.19
NELFCD-209ENST00000486263 KLF18A0A0U1RQI7 1052 aa16.25■□□□□ 0.19
NELFCD-209ENST00000486263 UNCXA6NJT0 531 aa16.25■□□□□ 0.19
NELFCD-209ENST00000486263 RAD21O60216 631 aa16.25■□□□□ 0.19
NELFCD-209ENST00000486263 EEF2P13639 858 aaKnown RBP16.25■□□□□ 0.19
NELFCD-209ENST00000486263 JAG1P78504 1218 aa16.25■□□□□ 0.19
NELFCD-209ENST00000486263 TOB2Q14106 344 aaPredicted RBP16.25■□□□□ 0.19
NELFCD-209ENST00000486263 VGLL4Q14135 290 aa16.25■□□□□ 0.19
NELFCD-209ENST00000486263 BECN1Q14457 450 aa16.25■□□□□ 0.19
NELFCD-209ENST00000486263 SEC23AQ15436 765 aa16.25■□□□□ 0.19
NELFCD-209ENST00000486263 FBXL16Q8N461 479 aa16.25■□□□□ 0.19
NELFCD-209ENST00000486263 SLC10A4Q96EP9 437 aa16.25■□□□□ 0.19
NELFCD-209ENST00000486263 FEZ1Q99689 392 aa16.25■□□□□ 0.19
NELFCD-209ENST00000486263 LARP6Q9BRS8 491 aaKnown RBP16.25■□□□□ 0.19
NELFCD-209ENST00000486263 AGXT2Q9BYV1 514 aa16.25■□□□□ 0.19
NELFCD-209ENST00000486263 TBC1D2Q9BYX2 928 aa16.25■□□□□ 0.19
NELFCD-209ENST00000486263 LIMCH1Q9UPQ0 1083 aa16.25■□□□□ 0.19
NELFCD-209ENST00000486263 PTPRAP18433 802 aa16.24■□□□□ 0.19
NELFCD-209ENST00000486263 GUCY1A2P33402 732 aa16.24■□□□□ 0.19
NELFCD-209ENST00000486263 ZNF157P51786 506 aaPredicted RBP16.24■□□□□ 0.19
NELFCD-209ENST00000486263 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.24■□□□□ 0.19
NELFCD-209ENST00000486263 SGMS1Q86VZ5 419 aa16.24■□□□□ 0.19
NELFCD-209ENST00000486263 CLEC10AQ8IUN9 316 aa16.24■□□□□ 0.19
NELFCD-209ENST00000486263 PNMA1Q8ND90 353 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms