RNA–Protein interactions for RNA: ENST00000485610.5

SMARCD3-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best)

Gene SMARCD3, Length 1,480 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-212ENST00000485610 RCSD1Q6JBY9 416 aa20.8■□□□□ 0.92
SMARCD3-212ENST00000485610 NFXL1Q6ZNB6 911 aa20.8■□□□□ 0.92
SMARCD3-212ENST00000485610 ANKS1AQ92625 1134 aa20.8■□□□□ 0.92
SMARCD3-212ENST00000485610 KANSL2Q9H9L4 492 aa20.8■□□□□ 0.92
SMARCD3-212ENST00000485610 MTMR4Q9NYA4 1195 aa20.8■□□□□ 0.92
SMARCD3-212ENST00000485610 STX8Q9UNK0 236 aa20.8■□□□□ 0.92
SMARCD3-212ENST00000485610 CCDC69A6NI79 296 aa20.79■□□□□ 0.92
SMARCD3-212ENST00000485610 K7ELQ4 463 aaPredicted RBP20.79■□□□□ 0.92
SMARCD3-212ENST00000485610 NOVP48745 357 aa20.79■□□□□ 0.92
SMARCD3-212ENST00000485610 EVCP57679 992 aa20.79■□□□□ 0.92
SMARCD3-212ENST00000485610 APOBRQ0VD83 1088 aa20.79■□□□□ 0.92
SMARCD3-212ENST00000485610 SEPT2Q15019 361 aa20.79■□□□□ 0.92
SMARCD3-212ENST00000485610 KLRG1Q96E93 195 aa20.79■□□□□ 0.92
SMARCD3-212ENST00000485610 TBC1D2Q9BYX2 928 aa20.79■□□□□ 0.92
SMARCD3-212ENST00000485610 SENP2Q9HC62 589 aa20.79■□□□□ 0.92
SMARCD3-212ENST00000485610 KLF18A0A0U1RQI7 1052 aa20.78■□□□□ 0.92
SMARCD3-212ENST00000485610 TRAF5O00463 557 aa20.78■□□□□ 0.92
SMARCD3-212ENST00000485610 KIF3CO14782 793 aa20.78■□□□□ 0.92
SMARCD3-212ENST00000485610 TTLL1O95922 423 aa20.78■□□□□ 0.92
SMARCD3-212ENST00000485610 INPP5BP32019 993 aa20.78■□□□□ 0.92
SMARCD3-212ENST00000485610 GUCY1A2P33402 732 aa20.78■□□□□ 0.92
SMARCD3-212ENST00000485610 IREB2P48200 963 aaKnown RBP20.78■□□□□ 0.92
SMARCD3-212ENST00000485610 JAG1P78504 1218 aa20.78■□□□□ 0.92
SMARCD3-212ENST00000485610 ICA1Q05084 483 aa20.78■□□□□ 0.92
SMARCD3-212ENST00000485610 RAB3GAP1Q15042 981 aa20.78■□□□□ 0.92
SMARCD3-212ENST00000485610 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.78■□□□□ 0.92
SMARCD3-212ENST00000485610 ZSCAN31Q96LW9 406 aaPredicted RBP20.78■□□□□ 0.92
SMARCD3-212ENST00000485610 TPCN1Q9ULQ1 816 aa20.78■□□□□ 0.92
SMARCD3-212ENST00000485610 PTPRFP10586 1907 aa20.78■□□□□ 0.92
SMARCD3-212ENST00000485610 USP2O75604 605 aaPredicted RBP20.77■□□□□ 0.92
SMARCD3-212ENST00000485610 YY1P25490 414 aa20.77■□□□□ 0.92
SMARCD3-212ENST00000485610 PRKG1Q13976 671 aa20.77■□□□□ 0.92
SMARCD3-212ENST00000485610 NOL9Q5SY16 702 aaKnown RBP20.77■□□□□ 0.92
SMARCD3-212ENST00000485610 APOA5Q6Q788 366 aa20.77■□□□□ 0.92
SMARCD3-212ENST00000485610 CLEC10AQ8IUN9 316 aa20.77■□□□□ 0.92
SMARCD3-212ENST00000485610 SCYL3Q8IZE3 742 aa20.77■□□□□ 0.92
SMARCD3-212ENST00000485610 LARP6Q9BRS8 491 aaKnown RBP20.77■□□□□ 0.92
SMARCD3-212ENST00000485610 KAT14Q9H8E8 782 aa20.77■□□□□ 0.92
SMARCD3-212ENST00000485610 SH2B1Q9NRF2 756 aaPredicted RBP20.77■□□□□ 0.92
SMARCD3-212ENST00000485610 BRPF3Q9ULD4 1205 aa20.77■□□□□ 0.92
SMARCD3-212ENST00000485610 FZD1Q9UP38 647 aa20.77■□□□□ 0.92
SMARCD3-212ENST00000485610 MYH6P13533 1939 aa20.77■□□□□ 0.92
SMARCD3-212ENST00000485610 GOLGA8BA8MQT2 603 aa20.76■□□□□ 0.91
SMARCD3-212ENST00000485610 TOP1P11387 765 aaKnown RBP20.76■□□□□ 0.91
SMARCD3-212ENST00000485610 MAP3K11Q16584 847 aa20.76■□□□□ 0.91
SMARCD3-212ENST00000485610 ZNF654Q8IZM8 581 aa20.76■□□□□ 0.91
SMARCD3-212ENST00000485610 ZNF274Q96GC6 653 aaPredicted RBP20.76■□□□□ 0.91
SMARCD3-212ENST00000485610 TMEM47Q9BQJ4 181 aa20.76■□□□□ 0.91
SMARCD3-212ENST00000485610 NYAP2Q9P242 653 aa20.76■□□□□ 0.91
SMARCD3-212ENST00000485610 NAP1L2Q9ULW6 460 aaPredicted RBP20.76■□□□□ 0.91
SMARCD3-212ENST00000485610 SLC12A7Q9Y666 1083 aa20.76■□□□□ 0.91
SMARCD3-212ENST00000485610 RCAN1P53805 252 aa20.75■□□□□ 0.91
SMARCD3-212ENST00000485610 TTLL12Q14166 644 aaPredicted RBP20.75■□□□□ 0.91
SMARCD3-212ENST00000485610 SYNE3Q6ZMZ3 975 aa20.75■□□□□ 0.91
SMARCD3-212ENST00000485610 ARMC9Q7Z3E5 817 aa20.75■□□□□ 0.91
SMARCD3-212ENST00000485610 CATIPQ7Z7H3 387 aa20.75■□□□□ 0.91
SMARCD3-212ENST00000485610 TMX3Q96JJ7 454 aa20.75■□□□□ 0.91
SMARCD3-212ENST00000485610 NID2Q14112 1375 aa20.75■□□□□ 0.91
SMARCD3-212ENST00000485610 DDAH1O94760 285 aa20.75■□□□□ 0.91
SMARCD3-212ENST00000485610 LARGE1O95461 756 aa20.75■□□□□ 0.91
SMARCD3-212ENST00000485610 MAP3K9P80192 1104 aa20.75■□□□□ 0.91
SMARCD3-212ENST00000485610 ME3Q16798 604 aa20.75■□□□□ 0.91
SMARCD3-212ENST00000485610 PNMA1Q8ND90 353 aa20.75■□□□□ 0.91
SMARCD3-212ENST00000485610 ZKSCAN4Q969J2 545 aaPredicted RBP20.75■□□□□ 0.91
SMARCD3-212ENST00000485610 ZNF408Q9H9D4 720 aa20.75■□□□□ 0.91
SMARCD3-212ENST00000485610 ARHGEF10LQ9HCE6 1279 aa20.75■□□□□ 0.91
SMARCD3-212ENST00000485610 PICK1Q9NRD5 415 aa20.75■□□□□ 0.91
SMARCD3-212ENST00000485610 CLIP2Q9UDT6 1046 aa20.75■□□□□ 0.91
SMARCD3-212ENST00000485610 CSADQ9Y600 493 aa20.75■□□□□ 0.91
SMARCD3-212ENST00000485610 ZBTB43O43298 467 aa20.74■□□□□ 0.91
SMARCD3-212ENST00000485610 ITGBL1O95965 494 aaPredicted RBP20.74■□□□□ 0.91
SMARCD3-212ENST00000485610 EEF2P13639 858 aaKnown RBP20.74■□□□□ 0.91
SMARCD3-212ENST00000485610 PDIA3P30101 505 aaKnown RBP20.74■□□□□ 0.91
SMARCD3-212ENST00000485610 FKBP1BP68106 108 aa20.74■□□□□ 0.91
SMARCD3-212ENST00000485610 ATP2B2Q01814 1243 aa20.74■□□□□ 0.91
SMARCD3-212ENST00000485610 MICU3Q86XE3 530 aa20.74■□□□□ 0.91
SMARCD3-212ENST00000485610 LRRC47Q8N1G4 583 aaKnown RBP20.74■□□□□ 0.91
SMARCD3-212ENST00000485610 SLKQ9H2G2 1235 aaPredicted RBP20.74■□□□□ 0.91
SMARCD3-212ENST00000485610 SYNPO2Q9UMS6 1093 aa20.74■□□□□ 0.91
SMARCD3-212ENST00000485610 PFKFB2O60825 505 aa20.73■□□□□ 0.91
SMARCD3-212ENST00000485610 CALM1P0DP23 149 aa20.73■□□□□ 0.91
SMARCD3-212ENST00000485610 CALM2P0DP24 149 aa20.73■□□□□ 0.91
SMARCD3-212ENST00000485610 CALM3P0DP25 149 aa20.73■□□□□ 0.91
SMARCD3-212ENST00000485610 FMR1Q06787 632 aaKnown RBP eCLIP20.73■□□□□ 0.91
SMARCD3-212ENST00000485610 ANKRD13AQ8IZ07 590 aa20.73■□□□□ 0.91
SMARCD3-212ENST00000485610 SMC1BQ8NDV3 1235 aa20.73■□□□□ 0.91
SMARCD3-212ENST00000485610 MKL1Q969V6 931 aa20.73■□□□□ 0.91
SMARCD3-212ENST00000485610 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.73■□□□□ 0.91
SMARCD3-212ENST00000485610 USP17L5A8MUK1 530 aa20.72■□□□□ 0.91
SMARCD3-212ENST00000485610 STK3Q13188 491 aa20.72■□□□□ 0.91
SMARCD3-212ENST00000485610 VGLL4Q14135 290 aa20.72■□□□□ 0.91
SMARCD3-212ENST00000485610 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.72■□□□□ 0.91
SMARCD3-212ENST00000485610 SIAH1Q8IUQ4 282 aa20.72■□□□□ 0.91
SMARCD3-212ENST00000485610 GTF3C6Q969F1 213 aa20.72■□□□□ 0.91
SMARCD3-212ENST00000485610 MYL10Q9BUA6 226 aa20.72■□□□□ 0.91
SMARCD3-212ENST00000485610 SH2D4AQ9H788 454 aa20.72■□□□□ 0.91
SMARCD3-212ENST00000485610 GBA2Q9HCG7 927 aaPredicted RBP20.72■□□□□ 0.91
SMARCD3-212ENST00000485610 HPS5Q9UPZ3 1129 aa20.72■□□□□ 0.91
SMARCD3-212ENST00000485610 SNCAIPQ9Y6H5 919 aa20.72■□□□□ 0.91
SMARCD3-212ENST00000485610 GOLGA8AA7E2F4 631 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms