RNA–Protein interactions for RNA: ENST00000485454.1

SFPQ-209, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 339 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-209ENST00000485454 CAPN6Q9Y6Q1 641 aa5.71□□□□□ -1.5
SFPQ-209ENST00000485454 RBM47A0AV96 593 aaKnown RBP5.7□□□□□ -1.5
SFPQ-209ENST00000485454 TLR3O15455 904 aaKnown RBP5.7□□□□□ -1.5
SFPQ-209ENST00000485454 GREM1O60565 184 aa5.7□□□□□ -1.5
SFPQ-209ENST00000485454 HTR3BO95264 441 aa5.7□□□□□ -1.5
SFPQ-209ENST00000485454 IKZF1Q13422 519 aa5.7□□□□□ -1.5
SFPQ-209ENST00000485454 CWF19L2Q2TBE0 894 aaKnown RBP5.7□□□□□ -1.5
SFPQ-209ENST00000485454 LDLRAD1Q5T700 205 aa5.7□□□□□ -1.5
SFPQ-209ENST00000485454 CDKAL1Q5VV42 579 aa5.7□□□□□ -1.5
SFPQ-209ENST00000485454 DNAJB8Q8NHS0 232 aa5.7□□□□□ -1.5
SFPQ-209ENST00000485454 CYB5D2Q8WUJ1 264 aa5.7□□□□□ -1.5
SFPQ-209ENST00000485454 ZNF296Q8WUU4 475 aaPredicted RBP5.7□□□□□ -1.5
SFPQ-209ENST00000485454 HSPA12BQ96MM6 686 aa5.7□□□□□ -1.5
SFPQ-209ENST00000485454 LRRC3Q9BY71 257 aa5.7□□□□□ -1.5
SFPQ-209ENST00000485454 SEMA3GQ9NS98 782 aa5.7□□□□□ -1.5
SFPQ-209ENST00000485454 ST14Q9Y5Y6 855 aa5.7□□□□□ -1.5
SFPQ-209ENST00000485454 ARID1BQ8NFD5 2236 aaPredicted RBP5.7□□□□□ -1.5
SFPQ-209ENST00000485454 H3BS24 57 aa5.69□□□□□ -1.5
SFPQ-209ENST00000485454 RNASE1P07998 156 aaKnown RBP5.69□□□□□ -1.5
SFPQ-209ENST00000485454 TRIM26Q12899 539 aaPredicted RBP5.69□□□□□ -1.5
SFPQ-209ENST00000485454 SLC23A3Q6PIS1 610 aa5.69□□□□□ -1.5
SFPQ-209ENST00000485454 SLFN12Q8IYM2 578 aa5.69□□□□□ -1.5
SFPQ-209ENST00000485454 POU5F2Q8N7G0 328 aa5.69□□□□□ -1.5
SFPQ-209ENST00000485454 PPP1R13LQ8WUF5 828 aa5.69□□□□□ -1.5
SFPQ-209ENST00000485454 BACH2Q9BYV9 841 aa5.69□□□□□ -1.5
SFPQ-209ENST00000485454 RC3H2Q9HBD1 1191 aaKnown RBP5.69□□□□□ -1.5
SFPQ-209ENST00000485454 MBNL3Q9NUK0 354 aaKnown RBP5.69□□□□□ -1.5
SFPQ-209ENST00000485454 KLHL3Q9UH77 587 aa5.69□□□□□ -1.5
SFPQ-209ENST00000485454 ADAMTS6Q9UKP5 1117 aa5.69□□□□□ -1.5
SFPQ-209ENST00000485454 CHURC1-FNTBB4DL54 471 aa5.68□□□□□ -1.5
SFPQ-209ENST00000485454 C8AP07357 584 aa5.68□□□□□ -1.5
SFPQ-209ENST00000485454 JAG1P78504 1218 aa5.68□□□□□ -1.5
SFPQ-209ENST00000485454 ZP2Q05996 745 aa5.68□□□□□ -1.5
SFPQ-209ENST00000485454 TNK2Q07912 1038 aa5.68□□□□□ -1.5
SFPQ-209ENST00000485454 MLECQ14165 292 aa5.68□□□□□ -1.5
SFPQ-209ENST00000485454 THAP5Q7Z6K1 395 aa5.68□□□□□ -1.5
SFPQ-209ENST00000485454 PIWIL2Q8TC59 973 aaKnown RBP5.68□□□□□ -1.5
SFPQ-209ENST00000485454 BRMS1Q9HCU9 246 aa5.68□□□□□ -1.5
SFPQ-209ENST00000485454 ATP13A1Q9HD20 1204 aa5.68□□□□□ -1.5
SFPQ-209ENST00000485454 LMCD1Q9NZU5 365 aa5.68□□□□□ -1.5
SFPQ-209ENST00000485454 ADAMTS1Q9UHI8 967 aa5.68□□□□□ -1.5
SFPQ-209ENST00000485454 BIN1O00499 593 aa5.67□□□□□ -1.5
SFPQ-209ENST00000485454 PAPLNO95428 1278 aa5.67□□□□□ -1.5
SFPQ-209ENST00000485454 ZNF76P36508 570 aa5.67□□□□□ -1.5
SFPQ-209ENST00000485454 LRRN4CLQ8ND94 238 aa5.67□□□□□ -1.5
SFPQ-209ENST00000485454 CCDC74BQ96LY2 380 aa5.67□□□□□ -1.5
SFPQ-209ENST00000485454 PRDM7Q9NQW5 492 aa5.67□□□□□ -1.5
SFPQ-209ENST00000485454 METTL5Q9NRN9 209 aaKnown RBP5.67□□□□□ -1.5
SFPQ-209ENST00000485454 PCDHB14Q9Y5E9 798 aa5.67□□□□□ -1.5
SFPQ-209ENST00000485454 RBAK-RBAKDNI3L0D1 243 aa5.66□□□□□ -1.5
SFPQ-209ENST00000485454 DNAJA2O60884 412 aa5.66□□□□□ -1.5
SFPQ-209ENST00000485454 ATE1O95260 518 aa5.66□□□□□ -1.5
SFPQ-209ENST00000485454 CRKP46108 304 aa5.66□□□□□ -1.5
SFPQ-209ENST00000485454 TNNI2P48788 182 aa5.66□□□□□ -1.5
SFPQ-209ENST00000485454 ATG4DQ86TL0 474 aaPredicted RBP5.66□□□□□ -1.5
SFPQ-209ENST00000485454 PHACTR4Q8IZ21 702 aa5.66□□□□□ -1.5
SFPQ-209ENST00000485454 BAHD1Q8TBE0 780 aaPredicted RBP5.66□□□□□ -1.5
SFPQ-209ENST00000485454 RNF141Q8WVD5 230 aa5.66□□□□□ -1.5
SFPQ-209ENST00000485454 UBE2FQ969M7 185 aa5.66□□□□□ -1.5
SFPQ-209ENST00000485454 Q96M66 194 aa5.66□□□□□ -1.5
SFPQ-209ENST00000485454 NT5C1AQ9BXI3 368 aa5.66□□□□□ -1.5
SFPQ-209ENST00000485454 CARS2Q9HA77 564 aaKnown RBP5.66□□□□□ -1.5
SFPQ-209ENST00000485454 UBP1Q9NZI7 540 aa5.66□□□□□ -1.5
SFPQ-209ENST00000485454 ZSWIM5Q9P217 1185 aa5.66□□□□□ -1.5
SFPQ-209ENST00000485454 KCNH3Q9ULD8 1083 aa5.66□□□□□ -1.5
SFPQ-209ENST00000485454 SLC22A31A6NKX4 558 aa5.65□□□□□ -1.5
SFPQ-209ENST00000485454 VAMP1P23763 118 aa5.65□□□□□ -1.5
SFPQ-209ENST00000485454 FANCCQ00597 558 aa5.65□□□□□ -1.5
SFPQ-209ENST00000485454 APOBRQ0VD83 1088 aa5.65□□□□□ -1.5
SFPQ-209ENST00000485454 SEZ6Q53EL9 994 aa5.65□□□□□ -1.5
SFPQ-209ENST00000485454 KIAA0825Q8IV33 1275 aa5.65□□□□□ -1.5
SFPQ-209ENST00000485454 NKD1Q969G9 470 aa5.65□□□□□ -1.5
SFPQ-209ENST00000485454 SPON2Q9BUD6 331 aa5.65□□□□□ -1.5
SFPQ-209ENST00000485454 EHMT1Q9H9B1 1298 aa5.65□□□□□ -1.5
SFPQ-209ENST00000485454 RGS13O14921 159 aa5.64□□□□□ -1.51
SFPQ-209ENST00000485454 GBP1P32455 592 aa5.64□□□□□ -1.51
SFPQ-209ENST00000485454 MCM4P33991 863 aa5.64□□□□□ -1.51
SFPQ-209ENST00000485454 ARSHQ5FYA8 562 aa5.64□□□□□ -1.51
SFPQ-209ENST00000485454 USP48Q86UV5 1035 aa5.64□□□□□ -1.51
SFPQ-209ENST00000485454 SLITRK4Q8IW52 837 aa5.64□□□□□ -1.51
SFPQ-209ENST00000485454 REXO1Q8N1G1 1221 aaKnown RBP5.64□□□□□ -1.51
SFPQ-209ENST00000485454 DTWD2Q8NBA8 298 aa5.64□□□□□ -1.51
SFPQ-209ENST00000485454 RNF34Q969K3 372 aa5.64□□□□□ -1.51
SFPQ-209ENST00000485454 EAF1Q96JC9 268 aaPredicted RBP5.64□□□□□ -1.51
SFPQ-209ENST00000485454 KREMEN1Q96MU8 473 aa5.64□□□□□ -1.51
SFPQ-209ENST00000485454 KIF2CQ99661 725 aa5.64□□□□□ -1.51
SFPQ-209ENST00000485454 GPR62Q9BZJ7 368 aa5.64□□□□□ -1.51
SFPQ-209ENST00000485454 DUSP15Q9H1R2 295 aaPredicted RBP5.64□□□□□ -1.51
SFPQ-209ENST00000485454 TRIT1Q9H3H1 467 aaKnown RBP5.64□□□□□ -1.51
SFPQ-209ENST00000485454 GMIPQ9P107 970 aa5.64□□□□□ -1.51
SFPQ-209ENST00000485454 LRRN2O75325 713 aa5.63□□□□□ -1.51
SFPQ-209ENST00000485454 RECKO95980 971 aa5.63□□□□□ -1.51
SFPQ-209ENST00000485454 SRFP11831 508 aa5.63□□□□□ -1.51
SFPQ-209ENST00000485454 RAG1P15918 1043 aa5.63□□□□□ -1.51
SFPQ-209ENST00000485454 ZNF165P49910 485 aa5.63□□□□□ -1.51
SFPQ-209ENST00000485454 CHMP4BP1P59074 171 aa5.63□□□□□ -1.51
SFPQ-209ENST00000485454 CLCQ05315 142 aa5.63□□□□□ -1.51
SFPQ-209ENST00000485454 LCE1DQ5T752 114 aa5.63□□□□□ -1.51
SFPQ-209ENST00000485454 GK5Q6ZS86 529 aa5.63□□□□□ -1.51
SFPQ-209ENST00000485454 TMPRSS7Q7RTY8 843 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms