RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 NECAB2Q7Z6G3 386 aa16.09■□□□□ 0.17
UBA3-210ENST00000485424 RPAP2Q8IXW5 612 aaPredicted RBP16.09■□□□□ 0.17
UBA3-210ENST00000485424 ANKLE1Q8NAG6 615 aa16.09■□□□□ 0.17
UBA3-210ENST00000485424 RHPN1Q8TCX5 695 aa16.09■□□□□ 0.17
UBA3-210ENST00000485424 KIF1BPQ96EK5 621 aa16.09■□□□□ 0.17
UBA3-210ENST00000485424 TXNRD2Q9NNW7 524 aa16.09■□□□□ 0.17
UBA3-210ENST00000485424 ZBTB21Q9ULJ3 1066 aa16.09■□□□□ 0.17
UBA3-210ENST00000485424 COG6Q9Y2V7 657 aa16.09■□□□□ 0.17
UBA3-210ENST00000485424 NDUFB9Q9Y6M9 179 aa16.09■□□□□ 0.17
UBA3-210ENST00000485424 RPTORQ8N122 1335 aa16.09■□□□□ 0.17
UBA3-210ENST00000485424 MYH4Q9Y623 1939 aa16.09■□□□□ 0.17
UBA3-210ENST00000485424 CUL9Q8IWT3 2517 aa16.08■□□□□ 0.17
UBA3-210ENST00000485424 A0A1W2PPC1 479 aa16.08■□□□□ 0.16
UBA3-210ENST00000485424 USP17L10C9JJH3 530 aa16.08■□□□□ 0.16
UBA3-210ENST00000485424 HERVK_113P62684 666 aa16.08■□□□□ 0.16
UBA3-210ENST00000485424 TTC6Q86TZ1 520 aa16.08■□□□□ 0.16
UBA3-210ENST00000485424 CCAR1Q8IX12 1150 aaKnown RBP16.08■□□□□ 0.16
UBA3-210ENST00000485424 P2RX7Q99572 595 aaKnown RBP16.08■□□□□ 0.16
UBA3-210ENST00000485424 FEZ1Q99689 392 aa16.08■□□□□ 0.16
UBA3-210ENST00000485424 HMX1Q9NP08 348 aaPredicted RBP16.08■□□□□ 0.16
UBA3-210ENST00000485424 UNC80Q8N2C7 3258 aa16.07■□□□□ 0.16
UBA3-210ENST00000485424 MAGEB6P1A0A0J9YX57 407 aa16.07■□□□□ 0.16
UBA3-210ENST00000485424 ATXN8OSP0DMR3 200 aa16.07■□□□□ 0.16
UBA3-210ENST00000485424 MNX1P50219 401 aaPredicted RBP16.07■□□□□ 0.16
UBA3-210ENST00000485424 ANTXR1Q9H6X2 564 aa16.07■□□□□ 0.16
UBA3-210ENST00000485424 SOX1O00570 391 aaPredicted RBP16.06■□□□□ 0.16
UBA3-210ENST00000485424 POLR3DP05423 398 aaPredicted RBP16.06■□□□□ 0.16
UBA3-210ENST00000485424 PRKAR2AP13861 404 aaKnown RBP16.06■□□□□ 0.16
UBA3-210ENST00000485424 CYP2B6P20813 491 aa16.06■□□□□ 0.16
UBA3-210ENST00000485424 MAP3K21Q5TCX8 1036 aa16.06■□□□□ 0.16
UBA3-210ENST00000485424 C7orf61Q8IZ16 206 aa16.06■□□□□ 0.16
UBA3-210ENST00000485424 GPRC5AQ8NFJ5 357 aa16.06■□□□□ 0.16
UBA3-210ENST00000485424 SOCS4Q8WXH5 440 aa16.06■□□□□ 0.16
UBA3-210ENST00000485424 DNAJC2Q99543 621 aaKnown RBP16.06■□□□□ 0.16
UBA3-210ENST00000485424 CWC22Q9HCG8 908 aaKnown RBP16.06■□□□□ 0.16
UBA3-210ENST00000485424 CABP5Q9NP86 173 aa16.06■□□□□ 0.16
UBA3-210ENST00000485424 STAP2Q9UGK3 403 aa16.06■□□□□ 0.16
UBA3-210ENST00000485424 SERPINB13Q9UIV8 391 aa16.06■□□□□ 0.16
UBA3-210ENST00000485424 RCAN3Q9UKA8 241 aa16.06■□□□□ 0.16
UBA3-210ENST00000485424 GREB1LQ9C091 1923 aaPredicted RBP16.06■□□□□ 0.16
UBA3-210ENST00000485424 RAB11FIP3O75154 756 aa16.05■□□□□ 0.16
UBA3-210ENST00000485424 ERVK-9P63128 1117 aa16.05■□□□□ 0.16
UBA3-210ENST00000485424 ERVK-24P63145 666 aa16.05■□□□□ 0.16
UBA3-210ENST00000485424 SLC9C2Q5TAH2 1124 aa16.05■□□□□ 0.16
UBA3-210ENST00000485424 USP17L2Q6R6M4 530 aa16.05■□□□□ 0.16
UBA3-210ENST00000485424 POTEEQ6S8J3 1075 aa16.05■□□□□ 0.16
UBA3-210ENST00000485424 NUDT12Q9BQG2 462 aa16.05■□□□□ 0.16
UBA3-210ENST00000485424 CRNKL1Q9BZJ0 848 aaKnown RBP16.05■□□□□ 0.16
UBA3-210ENST00000485424 PORCNQ9H237 461 aa16.05■□□□□ 0.16
UBA3-210ENST00000485424 EMILIN3Q9NT22 766 aa16.05■□□□□ 0.16
UBA3-210ENST00000485424 RBPJLQ9UBG7 517 aa16.05■□□□□ 0.16
UBA3-210ENST00000485424 OGDHLQ9ULD0 1010 aa16.05■□□□□ 0.16
UBA3-210ENST00000485424 MCM3APO60318 1980 aa16.05■□□□□ 0.16
UBA3-210ENST00000485424 GOLIM4O00461 696 aa16.04■□□□□ 0.16
UBA3-210ENST00000485424 GH2P01242 217 aa16.04■□□□□ 0.16
UBA3-210ENST00000485424 XRCC5P13010 732 aaKnown RBP16.04■□□□□ 0.16
UBA3-210ENST00000485424 MAPK4P31152 587 aa16.04■□□□□ 0.16
UBA3-210ENST00000485424 PDE3AQ14432 1141 aa16.04■□□□□ 0.16
UBA3-210ENST00000485424 RAB3GAP1Q15042 981 aa16.04■□□□□ 0.16
UBA3-210ENST00000485424 ZYXQ15942 572 aaKnown RBP16.04■□□□□ 0.16
UBA3-210ENST00000485424 Q3C1V9 767 aa16.04■□□□□ 0.16
UBA3-210ENST00000485424 CERKLQ49MI3 558 aaPredicted RBP16.04■□□□□ 0.16
UBA3-210ENST00000485424 GTF3C2Q8WUA4 911 aaPredicted RBP16.04■□□□□ 0.16
UBA3-210ENST00000485424 USP6NLQ92738 828 aa16.04■□□□□ 0.16
UBA3-210ENST00000485424 LRCH3Q96II8 777 aa16.04■□□□□ 0.16
UBA3-210ENST00000485424 PAGR1Q9BTK6 254 aa16.04■□□□□ 0.16
UBA3-210ENST00000485424 NBPF3Q9H094 633 aa16.04■□□□□ 0.16
UBA3-210ENST00000485424 EHD4Q9H223 541 aa16.04■□□□□ 0.16
UBA3-210ENST00000485424 PFASO15067 1338 aa16.03■□□□□ 0.16
UBA3-210ENST00000485424 ZKSCAN1P17029 563 aaPredicted RBP16.03■□□□□ 0.16
UBA3-210ENST00000485424 ABCB5Q2M3G0 1257 aa16.03■□□□□ 0.16
UBA3-210ENST00000485424 TATDN1Q6P1N9 297 aa16.03■□□□□ 0.16
UBA3-210ENST00000485424 GPR142Q7Z601 462 aa16.03■□□□□ 0.16
UBA3-210ENST00000485424 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.03■□□□□ 0.16
UBA3-210ENST00000485424 GDF15Q99988 308 aa16.03■□□□□ 0.16
UBA3-210ENST00000485424 C11orf49Q9H6J7 331 aa16.03■□□□□ 0.16
UBA3-210ENST00000485424 ZBTB40Q9NUA8 1239 aa16.03■□□□□ 0.16
UBA3-210ENST00000485424 ZMYND8Q9ULU4 1186 aaPredicted RBP16.03■□□□□ 0.16
UBA3-210ENST00000485424 EYSQ5T1H1 3165 aa16.03■□□□□ 0.16
UBA3-210ENST00000485424 PDE6AP16499 860 aa16.02■□□□□ 0.16
UBA3-210ENST00000485424 USP14P54578 494 aa16.02■□□□□ 0.16
UBA3-210ENST00000485424 CACNB2Q08289 660 aaPredicted RBP16.02■□□□□ 0.16
UBA3-210ENST00000485424 CCL14Q16627 93 aa16.02■□□□□ 0.16
UBA3-210ENST00000485424 MORN1Q5T089 497 aa16.02■□□□□ 0.16
UBA3-210ENST00000485424 C12orf42Q96LP6 360 aa16.02■□□□□ 0.16
UBA3-210ENST00000485424 APBA2Q99767 749 aa16.02■□□□□ 0.16
UBA3-210ENST00000485424 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.02■□□□□ 0.16
UBA3-210ENST00000485424 MCM9Q9NXL9 1143 aa16.02■□□□□ 0.16
UBA3-210ENST00000485424 ZNF532Q9HCE3 1301 aa16.01■□□□□ 0.15
UBA3-210ENST00000485424 MPHOSPH10O00566 681 aaKnown RBP16.01■□□□□ 0.15
UBA3-210ENST00000485424 CNMDO75829 334 aa16.01■□□□□ 0.15
UBA3-210ENST00000485424 BMP8BP34820 402 aa16.01■□□□□ 0.15
UBA3-210ENST00000485424 RGS2P41220 211 aa16.01■□□□□ 0.15
UBA3-210ENST00000485424 PLEKHH3Q7Z736 793 aa16.01■□□□□ 0.15
UBA3-210ENST00000485424 AMOTL1Q8IY63 956 aa16.01■□□□□ 0.15
UBA3-210ENST00000485424 TRMT44Q8IYL2 757 aaKnown RBP16.01■□□□□ 0.15
UBA3-210ENST00000485424 USP17L15C9J2P7 530 aa16■□□□□ 0.15
UBA3-210ENST00000485424 USP17L13C9JLJ4 530 aa16■□□□□ 0.15
UBA3-210ENST00000485424 USP17L11C9JVI0 530 aa16■□□□□ 0.15
UBA3-210ENST00000485424 USP17L18D6R9N7 530 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms