RNA–Protein interactions for RNA: ENST00000485158.1

NUP188-206, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 392 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-206ENST00000485158 GH2P01242 217 aa16.78■□□□□ 0.28
NUP188-206ENST00000485158 CCNA1P78396 465 aa16.78■□□□□ 0.28
NUP188-206ENST00000485158 USP17L24Q0WX57 530 aa16.78■□□□□ 0.28
NUP188-206ENST00000485158 CATSPERGQ6ZRH7 1159 aa16.78■□□□□ 0.28
NUP188-206ENST00000485158 CCAR1Q8IX12 1150 aaKnown RBP16.78■□□□□ 0.28
NUP188-206ENST00000485158 EDC3Q96F86 508 aaKnown RBP16.78■□□□□ 0.28
NUP188-206ENST00000485158 PAGR1Q9BTK6 254 aa16.78■□□□□ 0.28
NUP188-206ENST00000485158 PIH1D3Q9NQM4 214 aaKnown RBP16.78■□□□□ 0.28
NUP188-206ENST00000485158 NOP58Q9Y2X3 529 aaKnown RBP16.78■□□□□ 0.28
NUP188-206ENST00000485158 FRMPD3Q5JV73 1810 aa16.77■□□□□ 0.28
NUP188-206ENST00000485158 SLC15A5A6NIM6 579 aa16.77■□□□□ 0.28
NUP188-206ENST00000485158 MSCO60682 206 aa16.77■□□□□ 0.28
NUP188-206ENST00000485158 GLRX3O76003 335 aaKnown RBP16.77■□□□□ 0.28
NUP188-206ENST00000485158 ZAP70P43403 619 aa16.77■□□□□ 0.28
NUP188-206ENST00000485158 USP14P54578 494 aa16.77■□□□□ 0.28
NUP188-206ENST00000485158 ATP8B2P98198 1209 aa16.77■□□□□ 0.28
NUP188-206ENST00000485158 FLRT1Q9NZU1 646 aa16.77■□□□□ 0.28
NUP188-206ENST00000485158 TNNQ9UQP3 1299 aa16.77■□□□□ 0.28
NUP188-206ENST00000485158 MYO5AQ9Y4I1 1855 aaKnown RBP16.77■□□□□ 0.27
NUP188-206ENST00000485158 PTPREP23469 700 aa16.76■□□□□ 0.27
NUP188-206ENST00000485158 GRB14Q14449 540 aa16.76■□□□□ 0.27
NUP188-206ENST00000485158 MFSD14CQ5VZR4 134 aa16.76■□□□□ 0.27
NUP188-206ENST00000485158 LPAR1Q92633 364 aa16.76■□□□□ 0.27
NUP188-206ENST00000485158 SAP30BPQ9UHR5 308 aaKnown RBP16.76■□□□□ 0.27
NUP188-206ENST00000485158 SERPINB13Q9UIV8 391 aa16.76■□□□□ 0.27
NUP188-206ENST00000485158 DBNLQ9UJU6 430 aaKnown RBP16.76■□□□□ 0.27
NUP188-206ENST00000485158 VCAM1P19320 739 aa16.75■□□□□ 0.27
NUP188-206ENST00000485158 CYP7A1P22680 504 aa16.75■□□□□ 0.27
NUP188-206ENST00000485158 DYNLL1P63167 89 aaKnown RBP16.75■□□□□ 0.27
NUP188-206ENST00000485158 DDX20Q9UHI6 824 aaKnown RBP16.75■□□□□ 0.27
NUP188-206ENST00000485158 MYH1P12882 1939 aa16.74■□□□□ 0.27
NUP188-206ENST00000485158 DNM1LO00429 736 aa16.74■□□□□ 0.27
NUP188-206ENST00000485158 BCAR3O75815 825 aa16.74■□□□□ 0.27
NUP188-206ENST00000485158 MDM2Q00987 491 aaPredicted RBP16.74■□□□□ 0.27
NUP188-206ENST00000485158 TTC6Q86TZ1 520 aa16.74■□□□□ 0.27
NUP188-206ENST00000485158 BTBD7Q9P203 1132 aa16.74■□□□□ 0.27
NUP188-206ENST00000485158 ZNF236Q9UL36 1845 aa16.73■□□□□ 0.27
NUP188-206ENST00000485158 SURF6O75683 361 aaKnown RBP16.73■□□□□ 0.27
NUP188-206ENST00000485158 CERKLQ49MI3 558 aaPredicted RBP16.73■□□□□ 0.27
NUP188-206ENST00000485158 TMEM57Q8N5G2 664 aa16.73■□□□□ 0.27
NUP188-206ENST00000485158 ACER1Q8TDN7 264 aa16.73■□□□□ 0.27
NUP188-206ENST00000485158 CLUAP1Q96AJ1 413 aa16.73■□□□□ 0.27
NUP188-206ENST00000485158 EAF2Q96CJ1 260 aaPredicted RBP16.73■□□□□ 0.27
NUP188-206ENST00000485158 FEZ1Q99689 392 aa16.73■□□□□ 0.27
NUP188-206ENST00000485158 SENP6Q9GZR1 1112 aaPredicted RBP16.73■□□□□ 0.27
NUP188-206ENST00000485158 VCANP13611 3396 aa16.73■□□□□ 0.27
NUP188-206ENST00000485158 SPDYE16A6NNV3 312 aaPredicted RBP16.72■□□□□ 0.27
NUP188-206ENST00000485158 CYBAP13498 195 aa16.72■□□□□ 0.27
NUP188-206ENST00000485158 GUCY1A2P33402 732 aa16.72■□□□□ 0.27
NUP188-206ENST00000485158 SHMT1P34896 483 aa16.72■□□□□ 0.27
NUP188-206ENST00000485158 ABCB5Q2M3G0 1257 aa16.72■□□□□ 0.27
NUP188-206ENST00000485158 OLFML2BQ68BL8 750 aa16.72■□□□□ 0.27
NUP188-206ENST00000485158 NPLOC4Q8TAT6 608 aa16.72■□□□□ 0.27
NUP188-206ENST00000485158 FRAT1Q92837 279 aaPredicted RBP16.72■□□□□ 0.27
NUP188-206ENST00000485158 GUCD1Q96NT3 240 aa16.72■□□□□ 0.27
NUP188-206ENST00000485158 TLR7Q9NYK1 1049 aaKnown RBP16.72■□□□□ 0.27
NUP188-206ENST00000485158 IVNS1ABPQ9Y6Y0 642 aa16.72■□□□□ 0.27
NUP188-206ENST00000485158 STRNO43815 780 aa16.71■□□□□ 0.27
NUP188-206ENST00000485158 IDH1O75874 414 aaKnown RBP16.71■□□□□ 0.27
NUP188-206ENST00000485158 USP5P45974 858 aa16.71■□□□□ 0.27
NUP188-206ENST00000485158 ATP2B2Q01814 1243 aa16.71■□□□□ 0.27
NUP188-206ENST00000485158 GABPAQ06546 454 aa16.71■□□□□ 0.27
NUP188-206ENST00000485158 OS9Q13438 667 aaPredicted RBP16.71■□□□□ 0.27
NUP188-206ENST00000485158 RAB3GAP1Q15042 981 aa16.71■□□□□ 0.27
NUP188-206ENST00000485158 ZYXQ15942 572 aaKnown RBP16.71■□□□□ 0.27
NUP188-206ENST00000485158 ZKSCAN2Q63HK3 967 aa16.71■□□□□ 0.27
NUP188-206ENST00000485158 MAGEB6Q8N7X4 407 aa16.71■□□□□ 0.27
NUP188-206ENST00000485158 MIGA1Q8NAN2 632 aa16.71■□□□□ 0.27
NUP188-206ENST00000485158 TRPV1Q8NER1 839 aa16.71■□□□□ 0.27
NUP188-206ENST00000485158 LBHD1Q9BQE6 289 aaPredicted RBP16.71■□□□□ 0.27
NUP188-206ENST00000485158 RIOK1Q9BRS2 568 aaKnown RBP16.71■□□□□ 0.27
NUP188-206ENST00000485158 CWC22Q9HCG8 908 aaKnown RBP16.71■□□□□ 0.27
NUP188-206ENST00000485158 EYSQ5T1H1 3165 aa16.71■□□□□ 0.26
NUP188-206ENST00000485158 CCER2I3L3R5 266 aa16.7■□□□□ 0.26
NUP188-206ENST00000485158 CYP2C19P33261 490 aa16.7■□□□□ 0.26
NUP188-206ENST00000485158 PLCD1P51178 756 aa16.7■□□□□ 0.26
NUP188-206ENST00000485158 MAP3K12Q12852 859 aa16.7■□□□□ 0.26
NUP188-206ENST00000485158 SNX17Q15036 470 aa16.7■□□□□ 0.26
NUP188-206ENST00000485158 SHCBP1Q8NEM2 672 aa16.7■□□□□ 0.26
NUP188-206ENST00000485158 RPAP3Q9H6T3 665 aaPredicted RBP16.7■□□□□ 0.26
NUP188-206ENST00000485158 CABP5Q9NP86 173 aa16.7■□□□□ 0.26
NUP188-206ENST00000485158 NDUFB9Q9Y6M9 179 aa16.7■□□□□ 0.26
NUP188-206ENST00000485158 LTBP2Q14767 1821 aa16.7■□□□□ 0.26
NUP188-206ENST00000485158 RLFQ13129 1914 aa16.69■□□□□ 0.26
NUP188-206ENST00000485158 COG2Q14746 738 aa16.69■□□□□ 0.26
NUP188-206ENST00000485158 C1orf53Q5VUE5 145 aa16.69■□□□□ 0.26
NUP188-206ENST00000485158 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.69■□□□□ 0.26
NUP188-206ENST00000485158 ARRDC4Q8NCT1 418 aa16.69■□□□□ 0.26
NUP188-206ENST00000485158 COL25A1Q9BXS0 654 aaPredicted RBP16.69■□□□□ 0.26
NUP188-206ENST00000485158 CCDC8Q9H0W5 538 aaPredicted RBP16.69■□□□□ 0.26
NUP188-206ENST00000485158 ANTXR1Q9H6X2 564 aa16.69■□□□□ 0.26
NUP188-206ENST00000485158 HOXC10Q9NYD6 342 aa16.69■□□□□ 0.26
NUP188-206ENST00000485158 A0A0G2JMZ2 1700 aa16.68■□□□□ 0.26
NUP188-206ENST00000485158 A0A1W2PRG0 241 aa16.68■□□□□ 0.26
NUP188-206ENST00000485158 WDR78Q5VTH9 848 aa16.68■□□□□ 0.26
NUP188-206ENST00000485158 ABRAQ8N0Z2 381 aa16.68■□□□□ 0.26
NUP188-206ENST00000485158 MOV10L1Q9BXT6 1211 aaKnown RBP16.68■□□□□ 0.26
NUP188-206ENST00000485158 PRUNE2Q8WUY3 3088 aa16.68■□□□□ 0.26
NUP188-206ENST00000485158 SPTBN5Q9NRC6 3674 aaKnown RBP16.67■□□□□ 0.26
NUP188-206ENST00000485158 CDH23Q9H251 3354 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms