RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 DHX16O60231 1041 aaKnown RBP23.92■■□□□ 1.42
VCPKMT-203ENST00000484763 DDAH1O94760 285 aa23.92■■□□□ 1.42
VCPKMT-203ENST00000484763 NOVP48745 357 aa23.92■■□□□ 1.42
VCPKMT-203ENST00000484763 PPP4R3BQ5MIZ7 849 aa23.92■■□□□ 1.42
VCPKMT-203ENST00000484763 MIGA2Q7L4E1 593 aa23.92■■□□□ 1.42
VCPKMT-203ENST00000484763 DCPSQ96C86 337 aaKnown RBP23.92■■□□□ 1.42
VCPKMT-203ENST00000484763 HOOK2Q96ED9 719 aa23.92■■□□□ 1.42
VCPKMT-203ENST00000484763 TAF1DQ9H5J8 278 aaPredicted RBP23.92■■□□□ 1.42
VCPKMT-203ENST00000484763 NCOA5Q9HCD5 579 aaKnown RBP23.92■■□□□ 1.42
VCPKMT-203ENST00000484763 ABCB5Q2M3G0 1257 aa23.91■■□□□ 1.42
VCPKMT-203ENST00000484763 TMEM179Q6ZVK1 233 aa23.91■■□□□ 1.42
VCPKMT-203ENST00000484763 ZC3H15Q8WU90 426 aaKnown RBP23.91■■□□□ 1.42
VCPKMT-203ENST00000484763 LLPHQ9BRT6 129 aaKnown RBP23.91■■□□□ 1.42
VCPKMT-203ENST00000484763 MTMR4Q9NYA4 1195 aa23.91■■□□□ 1.42
VCPKMT-203ENST00000484763 SMC3Q9UQE7 1217 aa23.91■■□□□ 1.42
VCPKMT-203ENST00000484763 GDF11O95390 407 aa23.91■■□□□ 1.42
VCPKMT-203ENST00000484763 CALM1P0DP23 149 aa23.91■■□□□ 1.42
VCPKMT-203ENST00000484763 CALM2P0DP24 149 aa23.91■■□□□ 1.42
VCPKMT-203ENST00000484763 CALM3P0DP25 149 aa23.91■■□□□ 1.42
VCPKMT-203ENST00000484763 RXRAP19793 462 aa23.91■■□□□ 1.42
VCPKMT-203ENST00000484763 DDIT3P35638 169 aa23.91■■□□□ 1.42
VCPKMT-203ENST00000484763 POTECB2RU33 542 aa23.9■■□□□ 1.42
VCPKMT-203ENST00000484763 NBPF12Q5TAG4 269 aaPredicted RBP23.9■■□□□ 1.42
VCPKMT-203ENST00000484763 PNMA1Q8ND90 353 aa23.9■■□□□ 1.42
VCPKMT-203ENST00000484763 NUP133Q8WUM0 1156 aa23.9■■□□□ 1.42
VCPKMT-203ENST00000484763 TMEM47Q9BQJ4 181 aa23.9■■□□□ 1.42
VCPKMT-203ENST00000484763 CABP5Q9NP86 173 aa23.9■■□□□ 1.42
VCPKMT-203ENST00000484763 MYH4Q9Y623 1939 aa23.9■■□□□ 1.42
VCPKMT-203ENST00000484763 TROAPQ12815 778 aa23.89■■□□□ 1.42
VCPKMT-203ENST00000484763 PNMA8AQ86V59 439 aaPredicted RBP23.89■■□□□ 1.42
VCPKMT-203ENST00000484763 SULF1Q8IWU6 871 aa23.89■■□□□ 1.42
VCPKMT-203ENST00000484763 ATAD5Q96QE3 1844 aa23.89■■□□□ 1.41
VCPKMT-203ENST00000484763 CPLX1O14810 134 aa23.89■■□□□ 1.41
VCPKMT-203ENST00000484763 TTLL1O95922 423 aa23.89■■□□□ 1.41
VCPKMT-203ENST00000484763 TOP1P11387 765 aaKnown RBP23.89■■□□□ 1.41
VCPKMT-203ENST00000484763 RRP1BQ14684 758 aaKnown RBP23.89■■□□□ 1.41
VCPKMT-203ENST00000484763 RTN1Q16799 776 aa23.89■■□□□ 1.41
VCPKMT-203ENST00000484763 DCAF15Q66K64 600 aa23.89■■□□□ 1.41
VCPKMT-203ENST00000484763 CCDC144CPQ8IYA2 1237 aa23.89■■□□□ 1.41
VCPKMT-203ENST00000484763 PPP2R5BQ15173 497 aa23.88■■□□□ 1.41
VCPKMT-203ENST00000484763 EAPPQ56P03 285 aaPredicted RBP23.88■■□□□ 1.41
VCPKMT-203ENST00000484763 FANCBQ8NB91 859 aa23.88■■□□□ 1.41
VCPKMT-203ENST00000484763 NSUN7Q8NE18 718 aaKnown RBP23.88■■□□□ 1.41
VCPKMT-203ENST00000484763 KANSL2Q9H9L4 492 aa23.88■■□□□ 1.41
VCPKMT-203ENST00000484763 CIZ1Q9ULV3 898 aaPredicted RBP23.88■■□□□ 1.41
VCPKMT-203ENST00000484763 CCDC196A0A1B0GTZ2 297 aa23.87■■□□□ 1.41
VCPKMT-203ENST00000484763 GH2P01242 217 aa23.87■■□□□ 1.41
VCPKMT-203ENST00000484763 GJB2P29033 226 aa23.87■■□□□ 1.41
VCPKMT-203ENST00000484763 SHROOM1Q2M3G4 852 aaPredicted RBP23.87■■□□□ 1.41
VCPKMT-203ENST00000484763 CTDNEP1O95476 244 aa23.87■■□□□ 1.41
VCPKMT-203ENST00000484763 CDC27P30260 824 aa23.87■■□□□ 1.41
VCPKMT-203ENST00000484763 CPLX2Q6PUV4 134 aaKnown RBP23.87■■□□□ 1.41
VCPKMT-203ENST00000484763 CLEC10AQ8IUN9 316 aa23.87■■□□□ 1.41
VCPKMT-203ENST00000484763 SMARCC2Q8TAQ2 1214 aa23.87■■□□□ 1.41
VCPKMT-203ENST00000484763 PTPDC1A2A3K4 754 aa23.86■■□□□ 1.41
VCPKMT-203ENST00000484763 CDKL5O76039 1030 aa23.86■■□□□ 1.41
VCPKMT-203ENST00000484763 GUCY1A2P33402 732 aa23.86■■□□□ 1.41
VCPKMT-203ENST00000484763 ADD1P35611 737 aaKnown RBP23.86■■□□□ 1.41
VCPKMT-203ENST00000484763 ICA1Q05084 483 aa23.86■■□□□ 1.41
VCPKMT-203ENST00000484763 SEPT2Q15019 361 aa23.86■■□□□ 1.41
VCPKMT-203ENST00000484763 SUPT20HL1Q3ZLR7 823 aa23.86■■□□□ 1.41
VCPKMT-203ENST00000484763 KRT26Q7Z3Y9 468 aa23.86■■□□□ 1.41
VCPKMT-203ENST00000484763 MAP3K14Q99558 947 aa23.86■■□□□ 1.41
VCPKMT-203ENST00000484763 FAM217BQ9NTX9 383 aaPredicted RBP23.86■■□□□ 1.41
VCPKMT-203ENST00000484763 RBM28Q9NW13 759 aaKnown RBP23.86■■□□□ 1.41
VCPKMT-203ENST00000484763 CLIP2Q9UDT6 1046 aa23.86■■□□□ 1.41
VCPKMT-203ENST00000484763 SSC5DA1L4H1 1573 aa23.86■■□□□ 1.41
VCPKMT-203ENST00000484763 PHF20L1A8MW92 1017 aa23.85■■□□□ 1.41
VCPKMT-203ENST00000484763 JAK2O60674 1132 aa23.85■■□□□ 1.41
VCPKMT-203ENST00000484763 CAP2P40123 477 aa23.85■■□□□ 1.41
VCPKMT-203ENST00000484763 JAG1P78504 1218 aa23.85■■□□□ 1.41
VCPKMT-203ENST00000484763 HMGN5P82970 282 aaKnown RBP23.85■■□□□ 1.41
VCPKMT-203ENST00000484763 RAB3GAP1Q15042 981 aa23.85■■□□□ 1.41
VCPKMT-203ENST00000484763 PRAMEF18Q5VWM3 479 aa23.85■■□□□ 1.41
VCPKMT-203ENST00000484763 CTCFLQ8NI51 663 aaPredicted RBP23.85■■□□□ 1.41
VCPKMT-203ENST00000484763 ZNF341Q9BYN7 854 aa23.85■■□□□ 1.41
VCPKMT-203ENST00000484763 CHMP5Q9NZZ3 219 aa23.85■■□□□ 1.41
VCPKMT-203ENST00000484763 NYAP2Q9P242 653 aa23.85■■□□□ 1.41
VCPKMT-203ENST00000484763 ZBTB21Q9ULJ3 1066 aa23.85■■□□□ 1.41
VCPKMT-203ENST00000484763 ADM5C9JUS6 153 aa23.84■■□□□ 1.41
VCPKMT-203ENST00000484763 DOCK1Q14185 1865 aa23.83■■□□□ 1.41
VCPKMT-203ENST00000484763 DTNBO60941 627 aa23.83■■□□□ 1.41
VCPKMT-203ENST00000484763 EEF2P13639 858 aaKnown RBP23.83■■□□□ 1.41
VCPKMT-203ENST00000484763 KIF5BP33176 963 aa23.83■■□□□ 1.41
VCPKMT-203ENST00000484763 ATP2B2Q01814 1243 aa23.83■■□□□ 1.41
VCPKMT-203ENST00000484763 LRRC47Q8N1G4 583 aaKnown RBP23.83■■□□□ 1.41
VCPKMT-203ENST00000484763 ASNSP08243 561 aa23.82■■□□□ 1.4
VCPKMT-203ENST00000484763 VEGFAP15692 232 aaPredicted RBP23.82■■□□□ 1.4
VCPKMT-203ENST00000484763 GRM4Q14833 912 aa23.82■■□□□ 1.4
VCPKMT-203ENST00000484763 NTRK3Q16288 839 aa23.82■■□□□ 1.4
VCPKMT-203ENST00000484763 GINM1Q9NU53 330 aa23.82■■□□□ 1.4
VCPKMT-203ENST00000484763 CTNND1O60716 968 aaKnown RBP23.82■■□□□ 1.4
VCPKMT-203ENST00000484763 IFNAR1P17181 557 aa23.82■■□□□ 1.4
VCPKMT-203ENST00000484763 MKL1Q969V6 931 aa23.82■■□□□ 1.4
VCPKMT-203ENST00000484763 DDX11Q96FC9 970 aa23.82■■□□□ 1.4
VCPKMT-203ENST00000484763 KIF3AQ9Y496 699 aa23.82■■□□□ 1.4
VCPKMT-203ENST00000484763 FAM184AQ8NB25 1140 aa23.81■■□□□ 1.4
VCPKMT-203ENST00000484763 RRAGCQ9HB90 399 aa23.81■■□□□ 1.4
VCPKMT-203ENST00000484763 ZNF112Q9UJU3 913 aa23.81■■□□□ 1.4
VCPKMT-203ENST00000484763 TMTC3Q6ZXV5 915 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms