RNA–Protein interactions for RNA: ENST00000484752.5

RFTN1-210, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-210ENST00000484752 CAP2P40123 477 aa13.55□□□□□ -0.24
RFTN1-210ENST00000484752 METAP2P50579 478 aaKnown RBP eCLIP13.55□□□□□ -0.24
RFTN1-210ENST00000484752 EVCP57679 992 aa13.55□□□□□ -0.24
RFTN1-210ENST00000484752 APOBRQ0VD83 1088 aa13.55□□□□□ -0.24
RFTN1-210ENST00000484752 TTLL12Q14166 644 aaPredicted RBP13.55□□□□□ -0.24
RFTN1-210ENST00000484752 RAB3GAP1Q15042 981 aa13.55□□□□□ -0.24
RFTN1-210ENST00000484752 ANKS1AQ92625 1134 aa13.55□□□□□ -0.24
RFTN1-210ENST00000484752 CDCA5Q96FF9 252 aa13.55□□□□□ -0.24
RFTN1-210ENST00000484752 CEP95Q96GE4 821 aa13.55□□□□□ -0.24
RFTN1-210ENST00000484752 TMX3Q96JJ7 454 aa13.55□□□□□ -0.24
RFTN1-210ENST00000484752 WRNIP1Q96S55 665 aa13.55□□□□□ -0.24
RFTN1-210ENST00000484752 ARHGEF10LQ9HCE6 1279 aa13.55□□□□□ -0.24
RFTN1-210ENST00000484752 NMRK2Q9NPI5 230 aa13.55□□□□□ -0.24
RFTN1-210ENST00000484752 MTMR4Q9NYA4 1195 aa13.55□□□□□ -0.24
RFTN1-210ENST00000484752 SYNPO2Q9UMS6 1093 aa13.55□□□□□ -0.24
RFTN1-210ENST00000484752 CPLX1O14810 134 aa13.54□□□□□ -0.24
RFTN1-210ENST00000484752 CDKL5O76039 1030 aa13.54□□□□□ -0.24
RFTN1-210ENST00000484752 CD2BP2O95400 341 aaKnown RBP13.54□□□□□ -0.24
RFTN1-210ENST00000484752 GH2P01242 217 aa13.54□□□□□ -0.24
RFTN1-210ENST00000484752 KIF5BP33176 963 aa13.54□□□□□ -0.24
RFTN1-210ENST00000484752 ATP2B2Q01814 1243 aa13.54□□□□□ -0.24
RFTN1-210ENST00000484752 SEC23AQ15436 765 aa13.54□□□□□ -0.24
RFTN1-210ENST00000484752 APOA5Q6Q788 366 aa13.54□□□□□ -0.24
RFTN1-210ENST00000484752 ARMC9Q7Z3E5 817 aa13.54□□□□□ -0.24
RFTN1-210ENST00000484752 MICU3Q86XE3 530 aa13.54□□□□□ -0.24
RFTN1-210ENST00000484752 CDAN1Q8IWY9 1227 aa13.54□□□□□ -0.24
RFTN1-210ENST00000484752 CTCFLQ8NI51 663 aaPredicted RBP13.54□□□□□ -0.24
RFTN1-210ENST00000484752 GLIS2Q9BZE0 524 aaPredicted RBP13.54□□□□□ -0.24
RFTN1-210ENST00000484752 AS3MTQ9HBK9 375 aa13.54□□□□□ -0.24
RFTN1-210ENST00000484752 NYAP2Q9P242 653 aa13.54□□□□□ -0.24
RFTN1-210ENST00000484752 ZBTB21Q9ULJ3 1066 aa13.54□□□□□ -0.24
RFTN1-210ENST00000484752 TPCN1Q9ULQ1 816 aa13.54□□□□□ -0.24
RFTN1-210ENST00000484752 KIF3AQ9Y496 699 aa13.54□□□□□ -0.24
RFTN1-210ENST00000484752 CSADQ9Y600 493 aa13.54□□□□□ -0.24
RFTN1-210ENST00000484752 MYH8P13535 1937 aa13.54□□□□□ -0.24
RFTN1-210ENST00000484752 IGKV6D-41A0A0C4DH26 115 aa13.53□□□□□ -0.24
RFTN1-210ENST00000484752 GOLGA8AA7E2F4 631 aa13.53□□□□□ -0.24
RFTN1-210ENST00000484752 NMT2O60551 498 aa13.53□□□□□ -0.24
RFTN1-210ENST00000484752 PFKFB2O60825 505 aa13.53□□□□□ -0.24
RFTN1-210ENST00000484752 CHADLQ6NUI6 762 aa13.53□□□□□ -0.24
RFTN1-210ENST00000484752 SCYL3Q8IZE3 742 aa13.53□□□□□ -0.24
RFTN1-210ENST00000484752 ZNF654Q8IZM8 581 aa13.53□□□□□ -0.24
RFTN1-210ENST00000484752 PNMA1Q8ND90 353 aa13.53□□□□□ -0.24
RFTN1-210ENST00000484752 NUP133Q8WUM0 1156 aa13.53□□□□□ -0.24
RFTN1-210ENST00000484752 INTS4Q96HW7 963 aaKnown RBP13.53□□□□□ -0.24
RFTN1-210ENST00000484752 IL17RBQ9NRM6 502 aa13.53□□□□□ -0.24
RFTN1-210ENST00000484752 RBM28Q9NW13 759 aaKnown RBP13.53□□□□□ -0.24
RFTN1-210ENST00000484752 SIPA1L1O43166 1804 aa13.53□□□□□ -0.24
RFTN1-210ENST00000484752 PHF20L1A8MW92 1017 aa13.52□□□□□ -0.25
RFTN1-210ENST00000484752 PDIA3P30101 505 aaKnown RBP13.52□□□□□ -0.25
RFTN1-210ENST00000484752 GNAQP50148 359 aa13.52□□□□□ -0.25
RFTN1-210ENST00000484752 FKBP1BP68106 108 aa13.52□□□□□ -0.25
RFTN1-210ENST00000484752 STK3Q13188 491 aa13.52□□□□□ -0.25
RFTN1-210ENST00000484752 SEPT2Q15019 361 aa13.52□□□□□ -0.25
RFTN1-210ENST00000484752 ME3Q16798 604 aa13.52□□□□□ -0.25
RFTN1-210ENST00000484752 PRAMEF18Q5VWM3 479 aa13.52□□□□□ -0.25
RFTN1-210ENST00000484752 MAP1SQ66K74 1059 aaPredicted RBP13.52□□□□□ -0.25
RFTN1-210ENST00000484752 ZNF784Q8NCA9 323 aaPredicted RBP13.52□□□□□ -0.25
RFTN1-210ENST00000484752 GTF3C6Q969F1 213 aa13.52□□□□□ -0.25
RFTN1-210ENST00000484752 MAP3K14Q99558 947 aa13.52□□□□□ -0.25
RFTN1-210ENST00000484752 GOPCQ9HD26 462 aa13.52□□□□□ -0.25
RFTN1-210ENST00000484752 GPHNQ9NQX3 736 aaPredicted RBP13.52□□□□□ -0.25
RFTN1-210ENST00000484752 CLIP2Q9UDT6 1046 aa13.52□□□□□ -0.25
RFTN1-210ENST00000484752 ZNF112Q9UJU3 913 aa13.52□□□□□ -0.25
RFTN1-210ENST00000484752 NID2Q14112 1375 aa13.51□□□□□ -0.25
RFTN1-210ENST00000484752 UNCXA6NJT0 531 aa13.51□□□□□ -0.25
RFTN1-210ENST00000484752 USP17L5A8MUK1 530 aa13.51□□□□□ -0.25
RFTN1-210ENST00000484752 NOVP48745 357 aa13.51□□□□□ -0.25
RFTN1-210ENST00000484752 MAP3K9P80192 1104 aa13.51□□□□□ -0.25
RFTN1-210ENST00000484752 COL9A3Q14050 684 aaPredicted RBP13.51□□□□□ -0.25
RFTN1-210ENST00000484752 RTN1Q16799 776 aa13.51□□□□□ -0.25
RFTN1-210ENST00000484752 NOL9Q5SY16 702 aaKnown RBP13.51□□□□□ -0.25
RFTN1-210ENST00000484752 CCDC83Q8IWF9 413 aa13.51□□□□□ -0.25
RFTN1-210ENST00000484752 ANKRD13AQ8IZ07 590 aa13.51□□□□□ -0.25
RFTN1-210ENST00000484752 KLRG1Q96E93 195 aa13.51□□□□□ -0.25
RFTN1-210ENST00000484752 FEZ1Q99689 392 aa13.51□□□□□ -0.25
RFTN1-210ENST00000484752 TMEM47Q9BQJ4 181 aa13.51□□□□□ -0.25
RFTN1-210ENST00000484752 LARP6Q9BRS8 491 aaKnown RBP13.51□□□□□ -0.25
RFTN1-210ENST00000484752 LLPHQ9BRT6 129 aaKnown RBP13.51□□□□□ -0.25
RFTN1-210ENST00000484752 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.51□□□□□ -0.25
RFTN1-210ENST00000484752 BRPF3Q9ULD4 1205 aa13.51□□□□□ -0.25
RFTN1-210ENST00000484752 RAD21O60216 631 aa13.5□□□□□ -0.25
RFTN1-210ENST00000484752 EEF2P13639 858 aaKnown RBP13.5□□□□□ -0.25
RFTN1-210ENST00000484752 USP14P54578 494 aa13.5□□□□□ -0.25
RFTN1-210ENST00000484752 HMGN5P82970 282 aaKnown RBP13.5□□□□□ -0.25
RFTN1-210ENST00000484752 CUL4AQ13619 759 aa13.5□□□□□ -0.25
RFTN1-210ENST00000484752 PRKG1Q13976 671 aa13.5□□□□□ -0.25
RFTN1-210ENST00000484752 RCSD1Q6JBY9 416 aa13.5□□□□□ -0.25
RFTN1-210ENST00000484752 FANCBQ8NB91 859 aa13.5□□□□□ -0.25
RFTN1-210ENST00000484752 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.5□□□□□ -0.25
RFTN1-210ENST00000484752 NKX2-3Q8TAU0 364 aa13.5□□□□□ -0.25
RFTN1-210ENST00000484752 MKL1Q969V6 931 aa13.5□□□□□ -0.25
RFTN1-210ENST00000484752 LZTS2Q9BRK4 669 aa13.5□□□□□ -0.25
RFTN1-210ENST00000484752 ZNF408Q9H9D4 720 aa13.5□□□□□ -0.25
RFTN1-210ENST00000484752 CWC22Q9HCG8 908 aaKnown RBP13.5□□□□□ -0.25
RFTN1-210ENST00000484752 SMC3Q9UQE7 1217 aa13.5□□□□□ -0.25
RFTN1-210ENST00000484752 SSC5DA1L4H1 1573 aa13.49□□□□□ -0.25
RFTN1-210ENST00000484752 USP2O75604 605 aaPredicted RBP13.49□□□□□ -0.25
RFTN1-210ENST00000484752 PARP1P09874 1014 aaKnown RBP13.49□□□□□ -0.25
RFTN1-210ENST00000484752 POTEIP0CG38 1075 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms