RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 CYP2D6P10635 497 aa8.25□□□□□ -1.09
BRCA1-216ENST00000484087 TM4SF4P48230 202 aa8.25□□□□□ -1.09
BRCA1-216ENST00000484087 CRHR2Q13324 411 aa8.25□□□□□ -1.09
BRCA1-216ENST00000484087 DCAF15Q66K64 600 aa8.25□□□□□ -1.09
BRCA1-216ENST00000484087 ZNF296Q8WUU4 475 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-216ENST00000484087 KIF2CQ99661 725 aa8.25□□□□□ -1.09
BRCA1-216ENST00000484087 RIOK1Q9BRS2 568 aaKnown RBP8.25□□□□□ -1.09
BRCA1-216ENST00000484087 NOL10Q9BSC4 688 aaKnown RBP8.25□□□□□ -1.09
BRCA1-216ENST00000484087 CYP2D7A0A087X1C5 515 aa8.24□□□□□ -1.09
BRCA1-216ENST00000484087 MANSC4A6NHS7 340 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-216ENST00000484087 MBD4O95243 580 aa8.24□□□□□ -1.09
BRCA1-216ENST00000484087 USP5P45974 858 aa8.24□□□□□ -1.09
BRCA1-216ENST00000484087 SREBF2Q12772 1141 aa8.24□□□□□ -1.09
BRCA1-216ENST00000484087 MAP3K12Q12852 859 aa8.24□□□□□ -1.09
BRCA1-216ENST00000484087 ERO1BQ86YB8 467 aa8.24□□□□□ -1.09
BRCA1-216ENST00000484087 KCNV2Q8TDN2 545 aa8.24□□□□□ -1.09
BRCA1-216ENST00000484087 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.24□□□□□ -1.09
BRCA1-216ENST00000484087 HAUS7Q99871 368 aa8.24□□□□□ -1.09
BRCA1-216ENST00000484087 MCOLN1Q9GZU1 580 aa8.24□□□□□ -1.09
BRCA1-216ENST00000484087 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.24□□□□□ -1.09
BRCA1-216ENST00000484087 CHMP5Q9NZZ3 219 aa8.24□□□□□ -1.09
BRCA1-216ENST00000484087 ZNF112Q9UJU3 913 aa8.24□□□□□ -1.09
BRCA1-216ENST00000484087 COL2A1P02458 1487 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-216ENST00000484087 MKI67P46013 3256 aaKnown RBP8.23□□□□□ -1.09
BRCA1-216ENST00000484087 MAGEB6P1A0A0J9YX57 407 aa8.23□□□□□ -1.09
BRCA1-216ENST00000484087 TRIM75PA6NK02 468 aa8.23□□□□□ -1.09
BRCA1-216ENST00000484087 BTBD19C9JJ37 291 aa8.23□□□□□ -1.09
BRCA1-216ENST00000484087 GPR25O00155 361 aa8.23□□□□□ -1.09
BRCA1-216ENST00000484087 CA12O43570 354 aa8.23□□□□□ -1.09
BRCA1-216ENST00000484087 BAG3O95817 575 aa8.23□□□□□ -1.09
BRCA1-216ENST00000484087 PTPRAP18433 802 aa8.23□□□□□ -1.09
BRCA1-216ENST00000484087 HSPA4P34932 840 aa8.23□□□□□ -1.09
BRCA1-216ENST00000484087 ADD2P35612 726 aa8.23□□□□□ -1.09
BRCA1-216ENST00000484087 PPP4CP60510 307 aa8.23□□□□□ -1.09
BRCA1-216ENST00000484087 MOGSQ13724 837 aa8.23□□□□□ -1.09
BRCA1-216ENST00000484087 IFFO2Q5TF58 517 aa8.23□□□□□ -1.09
BRCA1-216ENST00000484087 RNF20Q5VTR2 975 aa8.23□□□□□ -1.09
BRCA1-216ENST00000484087 SCYL3Q8IZE3 742 aa8.23□□□□□ -1.09
BRCA1-216ENST00000484087 STK11IPQ8N1F8 1099 aa8.23□□□□□ -1.09
BRCA1-216ENST00000484087 SLC44A5Q8NCS7 719 aa8.23□□□□□ -1.09
BRCA1-216ENST00000484087 SEC62Q99442 399 aaKnown RBP8.23□□□□□ -1.09
BRCA1-216ENST00000484087 PUS7LQ9H0K6 701 aaKnown RBP8.23□□□□□ -1.09
BRCA1-216ENST00000484087 SAGE1Q9NXZ1 904 aa8.23□□□□□ -1.09
BRCA1-216ENST00000484087 MGAMO43451 1857 aa8.22□□□□□ -1.09
BRCA1-216ENST00000484087 M0R2C6 588 aa8.22□□□□□ -1.09
BRCA1-216ENST00000484087 PEX10O60683 326 aa8.22□□□□□ -1.09
BRCA1-216ENST00000484087 ZKSCAN1P17029 563 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-216ENST00000484087 PLCD1P51178 756 aa8.22□□□□□ -1.09
BRCA1-216ENST00000484087 NEK4P51957 841 aa8.22□□□□□ -1.09
BRCA1-216ENST00000484087 PPIL2Q13356 520 aa8.22□□□□□ -1.09
BRCA1-216ENST00000484087 TAF1CQ15572 869 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-216ENST00000484087 NOL9Q5SY16 702 aaKnown RBP8.22□□□□□ -1.09
BRCA1-216ENST00000484087 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.22□□□□□ -1.09
BRCA1-216ENST00000484087 CLEC10AQ8IUN9 316 aa8.22□□□□□ -1.09
BRCA1-216ENST00000484087 ZNF710Q8N1W2 664 aa8.22□□□□□ -1.09
BRCA1-216ENST00000484087 CD99L2Q8TCZ2 262 aa8.22□□□□□ -1.09
BRCA1-216ENST00000484087 DYNLL2Q96FJ2 89 aa8.22□□□□□ -1.09
BRCA1-216ENST00000484087 ARHGAP39Q9C0H5 1083 aa8.22□□□□□ -1.09
BRCA1-216ENST00000484087 LSG1Q9H089 658 aaKnown RBP8.22□□□□□ -1.09
BRCA1-216ENST00000484087 ZHX2Q9Y6X8 837 aa8.22□□□□□ -1.09
BRCA1-216ENST00000484087 TESPA1A2RU30 521 aaPredicted RBP8.21□□□□□ -1.09
BRCA1-216ENST00000484087 CYP2C8P10632 490 aa8.21□□□□□ -1.09
BRCA1-216ENST00000484087 GTF2A2P52657 109 aa8.21□□□□□ -1.09
BRCA1-216ENST00000484087 PPATQ06203 517 aa8.21□□□□□ -1.09
BRCA1-216ENST00000484087 NMIQ13287 307 aaPredicted RBP8.21□□□□□ -1.09
BRCA1-216ENST00000484087 TTF1Q15361 905 aaPredicted RBP8.21□□□□□ -1.09
BRCA1-216ENST00000484087 ZYXQ15942 572 aaKnown RBP8.21□□□□□ -1.09
BRCA1-216ENST00000484087 TREML2Q5T2D2 321 aa8.21□□□□□ -1.09
BRCA1-216ENST00000484087 GADL1Q6ZQY3 521 aa8.21□□□□□ -1.09
BRCA1-216ENST00000484087 CCDC129Q6ZRS4 1044 aa8.21□□□□□ -1.09
BRCA1-216ENST00000484087 CRACR2BQ8N4Y2 399 aaPredicted RBP8.21□□□□□ -1.09
BRCA1-216ENST00000484087 KBTBD3Q8NAB2 608 aa8.21□□□□□ -1.09
BRCA1-216ENST00000484087 HOOK2Q96ED9 719 aa8.21□□□□□ -1.09
BRCA1-216ENST00000484087 ABHD8Q96I13 439 aa8.21□□□□□ -1.09
BRCA1-216ENST00000484087 CPA4Q9UI42 421 aa8.21□□□□□ -1.09
BRCA1-216ENST00000484087 CCDC171Q6TFL3 1326 aa8.21□□□□□ -1.1
BRCA1-216ENST00000484087 CTGFP29279 349 aa8.2□□□□□ -1.1
BRCA1-216ENST00000484087 CAP2P40123 477 aa8.2□□□□□ -1.1
BRCA1-216ENST00000484087 MAP3K10Q02779 954 aa8.2□□□□□ -1.1
BRCA1-216ENST00000484087 SNAPC2Q13487 334 aa8.2□□□□□ -1.1
BRCA1-216ENST00000484087 NFKBIBQ15653 356 aa8.2□□□□□ -1.1
BRCA1-216ENST00000484087 GPAT2Q6NUI2 795 aa8.2□□□□□ -1.1
BRCA1-216ENST00000484087 EFCAB3Q8N7B9 438 aa8.2□□□□□ -1.1
BRCA1-216ENST00000484087 OSBP2Q969R2 916 aa8.2□□□□□ -1.1
BRCA1-216ENST00000484087 IL17RAQ96F46 866 aa8.2□□□□□ -1.1
BRCA1-216ENST00000484087 CWC22Q9HCG8 908 aaKnown RBP8.2□□□□□ -1.1
BRCA1-216ENST00000484087 DCP1AQ9NPI6 582 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-216ENST00000484087 PICK1Q9NRD5 415 aa8.2□□□□□ -1.1
BRCA1-216ENST00000484087 MCM9Q9NXL9 1143 aa8.2□□□□□ -1.1
BRCA1-216ENST00000484087 KCNH4Q9UQ05 1017 aa8.2□□□□□ -1.1
BRCA1-216ENST00000484087 AFG3L2Q9Y4W6 797 aa8.2□□□□□ -1.1
BRCA1-216ENST00000484087 TNRC18O15417 2968 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-216ENST00000484087 UNCXA6NJT0 531 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 CCDC85CA6NKD9 419 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 PDHXO00330 501 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 CTNND1O60716 968 aaKnown RBP8.19□□□□□ -1.1
BRCA1-216ENST00000484087 GH2P01242 217 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 HLA-DOAP06340 250 aa8.19□□□□□ -1.1
BRCA1-216ENST00000484087 ZFYP08048 801 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-216ENST00000484087 CETPP11597 493 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms