RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 IFIT3O14879 490 aaKnown RBP16.63■□□□□ 0.25
SRSF6-202ENST00000483871 HMGB1P09429 215 aaKnown RBP16.63■□□□□ 0.25
SRSF6-202ENST00000483871 ATP2B2Q01814 1243 aa16.63■□□□□ 0.25
SRSF6-202ENST00000483871 RCSD1Q6JBY9 416 aa16.63■□□□□ 0.25
SRSF6-202ENST00000483871 SAPCD2Q86UD0 394 aa16.63■□□□□ 0.25
SRSF6-202ENST00000483871 PICK1Q9NRD5 415 aa16.63■□□□□ 0.25
SRSF6-202ENST00000483871 TCP11L1Q9NUJ3 509 aa16.63■□□□□ 0.25
SRSF6-202ENST00000483871 MTMR4Q9NYA4 1195 aa16.63■□□□□ 0.25
SRSF6-202ENST00000483871 STX8Q9UNK0 236 aa16.63■□□□□ 0.25
SRSF6-202ENST00000483871 ZHX2Q9Y6X8 837 aa16.63■□□□□ 0.25
SRSF6-202ENST00000483871 TNKSO95271 1327 aa16.63■□□□□ 0.25
SRSF6-202ENST00000483871 EEF2P13639 858 aaKnown RBP16.62■□□□□ 0.25
SRSF6-202ENST00000483871 NEK4P51957 841 aa16.62■□□□□ 0.25
SRSF6-202ENST00000483871 ENAHQ8N8S7 591 aaPredicted RBP16.62■□□□□ 0.25
SRSF6-202ENST00000483871 ACER1Q8TDN7 264 aa16.62■□□□□ 0.25
SRSF6-202ENST00000483871 SLC10A4Q96EP9 437 aa16.62■□□□□ 0.25
SRSF6-202ENST00000483871 LARP6Q9BRS8 491 aaKnown RBP16.62■□□□□ 0.25
SRSF6-202ENST00000483871 UBAC1Q9BSL1 405 aa16.62■□□□□ 0.25
SRSF6-202ENST00000483871 KANSL2Q9H9L4 492 aa16.62■□□□□ 0.25
SRSF6-202ENST00000483871 CLIP2Q9UDT6 1046 aa16.62■□□□□ 0.25
SRSF6-202ENST00000483871 PLIN4Q96Q06 1357 aa16.62■□□□□ 0.25
SRSF6-202ENST00000483871 GREB1LQ9C091 1923 aaPredicted RBP16.62■□□□□ 0.25
SRSF6-202ENST00000483871 A0A1W2PRG0 241 aa16.62■□□□□ 0.25
SRSF6-202ENST00000483871 USP17L5A8MUK1 530 aa16.62■□□□□ 0.25
SRSF6-202ENST00000483871 ECE1P42892 770 aa16.62■□□□□ 0.25
SRSF6-202ENST00000483871 ICA1Q05084 483 aa16.62■□□□□ 0.25
SRSF6-202ENST00000483871 SEC23AQ15436 765 aa16.62■□□□□ 0.25
SRSF6-202ENST00000483871 Q6ZUG5 572 aa16.62■□□□□ 0.25
SRSF6-202ENST00000483871 PDRG1Q9NUG6 133 aa16.62■□□□□ 0.25
SRSF6-202ENST00000483871 DOCK1Q14185 1865 aa16.62■□□□□ 0.25
SRSF6-202ENST00000483871 TMEM67Q5HYA8 995 aa16.61■□□□□ 0.25
SRSF6-202ENST00000483871 CHMP4CQ96CF2 233 aa16.61■□□□□ 0.25
SRSF6-202ENST00000483871 OTUD5Q96G74 571 aa16.61■□□□□ 0.25
SRSF6-202ENST00000483871 GINM1Q9NU53 330 aa16.61■□□□□ 0.25
SRSF6-202ENST00000483871 ABT1Q9ULW3 272 aaKnown RBP16.61■□□□□ 0.25
SRSF6-202ENST00000483871 TLL2Q9Y6L7 1015 aa16.61■□□□□ 0.25
SRSF6-202ENST00000483871 ERICH2A1L162 156 aa16.6■□□□□ 0.25
SRSF6-202ENST00000483871 SH2B2O14492 632 aaPredicted RBP16.6■□□□□ 0.25
SRSF6-202ENST00000483871 TTLL1O95922 423 aa16.6■□□□□ 0.25
SRSF6-202ENST00000483871 GJA5P36382 358 aa16.6■□□□□ 0.25
SRSF6-202ENST00000483871 NOVP48745 357 aa16.6■□□□□ 0.25
SRSF6-202ENST00000483871 NT5C2P49902 561 aa16.6■□□□□ 0.25
SRSF6-202ENST00000483871 APLP1P51693 650 aa16.6■□□□□ 0.25
SRSF6-202ENST00000483871 MKRN3Q13064 507 aaKnown RBP16.6■□□□□ 0.25
SRSF6-202ENST00000483871 SPP2Q13103 211 aa16.6■□□□□ 0.25
SRSF6-202ENST00000483871 DGKZQ13574 1117 aa16.6■□□□□ 0.25
SRSF6-202ENST00000483871 OPTNQ96CV9 577 aa16.6■□□□□ 0.25
SRSF6-202ENST00000483871 TMEM87BQ96K49 555 aa16.6■□□□□ 0.25
SRSF6-202ENST00000483871 TTC14Q96N46 770 aa16.6■□□□□ 0.25
SRSF6-202ENST00000483871 TMEM47Q9BQJ4 181 aa16.6■□□□□ 0.25
SRSF6-202ENST00000483871 LY9Q9HBG7 655 aa16.6■□□□□ 0.25
SRSF6-202ENST00000483871 NYAP2Q9P242 653 aa16.6■□□□□ 0.25
SRSF6-202ENST00000483871 TRIM75PA6NK02 468 aa16.59■□□□□ 0.25
SRSF6-202ENST00000483871 IRF6O14896 467 aa16.59■□□□□ 0.25
SRSF6-202ENST00000483871 HTRA3P83110 453 aa16.59■□□□□ 0.25
SRSF6-202ENST00000483871 TOB2Q14106 344 aaPredicted RBP16.59■□□□□ 0.25
SRSF6-202ENST00000483871 WTAPQ15007 396 aa16.59■□□□□ 0.25
SRSF6-202ENST00000483871 SART3Q15020 963 aaKnown RBP16.59■□□□□ 0.25
SRSF6-202ENST00000483871 ZYXQ15942 572 aaKnown RBP16.59■□□□□ 0.25
SRSF6-202ENST00000483871 IFIT1BQ5T764 474 aaKnown RBP16.59■□□□□ 0.25
SRSF6-202ENST00000483871 DGKHQ86XP1 1220 aa16.59■□□□□ 0.25
SRSF6-202ENST00000483871 ERO1BQ86YB8 467 aa16.59■□□□□ 0.25
SRSF6-202ENST00000483871 LRRC47Q8N1G4 583 aaKnown RBP16.59■□□□□ 0.25
SRSF6-202ENST00000483871 MTMR7Q9Y216 660 aa16.59■□□□□ 0.25
SRSF6-202ENST00000483871 AFG3L2Q9Y4W6 797 aa16.59■□□□□ 0.25
SRSF6-202ENST00000483871 SPDYE5A6NIY4 337 aa16.59■□□□□ 0.25
SRSF6-202ENST00000483871 UNCXA6NJT0 531 aa16.59■□□□□ 0.25
SRSF6-202ENST00000483871 ZNF157P51786 506 aaPredicted RBP16.59■□□□□ 0.25
SRSF6-202ENST00000483871 FGD1P98174 961 aa16.59■□□□□ 0.25
SRSF6-202ENST00000483871 RABEP1Q15276 862 aa16.59■□□□□ 0.25
SRSF6-202ENST00000483871 ZNF280CQ8ND82 737 aa16.59■□□□□ 0.25
SRSF6-202ENST00000483871 BRF1Q92994 677 aa16.59■□□□□ 0.25
SRSF6-202ENST00000483871 WDR19Q8NEZ3 1342 aa16.58■□□□□ 0.25
SRSF6-202ENST00000483871 PHIPQ8WWQ0 1821 aa16.58■□□□□ 0.24
SRSF6-202ENST00000483871 AK2P54819 239 aa16.58■□□□□ 0.24
SRSF6-202ENST00000483871 PPATQ06203 517 aa16.58■□□□□ 0.24
SRSF6-202ENST00000483871 KIAA1755Q5JYT7 1200 aa16.58■□□□□ 0.24
SRSF6-202ENST00000483871 NOL8Q76FK4 1167 aaKnown RBP16.58■□□□□ 0.24
SRSF6-202ENST00000483871 RASGRP2Q7LDG7 609 aa16.58■□□□□ 0.24
SRSF6-202ENST00000483871 ANKS1AQ92625 1134 aa16.58■□□□□ 0.24
SRSF6-202ENST00000483871 MKL1Q969V6 931 aa16.58■□□□□ 0.24
SRSF6-202ENST00000483871 MTA3Q9BTC8 594 aa16.58■□□□□ 0.24
SRSF6-202ENST00000483871 WDR18Q9BV38 432 aa16.58■□□□□ 0.24
SRSF6-202ENST00000483871 AGXT2Q9BYV1 514 aa16.58■□□□□ 0.24
SRSF6-202ENST00000483871 BRPF3Q9ULD4 1205 aa16.58■□□□□ 0.24
SRSF6-202ENST00000483871 TMX2Q9Y320 296 aa16.58■□□□□ 0.24
SRSF6-202ENST00000483871 MYH4Q9Y623 1939 aa16.58■□□□□ 0.24
SRSF6-202ENST00000483871 USP17L10C9JJH3 530 aa16.57■□□□□ 0.24
SRSF6-202ENST00000483871 RAD21O60216 631 aa16.57■□□□□ 0.24
SRSF6-202ENST00000483871 CD2BP2O95400 341 aaKnown RBP16.57■□□□□ 0.24
SRSF6-202ENST00000483871 TOP1P11387 765 aaKnown RBP16.57■□□□□ 0.24
SRSF6-202ENST00000483871 LIFRP42702 1097 aa16.57■□□□□ 0.24
SRSF6-202ENST00000483871 APOBRQ0VD83 1088 aa16.57■□□□□ 0.24
SRSF6-202ENST00000483871 MTMR2Q13614 643 aa16.57■□□□□ 0.24
SRSF6-202ENST00000483871 CCDC178Q5BJE1 867 aa16.57■□□□□ 0.24
SRSF6-202ENST00000483871 RGMBQ6NW40 437 aa16.57■□□□□ 0.24
SRSF6-202ENST00000483871 RAB11FIP4Q86YS3 637 aa16.57■□□□□ 0.24
SRSF6-202ENST00000483871 AS3MTQ9HBK9 375 aa16.57■□□□□ 0.24
SRSF6-202ENST00000483871 ARHGEF10LQ9HCE6 1279 aa16.57■□□□□ 0.24
SRSF6-202ENST00000483871 BACE1P56817 501 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms