RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 PRPF3O43395 683 aaKnown RBP30.42■■■□□ 2.46
SHOX2-204ENST00000483851 MMP14P50281 582 aa30.42■■■□□ 2.46
SHOX2-204ENST00000483851 FOSBP53539 338 aa30.42■■■□□ 2.46
SHOX2-204ENST00000483851 AKAP17AQ02040 695 aaKnown RBP30.42■■■□□ 2.46
SHOX2-204ENST00000483851 FUT2Q10981 343 aa30.42■■■□□ 2.46
SHOX2-204ENST00000483851 KRT40Q6A162 431 aa30.42■■■□□ 2.46
SHOX2-204ENST00000483851 TMTC3Q6ZXV5 915 aa30.42■■■□□ 2.46
SHOX2-204ENST00000483851 SPATA32Q96LK8 384 aa30.42■■■□□ 2.46
SHOX2-204ENST00000483851 PSMD14O00487 310 aa30.42■■■□□ 2.46
SHOX2-204ENST00000483851 GADD45BO75293 160 aaPredicted RBP30.42■■■□□ 2.46
SHOX2-204ENST00000483851 CFAP100Q494V2 611 aa30.42■■■□□ 2.46
SHOX2-204ENST00000483851 PNMA1Q8ND90 353 aa30.42■■■□□ 2.46
SHOX2-204ENST00000483851 RBM27Q9P2N5 1060 aaKnown RBP30.42■■■□□ 2.46
SHOX2-204ENST00000483851 MYH8P13535 1937 aa30.41■■■□□ 2.46
SHOX2-204ENST00000483851 ENTPD3O75355 529 aa30.41■■■□□ 2.46
SHOX2-204ENST00000483851 KIF23Q02241 960 aaPredicted RBP30.41■■■□□ 2.46
SHOX2-204ENST00000483851 MYH6P13533 1939 aa30.41■■■□□ 2.46
SHOX2-204ENST00000483851 GNAQP50148 359 aa30.4■■■□□ 2.46
SHOX2-204ENST00000483851 NFIAQ12857 509 aa30.4■■■□□ 2.46
SHOX2-204ENST00000483851 OGFOD1Q8N543 542 aa30.4■■■□□ 2.46
SHOX2-204ENST00000483851 LEO1Q8WVC0 666 aaPredicted RBP30.4■■■□□ 2.46
SHOX2-204ENST00000483851 TMEM63CQ9P1W3 806 aa30.4■■■□□ 2.46
SHOX2-204ENST00000483851 FAM43AQ8N2R8 423 aa30.4■■■□□ 2.46
SHOX2-204ENST00000483851 RAD17O75943 681 aa30.39■■■□□ 2.46
SHOX2-204ENST00000483851 XBP1P17861 261 aa30.39■■■□□ 2.46
SHOX2-204ENST00000483851 PPP4R3BQ5MIZ7 849 aa30.39■■■□□ 2.46
SHOX2-204ENST00000483851 OTUD7BQ6GQQ9 843 aa30.39■■■□□ 2.46
SHOX2-204ENST00000483851 JDP2Q8WYK2 163 aa30.39■■■□□ 2.46
SHOX2-204ENST00000483851 TFIP11Q9UBB9 837 aaKnown RBP30.39■■■□□ 2.46
SHOX2-204ENST00000483851 PPP1R1BQ9UD71 204 aaPredicted RBP30.39■■■□□ 2.46
SHOX2-204ENST00000483851 FAM198AQ9UFP1 575 aa30.39■■■□□ 2.46
SHOX2-204ENST00000483851 KLHL34Q8N239 644 aa30.38■■■□□ 2.45
SHOX2-204ENST00000483851 CCDC17Q96LX7 622 aa30.38■■■□□ 2.45
SHOX2-204ENST00000483851 AIFM3Q96NN9 605 aa30.38■■■□□ 2.45
SHOX2-204ENST00000483851 TMEM47Q9BQJ4 181 aa30.38■■■□□ 2.45
SHOX2-204ENST00000483851 PI4KBQ9UBF8 816 aa30.38■■■□□ 2.45
SHOX2-204ENST00000483851 RCOR1Q9UKL0 485 aa30.38■■■□□ 2.45
SHOX2-204ENST00000483851 GRM4Q14833 912 aa30.38■■■□□ 2.45
SHOX2-204ENST00000483851 MTMR14Q8NCE2 650 aa30.38■■■□□ 2.45
SHOX2-204ENST00000483851 ATRNL1Q5VV63 1379 aa30.37■■■□□ 2.45
SHOX2-204ENST00000483851 TOP1P11387 765 aaKnown RBP30.37■■■□□ 2.45
SHOX2-204ENST00000483851 U2AF2P26368 475 aaKnown RBP eCLIP30.37■■■□□ 2.45
SHOX2-204ENST00000483851 FOXP4Q8IVH2 680 aaPredicted RBP30.37■■■□□ 2.45
SHOX2-204ENST00000483851 LZTS2Q9BRK4 669 aa30.37■■■□□ 2.45
SHOX2-204ENST00000483851 STX8Q9UNK0 236 aa30.37■■■□□ 2.45
SHOX2-204ENST00000483851 SAFBQ15424 915 aaKnown RBP eCLIP30.36■■■□□ 2.45
SHOX2-204ENST00000483851 PCDHAC2Q9Y5I4 1007 aa30.36■■■□□ 2.45
SHOX2-204ENST00000483851 ARFGEF1Q9Y6D6 1849 aa30.36■■■□□ 2.45
SHOX2-204ENST00000483851 SPDYE2BA6NHP3 402 aa30.36■■■□□ 2.45
SHOX2-204ENST00000483851 NFKBIEO00221 500 aa30.36■■■□□ 2.45
SHOX2-204ENST00000483851 SPDYE6P0CI01 402 aa30.36■■■□□ 2.45
SHOX2-204ENST00000483851 PRMT6Q96LA8 375 aaPredicted RBP30.36■■■□□ 2.45
SHOX2-204ENST00000483851 RTN4Q9NQC3 1192 aaKnown RBP30.36■■■□□ 2.45
SHOX2-204ENST00000483851 GJB4Q9NTQ9 266 aa30.36■■■□□ 2.45
SHOX2-204ENST00000483851 TMOD2Q9NZR1 351 aa30.36■■■□□ 2.45
SHOX2-204ENST00000483851 IGKV6D-41A0A0C4DH26 115 aa30.35■■■□□ 2.45
SHOX2-204ENST00000483851 PSDA5PKW4 1024 aaPredicted RBP30.35■■■□□ 2.45
SHOX2-204ENST00000483851 PLEKHA8P1O95397 391 aa30.35■■■□□ 2.45
SHOX2-204ENST00000483851 MMP1P03956 469 aa30.35■■■□□ 2.45
SHOX2-204ENST00000483851 GUCY1A2P33402 732 aa30.35■■■□□ 2.45
SHOX2-204ENST00000483851 MYSM1Q5VVJ2 828 aa30.35■■■□□ 2.45
SHOX2-204ENST00000483851 RTEL1Q9NZ71 1219 aa30.35■■■□□ 2.45
SHOX2-204ENST00000483851 CNTNAP5Q8WYK1 1306 aa30.35■■■□□ 2.45
SHOX2-204ENST00000483851 SHMT1P34896 483 aa30.34■■■□□ 2.45
SHOX2-204ENST00000483851 CXCL9Q07325 125 aa30.34■■■□□ 2.45
SHOX2-204ENST00000483851 DLGAP5Q15398 846 aa30.34■■■□□ 2.45
SHOX2-204ENST00000483851 METTL16Q86W50 562 aaKnown RBP30.34■■■□□ 2.45
SHOX2-204ENST00000483851 CMTR1Q8N1G2 835 aaKnown RBP30.34■■■□□ 2.45
SHOX2-204ENST00000483851 CCDC82Q8N4S0 544 aa30.34■■■□□ 2.45
SHOX2-204ENST00000483851 CEP95Q96GE4 821 aa30.34■■■□□ 2.45
SHOX2-204ENST00000483851 TDRD3Q9H7E2 651 aaKnown RBP30.34■■■□□ 2.45
SHOX2-204ENST00000483851 TNIP1Q15025 636 aa30.33■■■□□ 2.45
SHOX2-204ENST00000483851 PKN1Q16512 942 aa30.33■■■□□ 2.45
SHOX2-204ENST00000483851 FKBP1CQ5VVH2 108 aa30.33■■■□□ 2.45
SHOX2-204ENST00000483851 CIAPIN1Q6FI81 312 aa30.33■■■□□ 2.45
SHOX2-204ENST00000483851 SRBD1Q8N5C6 995 aaKnown RBP30.33■■■□□ 2.45
SHOX2-204ENST00000483851 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.33■■■□□ 2.45
SHOX2-204ENST00000483851 POLR3EQ9NVU0 708 aa30.33■■■□□ 2.45
SHOX2-204ENST00000483851 MTMR4Q9NYA4 1195 aa30.33■■■□□ 2.45
SHOX2-204ENST00000483851 BCS1LQ9Y276 419 aa30.33■■■□□ 2.45
SHOX2-204ENST00000483851 GREB1LQ9C091 1923 aaPredicted RBP30.33■■■□□ 2.45
SHOX2-204ENST00000483851 SIPA1L1O43166 1804 aa30.33■■■□□ 2.45
SHOX2-204ENST00000483851 GOLGA6L4A6NEF3 574 aa30.33■■■□□ 2.45
SHOX2-204ENST00000483851 USP28Q96RU2 1077 aa30.33■■■□□ 2.45
SHOX2-204ENST00000483851 FOXP1Q9H334 677 aaPredicted RBP30.33■■■□□ 2.45
SHOX2-204ENST00000483851 V9GY48 417 aaPredicted RBP30.33■■■□□ 2.45
SHOX2-204ENST00000483851 GNL2Q13823 731 aaKnown RBP30.32■■■□□ 2.44
SHOX2-204ENST00000483851 ZFPM1Q8IX07 1006 aa30.32■■■□□ 2.44
SHOX2-204ENST00000483851 KIF28PB7ZC32 967 aa30.31■■■□□ 2.44
SHOX2-204ENST00000483851 YEATS4O95619 227 aa30.31■■■□□ 2.44
SHOX2-204ENST00000483851 SMARCA1P28370 1054 aa30.31■■■□□ 2.44
SHOX2-204ENST00000483851 PALM3A6NDB9 673 aaPredicted RBP30.31■■■□□ 2.44
SHOX2-204ENST00000483851 CACNB3P54284 484 aa30.31■■■□□ 2.44
SHOX2-204ENST00000483851 TCP10Q12799 353 aa30.31■■■□□ 2.44
SHOX2-204ENST00000483851 FAM177A1Q8N128 213 aaPredicted RBP30.31■■■□□ 2.44
SHOX2-204ENST00000483851 MAD2L2Q9UI95 211 aa30.31■■■□□ 2.44
SHOX2-204ENST00000483851 DDTLA6NHG4 134 aaPredicted RBP30.3■■■□□ 2.44
SHOX2-204ENST00000483851 AKR1B1P15121 316 aa30.3■■■□□ 2.44
SHOX2-204ENST00000483851 NASPP49321 788 aaPredicted RBP30.3■■■□□ 2.44
SHOX2-204ENST00000483851 LRSAM1Q6UWE0 723 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms