RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 PAGR1Q9BTK6 254 aa21.86■■□□□ 1.09
ATG4B-221ENST00000483778 CRISPLD2Q9H0B8 497 aa21.86■■□□□ 1.09
ATG4B-221ENST00000483778 RAB11FIP3O75154 756 aa21.85■■□□□ 1.09
ATG4B-221ENST00000483778 CNMDO75829 334 aa21.85■■□□□ 1.09
ATG4B-221ENST00000483778 POLR3DP05423 398 aaPredicted RBP21.85■■□□□ 1.09
ATG4B-221ENST00000483778 FXR1P51114 621 aaKnown RBP eCLIP21.85■■□□□ 1.09
ATG4B-221ENST00000483778 CERS3Q8IU89 383 aa21.85■■□□□ 1.09
ATG4B-221ENST00000483778 SLC44A5Q8NCS7 719 aa21.85■■□□□ 1.09
ATG4B-221ENST00000483778 DIS3LQ8TF46 1054 aaKnown RBP21.85■■□□□ 1.09
ATG4B-221ENST00000483778 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.85■■□□□ 1.099e-8■■■□□ 15.9
ATG4B-221ENST00000483778 ARMT1Q9H993 441 aa21.85■■□□□ 1.09
ATG4B-221ENST00000483778 ERVK-9P63128 1117 aa21.84■■□□□ 1.09
ATG4B-221ENST00000483778 ERVK-24P63145 666 aa21.84■■□□□ 1.09
ATG4B-221ENST00000483778 SEPT2Q15019 361 aa21.84■■□□□ 1.09
ATG4B-221ENST00000483778 USP6NLQ92738 828 aa21.84■■□□□ 1.09
ATG4B-221ENST00000483778 C12orf42Q96LP6 360 aa21.84■■□□□ 1.09
ATG4B-221ENST00000483778 CRNKL1Q9BZJ0 848 aaKnown RBP21.84■■□□□ 1.09
ATG4B-221ENST00000483778 DCP1AQ9NPI6 582 aaPredicted RBP21.84■■□□□ 1.09
ATG4B-221ENST00000483778 MCM9Q9NXL9 1143 aa21.84■■□□□ 1.09
ATG4B-221ENST00000483778 RLFQ13129 1914 aa21.84■■□□□ 1.09
ATG4B-221ENST00000483778 A0A1W2PRG0 241 aa21.83■■□□□ 1.09
ATG4B-221ENST00000483778 HMGCRP04035 888 aa21.83■■□□□ 1.09
ATG4B-221ENST00000483778 ATP5JP18859 108 aa21.83■■□□□ 1.09
ATG4B-221ENST00000483778 TMED8Q6PL24 325 aaPredicted RBP21.83■■□□□ 1.09
ATG4B-221ENST00000483778 DYNLL2Q96FJ2 89 aa21.83■■□□□ 1.09
ATG4B-221ENST00000483778 PAWRQ96IZ0 340 aaKnown RBP21.83■■□□□ 1.09
ATG4B-221ENST00000483778 FEZ1Q99689 392 aa21.83■■□□□ 1.09
ATG4B-221ENST00000483778 KIAA1683Q9H0B3 1180 aa21.83■■□□□ 1.09
ATG4B-221ENST00000483778 PAG1Q9NWQ8 432 aa21.83■■□□□ 1.09
ATG4B-221ENST00000483778 CYP2D7A0A087X1C5 515 aa21.82■■□□□ 1.08
ATG4B-221ENST00000483778 ADD2P35612 726 aa21.82■■□□□ 1.08
ATG4B-221ENST00000483778 MNX1P50219 401 aaPredicted RBP21.82■■□□□ 1.08
ATG4B-221ENST00000483778 CCL14Q16627 93 aa21.82■■□□□ 1.08
ATG4B-221ENST00000483778 KIAA1755Q5JYT7 1200 aa21.82■■□□□ 1.08
ATG4B-221ENST00000483778 CHRDL2Q6WN34 429 aa21.82■■□□□ 1.08
ATG4B-221ENST00000483778 CATSPERGQ6ZRH7 1159 aa21.82■■□□□ 1.08
ATG4B-221ENST00000483778 HAUS7Q99871 368 aa21.82■■□□□ 1.08
ATG4B-221ENST00000483778 RANBP2P49792 3224 aaKnown RBP21.81■■□□□ 1.08
ATG4B-221ENST00000483778 USP17L15C9J2P7 530 aa21.81■■□□□ 1.08
ATG4B-221ENST00000483778 USP17L13C9JLJ4 530 aa21.81■■□□□ 1.08
ATG4B-221ENST00000483778 USP17L11C9JVI0 530 aa21.81■■□□□ 1.08
ATG4B-221ENST00000483778 USP17L18D6R9N7 530 aa21.81■■□□□ 1.08
ATG4B-221ENST00000483778 USP17L22D6RA61 530 aa21.81■■□□□ 1.08
ATG4B-221ENST00000483778 USP17L17D6RBQ6 530 aa21.81■■□□□ 1.08
ATG4B-221ENST00000483778 USP17L19D6RCP7 530 aa21.81■■□□□ 1.08
ATG4B-221ENST00000483778 USP17L20D6RJB6 530 aa21.81■■□□□ 1.08
ATG4B-221ENST00000483778 VCAM1P19320 739 aa21.81■■□□□ 1.08
ATG4B-221ENST00000483778 USP17L24Q0WX57 530 aa21.81■■□□□ 1.08
ATG4B-221ENST00000483778 MORN1Q5T089 497 aa21.81■■□□□ 1.08
ATG4B-221ENST00000483778 SIAH1Q8IUQ4 282 aa21.81■■□□□ 1.08
ATG4B-221ENST00000483778 HTATIP2Q9BUP3 242 aa21.81■■□□□ 1.08
ATG4B-221ENST00000483778 BTBD7Q9P203 1132 aa21.81■■□□□ 1.08
ATG4B-221ENST00000483778 PCDH10Q9P2E7 1040 aa21.81■■□□□ 1.08
ATG4B-221ENST00000483778 RPTORQ8N122 1335 aa21.8■■□□□ 1.08
ATG4B-221ENST00000483778 MBD4O95243 580 aa21.8■■□□□ 1.08
ATG4B-221ENST00000483778 GPR142Q7Z601 462 aa21.8■■□□□ 1.08
ATG4B-221ENST00000483778 CLEC10AQ8IUN9 316 aa21.8■■□□□ 1.08
ATG4B-221ENST00000483778 NUDT12Q9BQG2 462 aa21.8■■□□□ 1.08
ATG4B-221ENST00000483778 HMX1Q9NP08 348 aaPredicted RBP21.8■■□□□ 1.08
ATG4B-221ENST00000483778 CABP5Q9NP86 173 aa21.8■■□□□ 1.08
ATG4B-221ENST00000483778 RBM27Q9P2N5 1060 aaKnown RBP21.8■■□□□ 1.08
ATG4B-221ENST00000483778 ZNFX1Q9P2E3 1918 aaKnown RBP21.79■■□□□ 1.08
ATG4B-221ENST00000483778 MAPK4P31152 587 aa21.79■■□□□ 1.08
ATG4B-221ENST00000483778 PDE3AQ14432 1141 aa21.79■■□□□ 1.08
ATG4B-221ENST00000483778 MAP3K21Q5TCX8 1036 aa21.79■■□□□ 1.08
ATG4B-221ENST00000483778 PLEKHH3Q7Z736 793 aa21.79■■□□□ 1.08
ATG4B-221ENST00000483778 RPAP3Q9H6T3 665 aaPredicted RBP21.79■■□□□ 1.08
ATG4B-221ENST00000483778 RABGAP1Q9Y3P9 1069 aa21.79■■□□□ 1.08
ATG4B-221ENST00000483778 MPHOSPH10O00566 681 aaKnown RBP21.78■■□□□ 1.08
ATG4B-221ENST00000483778 XRCC5P13010 732 aaKnown RBP21.78■■□□□ 1.08
ATG4B-221ENST00000483778 CACNB2Q08289 660 aaPredicted RBP21.78■■□□□ 1.08
ATG4B-221ENST00000483778 PRKAR2AP13861 404 aaKnown RBP21.77■■□□□ 1.08
ATG4B-221ENST00000483778 AKR1B1P15121 316 aa21.77■■□□□ 1.08
ATG4B-221ENST00000483778 USP14P54578 494 aa21.77■■□□□ 1.08
ATG4B-221ENST00000483778 LRRCC1Q9C099 1032 aa21.77■■□□□ 1.08
ATG4B-221ENST00000483778 PRO3102Q9H379 93 aa21.77■■□□□ 1.08
ATG4B-221ENST00000483778 FLRT1Q9NZU1 646 aa21.77■■□□□ 1.08
ATG4B-221ENST00000483778 PARP14Q460N5 1801 aa21.76■■□□□ 1.07
ATG4B-221ENST00000483778 SPDYE16A6NNV3 312 aaPredicted RBP21.76■■□□□ 1.07
ATG4B-221ENST00000483778 CCND3P30281 292 aaPredicted RBP21.76■■□□□ 1.07
ATG4B-221ENST00000483778 PUS7LQ9H0K6 701 aaKnown RBP21.76■■□□□ 1.07
ATG4B-221ENST00000483778 USP17L12C9JPN9 530 aa21.75■■□□□ 1.07
ATG4B-221ENST00000483778 USP17L21D6R901 530 aa21.75■■□□□ 1.07
ATG4B-221ENST00000483778 EVI5O60447 810 aa21.75■■□□□ 1.07
ATG4B-221ENST00000483778 C12orf60Q5U649 245 aa21.75■■□□□ 1.07
ATG4B-221ENST00000483778 CCAR1Q8IX12 1150 aaKnown RBP21.75■■□□□ 1.07
ATG4B-221ENST00000483778 GTF3C2Q8WUA4 911 aaPredicted RBP21.75■■□□□ 1.07
ATG4B-221ENST00000483778 SOCS4Q8WXH5 440 aa21.75■■□□□ 1.07
ATG4B-221ENST00000483778 CHMP4BQ9H444 224 aaKnown RBP21.75■■□□□ 1.07
ATG4B-221ENST00000483778 NR2E3Q9Y5X4 410 aa21.75■■□□□ 1.07
ATG4B-221ENST00000483778 COL11A1P12107 1806 aaPredicted RBP21.75■■□□□ 1.07
ATG4B-221ENST00000483778 FRMPD3Q5JV73 1810 aa21.75■■□□□ 1.07
ATG4B-221ENST00000483778 SZT2Q5T011 3432 aa21.74■■□□□ 1.07
ATG4B-221ENST00000483778 CDK8P49336 464 aa21.74■■□□□ 1.07
ATG4B-221ENST00000483778 MAP2K5Q13163 448 aa21.74■■□□□ 1.07
ATG4B-221ENST00000483778 TSHZ3Q63HK5 1081 aa21.74■■□□□ 1.07
ATG4B-221ENST00000483778 LBX2Q6XYB7 198 aa21.74■■□□□ 1.07
ATG4B-221ENST00000483778 NECAB2Q7Z6G3 386 aa21.74■■□□□ 1.07
ATG4B-221ENST00000483778 ATP8A2Q9NTI2 1148 aa21.74■■□□□ 1.07
ATG4B-221ENST00000483778 OGDHLQ9ULD0 1010 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms