RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 XAGE3Q8WTP9 111 aa11.18□□□□□ -0.62
MCF2-207ENST00000483690 MFSD2AQ8NA29 543 aa11.17□□□□□ -0.62
MCF2-207ENST00000483690 FBLIM1Q8WUP2 373 aa11.17□□□□□ -0.62
MCF2-207ENST00000483690 SEMA6CQ9H3T2 930 aa11.17□□□□□ -0.62
MCF2-207ENST00000483690 PCDHB10Q9UN67 800 aa11.17□□□□□ -0.62
MCF2-207ENST00000483690 CHMP4BP1P59074 171 aa11.16□□□□□ -0.62
MCF2-207ENST00000483690 SLC7A5Q01650 507 aa11.16□□□□□ -0.62
MCF2-207ENST00000483690 BBS9Q3SYG4 887 aa11.16□□□□□ -0.62
MCF2-207ENST00000483690 GNPTABQ3T906 1256 aa11.16□□□□□ -0.62
MCF2-207ENST00000483690 SGO2Q562F6 1265 aa11.16□□□□□ -0.62
MCF2-207ENST00000483690 SDE2Q6IQ49 451 aa11.16□□□□□ -0.62
MCF2-207ENST00000483690 BAHD1Q8TBE0 780 aaPredicted RBP11.16□□□□□ -0.62
MCF2-207ENST00000483690 UTP4Q969X6 686 aaKnown RBP11.16□□□□□ -0.62
MCF2-207ENST00000483690 SLC6A18Q96N87 628 aa11.16□□□□□ -0.62
MCF2-207ENST00000483690 ZNF214Q9UL59 606 aaPredicted RBP11.16□□□□□ -0.62
MCF2-207ENST00000483690 MRPL42Q9Y6G3 142 aaKnown RBP11.16□□□□□ -0.62
MCF2-207ENST00000483690 UBOX5O94941 541 aa11.15□□□□□ -0.62
MCF2-207ENST00000483690 NFICP08651 508 aa11.15□□□□□ -0.62
MCF2-207ENST00000483690 RXRBP28702 533 aa11.15□□□□□ -0.62
MCF2-207ENST00000483690 MAP7Q14244 749 aa11.15□□□□□ -0.62
MCF2-207ENST00000483690 KIAA1211LQ6NV74 962 aa11.15□□□□□ -0.62
MCF2-207ENST00000483690 EEPD1Q7L9B9 569 aa11.15□□□□□ -0.62
MCF2-207ENST00000483690 TXNRD3Q86VQ6 643 aa11.15□□□□□ -0.62
MCF2-207ENST00000483690 DNAJC7Q99615 494 aa11.15□□□□□ -0.62
MCF2-207ENST00000483690 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.15□□□□□ -0.62
MCF2-207ENST00000483690 CLEC3AO75596 197 aa11.14□□□□□ -0.63
MCF2-207ENST00000483690 BMP3P12645 472 aa11.14□□□□□ -0.63
MCF2-207ENST00000483690 MTERF2Q49AM1 385 aa11.14□□□□□ -0.63
MCF2-207ENST00000483690 TMEM192Q8IY95 271 aa11.14□□□□□ -0.63
MCF2-207ENST00000483690 DZIP1LQ8IYY4 767 aaKnown RBP11.14□□□□□ -0.63
MCF2-207ENST00000483690 EZH1Q92800 747 aaPredicted RBP11.14□□□□□ -0.63
MCF2-207ENST00000483690 MYRFLQ96LU7 910 aa11.14□□□□□ -0.63
MCF2-207ENST00000483690 LGR6Q9HBX8 967 aa11.14□□□□□ -0.63
MCF2-207ENST00000483690 SUCOQ9UBS9 1254 aaKnown RBP11.14□□□□□ -0.63
MCF2-207ENST00000483690 FAM181BA6NEQ2 426 aa11.13□□□□□ -0.63
MCF2-207ENST00000483690 PMS1P54277 932 aaKnown RBP11.13□□□□□ -0.63
MCF2-207ENST00000483690 MRM1Q6IN84 353 aaKnown RBP11.13□□□□□ -0.63
MCF2-207ENST00000483690 NLGN1Q8N2Q7 840 aa11.13□□□□□ -0.63
MCF2-207ENST00000483690 MAP4P27816 1152 aaKnown RBP11.12□□□□□ -0.63
MCF2-207ENST00000483690 ST13P5Q8NFI4 369 aaPredicted RBP11.12□□□□□ -0.63
MCF2-207ENST00000483690 KLHL6Q8WZ60 621 aa11.12□□□□□ -0.63
MCF2-207ENST00000483690 MEGF10Q96KG7 1140 aa11.12□□□□□ -0.63
MCF2-207ENST00000483690 MIPEPQ99797 713 aa11.12□□□□□ -0.63
MCF2-207ENST00000483690 FAM95CA0A1B0GW59 222 aa11.11□□□□□ -0.63
MCF2-207ENST00000483690 FAM20CQ8IXL6 584 aa11.11□□□□□ -0.63
MCF2-207ENST00000483690 KCNF1Q9H3M0 494 aa11.11□□□□□ -0.63
MCF2-207ENST00000483690 RNF225M0QZC1 329 aaPredicted RBP11.1□□□□□ -0.63
MCF2-207ENST00000483690 LETMD1Q6P1Q0 360 aa11.1□□□□□ -0.63
MCF2-207ENST00000483690 ARMC10Q8N2F6 343 aa11.1□□□□□ -0.63
MCF2-207ENST00000483690 PPP1R13LQ8WUF5 828 aa11.1□□□□□ -0.63
MCF2-207ENST00000483690 SMARCC1Q92922 1105 aaPredicted RBP11.1□□□□□ -0.63
MCF2-207ENST00000483690 RNPC3Q96LT9 517 aaKnown RBP11.1□□□□□ -0.63
MCF2-207ENST00000483690 FAM86C1Q9NVL1 165 aa11.1□□□□□ -0.63
MCF2-207ENST00000483690 CEP131Q9UPN4 1083 aa11.1□□□□□ -0.63
MCF2-207ENST00000483690 DYNC1LI2O43237 492 aaPredicted RBP11.09□□□□□ -0.63
MCF2-207ENST00000483690 TP53P04637 393 aaPredicted RBP11.09□□□□□ -0.63
MCF2-207ENST00000483690 TDRD10Q5VZ19 366 aaKnown RBP11.09□□□□□ -0.63
MCF2-207ENST00000483690 PPFIBP1Q86W92 1011 aa11.09□□□□□ -0.63
MCF2-207ENST00000483690 LILRB2Q8N423 598 aa11.09□□□□□ -0.63
MCF2-207ENST00000483690 ZNF669Q96BR6 464 aaPredicted RBP11.09□□□□□ -0.63
MCF2-207ENST00000483690 PRDM10Q9NQV6 1147 aa11.09□□□□□ -0.63
MCF2-207ENST00000483690 PFDN2Q9UHV9 154 aa11.09□□□□□ -0.63
MCF2-207ENST00000483690 DHX15O43143 795 aaKnown RBP11.08□□□□□ -0.64
MCF2-207ENST00000483690 SUSD5O60279 629 aa11.08□□□□□ -0.64
MCF2-207ENST00000483690 ETV3P41162 512 aa11.08□□□□□ -0.64
MCF2-207ENST00000483690 NFKBIBQ15653 356 aa11.08□□□□□ -0.64
MCF2-207ENST00000483690 PAOXQ6QHF9 649 aa11.08□□□□□ -0.64
MCF2-207ENST00000483690 CCDC144CPQ8IYA2 1237 aa11.08□□□□□ -0.64
MCF2-207ENST00000483690 DNAJB8Q8NHS0 232 aa11.08□□□□□ -0.64
MCF2-207ENST00000483690 SH3TC2Q8TF17 1288 aa11.08□□□□□ -0.64
MCF2-207ENST00000483690 PSMG3-AS1Q96PY0 264 aa11.08□□□□□ -0.64
MCF2-207ENST00000483690 EPN3Q9H201 632 aa11.08□□□□□ -0.64
MCF2-207ENST00000483690 KRBA1A5PL33 1030 aa11.07□□□□□ -0.64
MCF2-207ENST00000483690 SLITRK5O94991 958 aa11.07□□□□□ -0.64
MCF2-207ENST00000483690 NAT2P11245 290 aa11.07□□□□□ -0.64
MCF2-207ENST00000483690 RNF4P78317 190 aa11.07□□□□□ -0.64
MCF2-207ENST00000483690 SSRP1Q08945 709 aaKnown RBP11.07□□□□□ -0.64
MCF2-207ENST00000483690 CDK5R2Q13319 367 aa11.07□□□□□ -0.64
MCF2-207ENST00000483690 SPATC1Q76KD6 591 aa11.07□□□□□ -0.64
MCF2-207ENST00000483690 MKRN2Q9H000 416 aaKnown RBP11.07□□□□□ -0.64
MCF2-207ENST00000483690 KDM2BQ8NHM5 1336 aa11.07□□□□□ -0.64
MCF2-207ENST00000483690 C9IYK1 514 aa11.06□□□□□ -0.64
MCF2-207ENST00000483690 CLSTN1O94985 981 aa11.06□□□□□ -0.64
MCF2-207ENST00000483690 CHRNA4P43681 627 aa11.06□□□□□ -0.64
MCF2-207ENST00000483690 ZNF143P52747 638 aaPredicted RBP11.06□□□□□ -0.64
MCF2-207ENST00000483690 HEATR6Q6AI08 1181 aaKnown RBP11.06□□□□□ -0.64
MCF2-207ENST00000483690 SEZ6L2Q6UXD5 910 aa11.06□□□□□ -0.64
MCF2-207ENST00000483690 BEND4Q6ZU67 534 aa11.06□□□□□ -0.64
MCF2-207ENST00000483690 CDH24Q86UP0 819 aa11.06□□□□□ -0.64
MCF2-207ENST00000483690 ZNF512BQ96KM6 892 aaPredicted RBP11.06□□□□□ -0.64
MCF2-207ENST00000483690 KREMEN1Q96MU8 473 aa11.06□□□□□ -0.64
MCF2-207ENST00000483690 ZMYM5Q9UJ78 669 aa11.06□□□□□ -0.64
MCF2-207ENST00000483690 ENPP3O14638 875 aa11.05□□□□□ -0.64
MCF2-207ENST00000483690 HSD3B2P26439 372 aa11.05□□□□□ -0.64
MCF2-207ENST00000483690 SLC10A6Q3KNW5 377 aa11.05□□□□□ -0.64
MCF2-207ENST00000483690 TOP6BLQ8N6T0 577 aa11.05□□□□□ -0.64
MCF2-207ENST00000483690 GIMAP7Q8NHV1 300 aa11.05□□□□□ -0.64
MCF2-207ENST00000483690 RIN3Q8TB24 985 aa11.05□□□□□ -0.64
MCF2-207ENST00000483690 HAUS7Q99871 368 aa11.05□□□□□ -0.64
MCF2-207ENST00000483690 C1GALT1Q9NS00 363 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms