RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 ANKLE1Q8NAG6 615 aa16.95■□□□□ 0.3
VARS-226ENST00000483275 USP6NLQ92738 828 aa16.95■□□□□ 0.3
VARS-226ENST00000483275 CWC22Q9HCG8 908 aaKnown RBP16.95■□□□□ 0.3
VARS-226ENST00000483275 SERPINB13Q9UIV8 391 aa16.95■□□□□ 0.3
VARS-226ENST00000483275 A0A0G2JMZ2 1700 aa16.94■□□□□ 0.3
VARS-226ENST00000483275 VCAM1P19320 739 aa16.94■□□□□ 0.3
VARS-226ENST00000483275 SHMT1P34896 483 aa16.94■□□□□ 0.3
VARS-226ENST00000483275 PLCD1P51178 756 aa16.94■□□□□ 0.3
VARS-226ENST00000483275 MORN1Q5T089 497 aa16.94■□□□□ 0.3
VARS-226ENST00000483275 TATDN1Q6P1N9 297 aa16.94■□□□□ 0.3
VARS-226ENST00000483275 PLEKHH3Q7Z736 793 aa16.94■□□□□ 0.3
VARS-226ENST00000483275 APBA2Q99767 749 aa16.94■□□□□ 0.3
VARS-226ENST00000483275 FLRT1Q9NZU1 646 aa16.94■□□□□ 0.3
VARS-226ENST00000483275 OGDHLQ9ULD0 1010 aa16.94■□□□□ 0.3
VARS-226ENST00000483275 RLFQ13129 1914 aa16.94■□□□□ 0.3
VARS-226ENST00000483275 XRCC5P13010 732 aaKnown RBP16.93■□□□□ 0.3
VARS-226ENST00000483275 RGS2P41220 211 aa16.93■□□□□ 0.3
VARS-226ENST00000483275 MAGEA10P43363 369 aaPredicted RBP16.93■□□□□ 0.3
VARS-226ENST00000483275 ABCB5Q2M3G0 1257 aa16.93■□□□□ 0.3
VARS-226ENST00000483275 CERKLQ49MI3 558 aaPredicted RBP16.93■□□□□ 0.3
VARS-226ENST00000483275 EDC3Q96F86 508 aaKnown RBP16.93■□□□□ 0.3
VARS-226ENST00000483275 GDF15Q99988 308 aa16.93■□□□□ 0.3
VARS-226ENST00000483275 RIOK1Q9BRS2 568 aaKnown RBP16.93■□□□□ 0.3
VARS-226ENST00000483275 GINM1Q9NU53 330 aa16.93■□□□□ 0.3
VARS-226ENST00000483275 PARP14Q460N5 1801 aa16.93■□□□□ 0.3
VARS-226ENST00000483275 MYH7P12883 1935 aa16.92■□□□□ 0.3
VARS-226ENST00000483275 CUL9Q8IWT3 2517 aa16.92■□□□□ 0.3
VARS-226ENST00000483275 CYP2D6P10635 497 aa16.92■□□□□ 0.3
VARS-226ENST00000483275 GUCY1A2P33402 732 aa16.92■□□□□ 0.3
VARS-226ENST00000483275 MAP3K12Q12852 859 aa16.92■□□□□ 0.3
VARS-226ENST00000483275 SEPT2Q15019 361 aa16.92■□□□□ 0.3
VARS-226ENST00000483275 SLFNL1Q499Z3 407 aa16.92■□□□□ 0.3
VARS-226ENST00000483275 CLEC10AQ8IUN9 316 aa16.92■□□□□ 0.3
VARS-226ENST00000483275 MIER1Q8N108 512 aa16.92■□□□□ 0.3
VARS-226ENST00000483275 SLC44A5Q8NCS7 719 aa16.92■□□□□ 0.3
VARS-226ENST00000483275 C12orf42Q96LP6 360 aa16.92■□□□□ 0.3
VARS-226ENST00000483275 EHD4Q9H223 541 aa16.92■□□□□ 0.3
VARS-226ENST00000483275 RPAP3Q9H6T3 665 aaPredicted RBP16.92■□□□□ 0.3
VARS-226ENST00000483275 BTBD7Q9P203 1132 aa16.92■□□□□ 0.3
VARS-226ENST00000483275 MAGEB6P1A0A0J9YX57 407 aa16.91■□□□□ 0.3
VARS-226ENST00000483275 A0A1W2PPC1 479 aa16.91■□□□□ 0.3
VARS-226ENST00000483275 USP17L15C9J2P7 530 aa16.91■□□□□ 0.3
VARS-226ENST00000483275 USP17L13C9JLJ4 530 aa16.91■□□□□ 0.3
VARS-226ENST00000483275 USP17L11C9JVI0 530 aa16.91■□□□□ 0.3
VARS-226ENST00000483275 USP17L18D6R9N7 530 aa16.91■□□□□ 0.3
VARS-226ENST00000483275 USP17L22D6RA61 530 aa16.91■□□□□ 0.3
VARS-226ENST00000483275 USP17L17D6RBQ6 530 aa16.91■□□□□ 0.3
VARS-226ENST00000483275 USP17L19D6RCP7 530 aa16.91■□□□□ 0.3
VARS-226ENST00000483275 USP17L20D6RJB6 530 aa16.91■□□□□ 0.3
VARS-226ENST00000483275 PDE6AP16499 860 aa16.91■□□□□ 0.3
VARS-226ENST00000483275 USP17L24Q0WX57 530 aa16.91■□□□□ 0.3
VARS-226ENST00000483275 MAP2K5Q13163 448 aa16.91■□□□□ 0.3
VARS-226ENST00000483275 LRRC26Q2I0M4 334 aa16.91■□□□□ 0.3
VARS-226ENST00000483275 LHX8Q68G74 356 aa16.91■□□□□ 0.3
VARS-226ENST00000483275 Q7L0L9 218 aa16.91■□□□□ 0.3
VARS-226ENST00000483275 SDR42E1Q8WUS8 393 aa16.91■□□□□ 0.3
VARS-226ENST00000483275 DNAJC2Q99543 621 aaKnown RBP16.91■□□□□ 0.3
VARS-226ENST00000483275 COL11A1P12107 1806 aaPredicted RBP16.91■□□□□ 0.3
VARS-226ENST00000483275 SPDYE16A6NNV3 312 aaPredicted RBP16.9■□□□□ 0.3
VARS-226ENST00000483275 GOLIM4O00461 696 aa16.9■□□□□ 0.3
VARS-226ENST00000483275 MPHOSPH10O00566 681 aaKnown RBP16.9■□□□□ 0.3
VARS-226ENST00000483275 POLR3DP05423 398 aaPredicted RBP16.9■□□□□ 0.3
VARS-226ENST00000483275 CATSPERGQ6ZRH7 1159 aa16.9■□□□□ 0.3
VARS-226ENST00000483275 TTC6Q86TZ1 520 aa16.9■□□□□ 0.3
VARS-226ENST00000483275 GTF3C2Q8WUA4 911 aaPredicted RBP16.9■□□□□ 0.3
VARS-226ENST00000483275 KIAA1683Q9H0B3 1180 aa16.9■□□□□ 0.3
VARS-226ENST00000483275 RABGAP1Q9Y3P9 1069 aa16.9■□□□□ 0.3
VARS-226ENST00000483275 ZNF236Q9UL36 1845 aa16.89■□□□□ 0.29
VARS-226ENST00000483275 A0A1W2PRG0 241 aa16.89■□□□□ 0.29
VARS-226ENST00000483275 SMIM22K7EJ46 135 aa16.89■□□□□ 0.29
VARS-226ENST00000483275 COL6A1P12109 1028 aa16.89■□□□□ 0.29
VARS-226ENST00000483275 CAPN2P17655 700 aa16.89■□□□□ 0.29
VARS-226ENST00000483275 SLC9C2Q5TAH2 1124 aa16.89■□□□□ 0.29
VARS-226ENST00000483275 ERC1Q8IUD2 1116 aa16.89■□□□□ 0.29
VARS-226ENST00000483275 LCORLQ8N3X6 602 aa16.89■□□□□ 0.29
VARS-226ENST00000483275 RHPN1Q8TCX5 695 aa16.89■□□□□ 0.29
VARS-226ENST00000483275 MCM9Q9NXL9 1143 aa16.89■□□□□ 0.29
VARS-226ENST00000483275 ZNF532Q9HCE3 1301 aa16.89■□□□□ 0.29
VARS-226ENST00000483275 LTBP2Q14767 1821 aa16.89■□□□□ 0.29
VARS-226ENST00000483275 CHGBP05060 677 aa16.88■□□□□ 0.29
VARS-226ENST00000483275 CYP2C19P33261 490 aa16.88■□□□□ 0.29
VARS-226ENST00000483275 USP14P54578 494 aa16.88■□□□□ 0.29
VARS-226ENST00000483275 MDM2Q00987 491 aaPredicted RBP16.88■□□□□ 0.29
VARS-226ENST00000483275 KIAA1755Q5JYT7 1200 aa16.88■□□□□ 0.29
VARS-226ENST00000483275 TRMT44Q8IYL2 757 aaKnown RBP16.88■□□□□ 0.29
VARS-226ENST00000483275 TRPV1Q8NER1 839 aa16.88■□□□□ 0.29
VARS-226ENST00000483275 NPLOC4Q8TAT6 608 aa16.88■□□□□ 0.29
VARS-226ENST00000483275 DYNLL2Q96FJ2 89 aa16.88■□□□□ 0.29
VARS-226ENST00000483275 TANGO6Q9C0B7 1094 aa16.88■□□□□ 0.29
VARS-226ENST00000483275 UBE2OQ9C0C9 1292 aaKnown RBP16.88■□□□□ 0.29
VARS-226ENST00000483275 CABP5Q9NP86 173 aa16.88■□□□□ 0.29
VARS-226ENST00000483275 TCRBV5S4A2TA0A5A2 114 aa16.87■□□□□ 0.29
VARS-226ENST00000483275 PTPREP23469 700 aa16.87■□□□□ 0.29
VARS-226ENST00000483275 CNGA1P29973 690 aa16.87■□□□□ 0.29
VARS-226ENST00000483275 BMP8BP34820 402 aa16.87■□□□□ 0.29
VARS-226ENST00000483275 CCNA1P78396 465 aa16.87■□□□□ 0.29
VARS-226ENST00000483275 GABPAQ06546 454 aa16.87■□□□□ 0.29
VARS-226ENST00000483275 SAMD1Q6SPF0 538 aaPredicted RBP16.87■□□□□ 0.29
VARS-226ENST00000483275 CERS3Q8IU89 383 aa16.87■□□□□ 0.29
VARS-226ENST00000483275 CRNKL1Q9BZJ0 848 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms