RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 GTF3C2Q8WUA4 911 aaPredicted RBP9.04□□□□□ -0.96
CSDE1-206ENST00000483030 FRAT1Q92837 279 aaPredicted RBP9.04□□□□□ -0.96
CSDE1-206ENST00000483030 CLUAP1Q96AJ1 413 aa9.04□□□□□ -0.96
CSDE1-206ENST00000483030 APBA2Q99767 749 aa9.04□□□□□ -0.96
CSDE1-206ENST00000483030 SENP6Q9GZR1 1112 aaPredicted RBP9.04□□□□□ -0.96
CSDE1-206ENST00000483030 PIH1D3Q9NQM4 214 aaKnown RBP9.04□□□□□ -0.96
CSDE1-206ENST00000483030 RABGAP1Q9Y3P9 1069 aa9.04□□□□□ -0.96
CSDE1-206ENST00000483030 FPGT-TNNI3KV9GXZ4 949 aa9.04□□□□□ -0.96
CSDE1-206ENST00000483030 PTPRFP10586 1907 aa9.03□□□□□ -0.96
CSDE1-206ENST00000483030 USP17L15C9J2P7 530 aa9.03□□□□□ -0.96
CSDE1-206ENST00000483030 USP17L13C9JLJ4 530 aa9.03□□□□□ -0.96
CSDE1-206ENST00000483030 USP17L11C9JVI0 530 aa9.03□□□□□ -0.96
CSDE1-206ENST00000483030 USP17L18D6R9N7 530 aa9.03□□□□□ -0.96
CSDE1-206ENST00000483030 USP17L22D6RA61 530 aa9.03□□□□□ -0.96
CSDE1-206ENST00000483030 USP17L17D6RBQ6 530 aa9.03□□□□□ -0.96
CSDE1-206ENST00000483030 USP17L19D6RCP7 530 aa9.03□□□□□ -0.96
CSDE1-206ENST00000483030 USP17L20D6RJB6 530 aa9.03□□□□□ -0.96
CSDE1-206ENST00000483030 SURF6O75683 361 aaKnown RBP9.03□□□□□ -0.96
CSDE1-206ENST00000483030 BCAR3O75815 825 aa9.03□□□□□ -0.96
CSDE1-206ENST00000483030 CNMDO75829 334 aa9.03□□□□□ -0.96
CSDE1-206ENST00000483030 GLRX3O76003 335 aaKnown RBP9.03□□□□□ -0.96
CSDE1-206ENST00000483030 CNGA1P29973 690 aa9.03□□□□□ -0.96
CSDE1-206ENST00000483030 USP5P45974 858 aa9.03□□□□□ -0.96
CSDE1-206ENST00000483030 CCNA1P78396 465 aa9.03□□□□□ -0.96
CSDE1-206ENST00000483030 USP17L24Q0WX57 530 aa9.03□□□□□ -0.96
CSDE1-206ENST00000483030 RAB3GAP1Q15042 981 aa9.03□□□□□ -0.96
CSDE1-206ENST00000483030 MFSD14CQ5VZR4 134 aa9.03□□□□□ -0.96
CSDE1-206ENST00000483030 CATSPERGQ6ZRH7 1159 aa9.03□□□□□ -0.96
CSDE1-206ENST00000483030 MIGA1Q8NAN2 632 aa9.03□□□□□ -0.96
CSDE1-206ENST00000483030 FEZ1Q99689 392 aa9.03□□□□□ -0.96
CSDE1-206ENST00000483030 LBHD1Q9BQE6 289 aaPredicted RBP9.03□□□□□ -0.96
CSDE1-206ENST00000483030 GPR108Q9NPR9 543 aa9.03□□□□□ -0.96
CSDE1-206ENST00000483030 FLRT1Q9NZU1 646 aa9.03□□□□□ -0.96
CSDE1-206ENST00000483030 A0A0C4DFX4 3053 aa9.03□□□□□ -0.96
CSDE1-206ENST00000483030 SLC15A5A6NIM6 579 aa9.02□□□□□ -0.97
CSDE1-206ENST00000483030 POTEB2H3BUK9 544 aa9.02□□□□□ -0.97
CSDE1-206ENST00000483030 IDH1O75874 414 aaKnown RBP9.02□□□□□ -0.97
CSDE1-206ENST00000483030 PTPREP23469 700 aa9.02□□□□□ -0.97
CSDE1-206ENST00000483030 ATN1P54259 1190 aaPredicted RBP9.02□□□□□ -0.97
CSDE1-206ENST00000483030 ATP8B2P98198 1209 aa9.02□□□□□ -0.97
CSDE1-206ENST00000483030 ATP2B2Q01814 1243 aa9.02□□□□□ -0.97
CSDE1-206ENST00000483030 POLA2Q14181 598 aa9.02□□□□□ -0.97
CSDE1-206ENST00000483030 CERKLQ49MI3 558 aaPredicted RBP9.02□□□□□ -0.97
CSDE1-206ENST00000483030 TATDN1Q6P1N9 297 aa9.02□□□□□ -0.97
CSDE1-206ENST00000483030 ACER1Q8TDN7 264 aa9.02□□□□□ -0.97
CSDE1-206ENST00000483030 ZNF512BQ96KM6 892 aaPredicted RBP9.02□□□□□ -0.97
CSDE1-206ENST00000483030 C12orf42Q96LP6 360 aa9.02□□□□□ -0.97
CSDE1-206ENST00000483030 FAM161BQ96MY7 647 aa9.02□□□□□ -0.97
CSDE1-206ENST00000483030 CCDC8Q9H0W5 538 aaPredicted RBP9.02□□□□□ -0.97
CSDE1-206ENST00000483030 BTBD7Q9P203 1132 aa9.02□□□□□ -0.97
CSDE1-206ENST00000483030 DDX20Q9UHI6 824 aaKnown RBP9.02□□□□□ -0.97
CSDE1-206ENST00000483030 SERPINB13Q9UIV8 391 aa9.02□□□□□ -0.97
CSDE1-206ENST00000483030 IVNS1ABPQ9Y6Y0 642 aa9.02□□□□□ -0.97
CSDE1-206ENST00000483030 COL6A3P12111 3177 aa9.02□□□□□ -0.97
CSDE1-206ENST00000483030 IGSF3O75054 1194 aa9.01□□□□□ -0.97
CSDE1-206ENST00000483030 HOXC6P09630 235 aa9.01□□□□□ -0.97
CSDE1-206ENST00000483030 VCAM1P19320 739 aa9.01□□□□□ -0.97
CSDE1-206ENST00000483030 CYP2C19P33261 490 aa9.01□□□□□ -0.97
CSDE1-206ENST00000483030 USP14P54578 494 aa9.01□□□□□ -0.97
CSDE1-206ENST00000483030 ABCB5Q2M3G0 1257 aa9.01□□□□□ -0.97
CSDE1-206ENST00000483030 FAM109BQ6ICB4 259 aaPredicted RBP9.01□□□□□ -0.97
CSDE1-206ENST00000483030 TMEM57Q8N5G2 664 aa9.01□□□□□ -0.97
CSDE1-206ENST00000483030 MAGEB6Q8N7X4 407 aa9.01□□□□□ -0.97
CSDE1-206ENST00000483030 TRPV1Q8NER1 839 aa9.01□□□□□ -0.97
CSDE1-206ENST00000483030 NPLOC4Q8TAT6 608 aa9.01□□□□□ -0.97
CSDE1-206ENST00000483030 SSH3Q8TE77 659 aa9.01□□□□□ -0.97
CSDE1-206ENST00000483030 LPAR1Q92633 364 aa9.01□□□□□ -0.97
CSDE1-206ENST00000483030 COL25A1Q9BXS0 654 aaPredicted RBP9.01□□□□□ -0.97
CSDE1-206ENST00000483030 KIAA1683Q9H0B3 1180 aa9.01□□□□□ -0.97
CSDE1-206ENST00000483030 CABP5Q9NP86 173 aa9.01□□□□□ -0.97
CSDE1-206ENST00000483030 TLR7Q9NYK1 1049 aaKnown RBP9.01□□□□□ -0.97
CSDE1-206ENST00000483030 DBNLQ9UJU6 430 aaKnown RBP9.01□□□□□ -0.97
CSDE1-206ENST00000483030 ALPK3Q96L96 1907 aa9.01□□□□□ -0.97
CSDE1-206ENST00000483030 LOC285556D6RIA3 1793 aa9.01□□□□□ -0.97
CSDE1-206ENST00000483030 SPDYE16A6NNV3 312 aaPredicted RBP9□□□□□ -0.97
CSDE1-206ENST00000483030 MSCO60682 206 aa9□□□□□ -0.97
CSDE1-206ENST00000483030 PLCD1P51178 756 aa9□□□□□ -0.97
CSDE1-206ENST00000483030 RTP1P59025 263 aa9□□□□□ -0.97
CSDE1-206ENST00000483030 GRB14Q14449 540 aa9□□□□□ -0.97
CSDE1-206ENST00000483030 GJC2Q5T442 439 aaPredicted RBP9□□□□□ -0.97
CSDE1-206ENST00000483030 LBX2Q6XYB7 198 aa9□□□□□ -0.97
CSDE1-206ENST00000483030 DPP9Q86TI2 863 aa9□□□□□ -0.97
CSDE1-206ENST00000483030 TTC6Q86TZ1 520 aa9□□□□□ -0.97
CSDE1-206ENST00000483030 PHF6Q8IWS0 365 aaKnown RBP eCLIP9□□□□□ -0.97
CSDE1-206ENST00000483030 EAF2Q96CJ1 260 aaPredicted RBP9□□□□□ -0.97
CSDE1-206ENST00000483030 GUCD1Q96NT3 240 aa9□□□□□ -0.97
CSDE1-206ENST00000483030 EHD4Q9H223 541 aa9□□□□□ -0.97
CSDE1-206ENST00000483030 RPAP3Q9H6T3 665 aaPredicted RBP9□□□□□ -0.97
CSDE1-206ENST00000483030 C1orf115Q9H7X2 142 aa9□□□□□ -0.97
CSDE1-206ENST00000483030 PRKAG2Q9UGJ0 569 aa9□□□□□ -0.97
CSDE1-206ENST00000483030 DDX60LQ5H9U9 1706 aaKnown RBP9□□□□□ -0.97
CSDE1-206ENST00000483030 CUL9Q8IWT3 2517 aa8.99□□□□□ -0.97
CSDE1-206ENST00000483030 PLXNB2O15031 1838 aa8.99□□□□□ -0.97
CSDE1-206ENST00000483030 DNM1LO00429 736 aa8.99□□□□□ -0.97
CSDE1-206ENST00000483030 GUCY1A2P33402 732 aa8.99□□□□□ -0.97
CSDE1-206ENST00000483030 SHMT1P34896 483 aa8.99□□□□□ -0.97
CSDE1-206ENST00000483030 MAP3K12Q12852 859 aa8.99□□□□□ -0.97
CSDE1-206ENST00000483030 SEPT2Q15019 361 aa8.99□□□□□ -0.97
CSDE1-206ENST00000483030 ANO1Q5XXA6 986 aa8.99□□□□□ -0.97
CSDE1-206ENST00000483030 CERS3Q8IU89 383 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms