RNA–Protein interactions for RNA: ENST00000482741.1

TVP23B-203, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 3,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-203ENST00000482741 NBPF7P0C2Y1 421 aaPredicted RBP9.25□□□□□ -0.93
TVP23B-203ENST00000482741 GNALP38405 381 aa9.25□□□□□ -0.93
TVP23B-203ENST00000482741 GTF2IP78347 998 aa9.25□□□□□ -0.93
TVP23B-203ENST00000482741 ZNF454Q8N9F8 522 aa9.25□□□□□ -0.93
TVP23B-203ENST00000482741 SUPT20HQ8NEM7 779 aa9.25□□□□□ -0.93
TVP23B-203ENST00000482741 BICC1Q9H694 974 aaKnown RBP9.25□□□□□ -0.93
TVP23B-203ENST00000482741 PTPRHQ9HD43 1115 aa9.25□□□□□ -0.93
TVP23B-203ENST00000482741 BOLA1Q9Y3E2 137 aa9.25□□□□□ -0.93
TVP23B-203ENST00000482741 UQCRFS1P1P0C7P4 283 aa9.24□□□□□ -0.93
TVP23B-203ENST00000482741 UBTFL1P0CB47 393 aaPredicted RBP9.24□□□□□ -0.93
TVP23B-203ENST00000482741 TERF1P54274 439 aa9.24□□□□□ -0.93
TVP23B-203ENST00000482741 GHRHRQ02643 423 aa9.24□□□□□ -0.93
TVP23B-203ENST00000482741 LPIN2Q92539 896 aa9.24□□□□□ -0.93
TVP23B-203ENST00000482741 DNAJC7Q99615 494 aa9.24□□□□□ -0.93
TVP23B-203ENST00000482741 HELLSQ9NRZ9 838 aa9.24□□□□□ -0.93
TVP23B-203ENST00000482741 PLXNA1Q9UIW2 1896 aa9.24□□□□□ -0.93
TVP23B-203ENST00000482741 ZFYP08048 801 aaPredicted RBP9.24□□□□□ -0.93
TVP23B-203ENST00000482741 XRCC5P13010 732 aaKnown RBP9.24□□□□□ -0.93
TVP23B-203ENST00000482741 GTF2E1P29083 439 aaPredicted RBP9.24□□□□□ -0.93
TVP23B-203ENST00000482741 ALDH1B1P30837 517 aa9.24□□□□□ -0.93
TVP23B-203ENST00000482741 TRAPPC10P48553 1259 aa9.24□□□□□ -0.93
TVP23B-203ENST00000482741 UBE3CQ15386 1083 aa9.24□□□□□ -0.93
TVP23B-203ENST00000482741 C8orf34Q49A92 452 aa9.24□□□□□ -0.93
TVP23B-203ENST00000482741 SBK1Q52WX2 424 aa9.24□□□□□ -0.93
TVP23B-203ENST00000482741 ANKS3Q6ZW76 656 aa9.24□□□□□ -0.93
TVP23B-203ENST00000482741 SNX21Q969T3 373 aa9.24□□□□□ -0.93
TVP23B-203ENST00000482741 ZBTB39O15060 712 aa9.23□□□□□ -0.93
TVP23B-203ENST00000482741 PRPF40AO75400 957 aaKnown RBP9.23□□□□□ -0.93
TVP23B-203ENST00000482741 FOSP01100 380 aaPredicted RBP9.23□□□□□ -0.93
TVP23B-203ENST00000482741 CLCN6P51797 869 aa9.23□□□□□ -0.93
TVP23B-203ENST00000482741 SEC13P55735 322 aa9.23□□□□□ -0.93
TVP23B-203ENST00000482741 EXOC6Q8TAG9 804 aa9.23□□□□□ -0.93
TVP23B-203ENST00000482741 RBM17Q96I25 401 aaKnown RBP9.23□□□□□ -0.93
TVP23B-203ENST00000482741 PFDN2Q9UHV9 154 aa9.23□□□□□ -0.93
TVP23B-203ENST00000482741 XDHP47989 1333 aa9.23□□□□□ -0.93
TVP23B-203ENST00000482741 ARID2Q68CP9 1835 aa9.23□□□□□ -0.93
TVP23B-203ENST00000482741 WDR81Q562E7 1941 aa9.23□□□□□ -0.93
TVP23B-203ENST00000482741 NDUFB5O43674 189 aa9.23□□□□□ -0.93
TVP23B-203ENST00000482741 PDE8BO95263 885 aa9.23□□□□□ -0.93
TVP23B-203ENST00000482741 TOMM20Q15388 145 aa9.23□□□□□ -0.93
TVP23B-203ENST00000482741 TNNI3KQ59H18 835 aa9.23□□□□□ -0.93
TVP23B-203ENST00000482741 EMID1Q96A84 441 aaPredicted RBP9.23□□□□□ -0.93
TVP23B-203ENST00000482741 RBM19Q9Y4C8 960 aaKnown RBP9.23□□□□□ -0.93
TVP23B-203ENST00000482741 CTDP1Q9Y5B0 961 aaPredicted RBP9.23□□□□□ -0.93
TVP23B-203ENST00000482741 FPGT-TNNI3KV9GXZ4 949 aa9.23□□□□□ -0.93
TVP23B-203ENST00000482741 G3V3G9 751 aa9.23□□□□□ -0.93
TVP23B-203ENST00000482741 PRPF3O43395 683 aaKnown RBP9.23□□□□□ -0.93
TVP23B-203ENST00000482741 SCGB1D2O95969 90 aa9.23□□□□□ -0.93
TVP23B-203ENST00000482741 PUM3Q15397 648 aaKnown RBP9.23□□□□□ -0.93
TVP23B-203ENST00000482741 PRPF38BQ5VTL8 546 aaKnown RBP9.23□□□□□ -0.93
TVP23B-203ENST00000482741 TAS1R3Q7RTX0 852 aa9.23□□□□□ -0.93
TVP23B-203ENST00000482741 TCP11L1Q9NUJ3 509 aa9.23□□□□□ -0.93
TVP23B-203ENST00000482741 STK32BQ9NY57 414 aa9.23□□□□□ -0.93
TVP23B-203ENST00000482741 CEP126Q9P2H0 1117 aa9.23□□□□□ -0.93
TVP23B-203ENST00000482741 PNMA6EA0A0J9YXQ4 647 aa9.22□□□□□ -0.93
TVP23B-203ENST00000482741 NRDCO43847 1150 aa9.22□□□□□ -0.93
TVP23B-203ENST00000482741 RPS12P25398 132 aaKnown RBP9.22□□□□□ -0.93
TVP23B-203ENST00000482741 TPTE2Q6XPS3 522 aa9.22□□□□□ -0.93
TVP23B-203ENST00000482741 RHPN1Q8TCX5 695 aa9.22□□□□□ -0.93
TVP23B-203ENST00000482741 LTV1Q96GA3 475 aaPredicted RBP9.22□□□□□ -0.93
TVP23B-203ENST00000482741 CEP89Q96ST8 783 aa9.22□□□□□ -0.93
TVP23B-203ENST00000482741 EHD4Q9H223 541 aa9.22□□□□□ -0.93
TVP23B-203ENST00000482741 HOMER2Q9NSB8 354 aa9.22□□□□□ -0.93
TVP23B-203ENST00000482741 DAAM1Q9Y4D1 1078 aa9.22□□□□□ -0.93
TVP23B-203ENST00000482741 COL4A6Q14031 1691 aa9.22□□□□□ -0.93
TVP23B-203ENST00000482741 PHF14O94880 888 aa9.22□□□□□ -0.93
TVP23B-203ENST00000482741 DEPDC7Q96QD5 511 aa9.22□□□□□ -0.93
TVP23B-203ENST00000482741 PRKD2Q9BZL6 878 aa9.22□□□□□ -0.93
TVP23B-203ENST00000482741 BAZ2AQ9UIF9 1905 aaKnown RBP9.22□□□□□ -0.93
TVP23B-203ENST00000482741 KATNA1O75449 491 aa9.22□□□□□ -0.93
TVP23B-203ENST00000482741 DAB2P98082 770 aa9.22□□□□□ -0.93
TVP23B-203ENST00000482741 LILRB2Q8N423 598 aa9.22□□□□□ -0.93
TVP23B-203ENST00000482741 ADAM33Q9BZ11 813 aa9.22□□□□□ -0.93
TVP23B-203ENST00000482741 DEFB129Q9H1M3 183 aa9.22□□□□□ -0.93
TVP23B-203ENST00000482741 TSKSQ9UJT2 592 aa9.22□□□□□ -0.93
TVP23B-203ENST00000482741 PPP2R3BQ9Y5P8 575 aa9.22□□□□□ -0.93
TVP23B-203ENST00000482741 SHTN1A0MZ66 631 aa9.21□□□□□ -0.93
TVP23B-203ENST00000482741 PPP1R12AO14974 1030 aaPredicted RBP9.21□□□□□ -0.93
TVP23B-203ENST00000482741 EIF1AXP47813 144 aaKnown RBP9.21□□□□□ -0.93
TVP23B-203ENST00000482741 NASPP49321 788 aaPredicted RBP9.21□□□□□ -0.93
TVP23B-203ENST00000482741 TTF1Q15361 905 aaPredicted RBP9.21□□□□□ -0.93
TVP23B-203ENST00000482741 EML3Q32P44 896 aa9.21□□□□□ -0.93
TVP23B-203ENST00000482741 SECISBP2LQ93073 1101 aaKnown RBP9.21□□□□□ -0.93
TVP23B-203ENST00000482741 DSCC1Q9BVC3 393 aa9.21□□□□□ -0.93
TVP23B-203ENST00000482741 LRRCC1Q9C099 1032 aa9.21□□□□□ -0.93
TVP23B-203ENST00000482741 AS3MTQ9HBK9 375 aa9.21□□□□□ -0.93
TVP23B-203ENST00000482741 PDILTQ8N807 584 aa9.21□□□□□ -0.94
TVP23B-203ENST00000482741 SLKQ9H2G2 1235 aaPredicted RBP9.21□□□□□ -0.94
TVP23B-203ENST00000482741 PNMA3Q9UL41 463 aa9.21□□□□□ -0.94
TVP23B-203ENST00000482741 FZD9O00144 591 aa9.2□□□□□ -0.94
TVP23B-203ENST00000482741 SLC10A3P09131 477 aa9.2□□□□□ -0.94
TVP23B-203ENST00000482741 ST5P78524 1137 aa9.2□□□□□ -0.94
TVP23B-203ENST00000482741 MAMSTRQ6ZN01 415 aa9.2□□□□□ -0.94
TVP23B-203ENST00000482741 CELF2-AS1Q8N7Q2 184 aa9.2□□□□□ -0.94
TVP23B-203ENST00000482741 IRS4O14654 1257 aaPredicted RBP9.2□□□□□ -0.94
TVP23B-203ENST00000482741 PDE1AP54750 535 aa9.2□□□□□ -0.94
TVP23B-203ENST00000482741 FAM26DQ5JW98 314 aa9.2□□□□□ -0.94
TVP23B-203ENST00000482741 MYD88Q99836 296 aa9.2□□□□□ -0.94
TVP23B-203ENST00000482741 COA1Q9GZY4 146 aa9.2□□□□□ -0.94
TVP23B-203ENST00000482741 TNNQ9UQP3 1299 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms