RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 ZNF444Q8N0Y2 327 aaPredicted RBP19.74■□□□□ 0.75
HMGN1-214ENST00000482733 FEZ1Q99689 392 aa19.74■□□□□ 0.75
HMGN1-214ENST00000482733 BAZ2AQ9UIF9 1905 aaKnown RBP19.74■□□□□ 0.75
HMGN1-214ENST00000482733 RASA1P20936 1047 aa19.73■□□□□ 0.75
HMGN1-214ENST00000482733 DSCC1Q9BVC3 393 aa19.73■□□□□ 0.75
HMGN1-214ENST00000482733 KIAA1683Q9H0B3 1180 aa19.73■□□□□ 0.75
HMGN1-214ENST00000482733 R3HDMLQ9H3Y0 253 aa19.73■□□□□ 0.75
HMGN1-214ENST00000482733 SH2D4AQ9H788 454 aa19.73■□□□□ 0.75
HMGN1-214ENST00000482733 KANSL2Q9H9L4 492 aa19.73■□□□□ 0.75
HMGN1-214ENST00000482733 PNMA3Q9UL41 463 aa19.73■□□□□ 0.75
HMGN1-214ENST00000482733 TLR2O60603 784 aa19.72■□□□□ 0.75
HMGN1-214ENST00000482733 FKTNO75072 461 aa19.72■□□□□ 0.75
HMGN1-214ENST00000482733 STK11IPQ8N1F8 1099 aa19.72■□□□□ 0.75
HMGN1-214ENST00000482733 ZNF296Q8WUU4 475 aaPredicted RBP19.72■□□□□ 0.75
HMGN1-214ENST00000482733 ARHGEF10LQ9HCE6 1279 aa19.72■□□□□ 0.75
HMGN1-214ENST00000482733 ATAD5Q96QE3 1844 aa19.72■□□□□ 0.75
HMGN1-214ENST00000482733 OSBPP22059 807 aa19.71■□□□□ 0.75
HMGN1-214ENST00000482733 ICA1Q05084 483 aa19.71■□□□□ 0.75
HMGN1-214ENST00000482733 C12orf42Q96LP6 360 aa19.71■□□□□ 0.75
HMGN1-214ENST00000482733 CTNNA3Q9UI47 895 aa19.71■□□□□ 0.75
HMGN1-214ENST00000482733 PHIPQ8WWQ0 1821 aa19.71■□□□□ 0.75
HMGN1-214ENST00000482733 PCP11498 1178 aaKnown RBP19.7■□□□□ 0.74
HMGN1-214ENST00000482733 TREML2Q5T2D2 321 aa19.7■□□□□ 0.74
HMGN1-214ENST00000482733 COL13A1Q5TAT6 717 aaPredicted RBP19.7■□□□□ 0.74
HMGN1-214ENST00000482733 SKAP1Q86WV1 359 aa19.7■□□□□ 0.74
HMGN1-214ENST00000482733 ACER1Q8TDN7 264 aa19.7■□□□□ 0.74
HMGN1-214ENST00000482733 EMILIN3Q9NT22 766 aa19.7■□□□□ 0.74
HMGN1-214ENST00000482733 PRDM1O75626 825 aa19.69■□□□□ 0.74
HMGN1-214ENST00000482733 HOXA7P31268 230 aaPredicted RBP19.69■□□□□ 0.74
HMGN1-214ENST00000482733 SP3Q02447 781 aa19.69■□□□□ 0.74
HMGN1-214ENST00000482733 CTDSPL2Q05D32 466 aa19.69■□□□□ 0.74
HMGN1-214ENST00000482733 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.69■□□□□ 0.74
HMGN1-214ENST00000482733 ZNF213O14771 459 aa19.68■□□□□ 0.74
HMGN1-214ENST00000482733 SGSM2O43147 1006 aa19.68■□□□□ 0.74
HMGN1-214ENST00000482733 ORC4O43929 436 aa19.68■□□□□ 0.74
HMGN1-214ENST00000482733 FGRP09769 529 aa19.68■□□□□ 0.74
HMGN1-214ENST00000482733 TSPY3P0CV98 308 aa19.68■□□□□ 0.74
HMGN1-214ENST00000482733 TSPY8P0CW00 308 aa19.68■□□□□ 0.74
HMGN1-214ENST00000482733 CYP2C8P10632 490 aa19.68■□□□□ 0.74
HMGN1-214ENST00000482733 NT5C2P49902 561 aa19.68■□□□□ 0.74
HMGN1-214ENST00000482733 DGKZQ13574 1117 aa19.68■□□□□ 0.74
HMGN1-214ENST00000482733 PPP4R3BQ5MIZ7 849 aa19.68■□□□□ 0.74
HMGN1-214ENST00000482733 C17orf99Q6UX52 265 aa19.68■□□□□ 0.74
HMGN1-214ENST00000482733 NEDD1Q8NHV4 660 aa19.68■□□□□ 0.74
HMGN1-214ENST00000482733 SMCR8Q8TEV9 937 aaPredicted RBP19.68■□□□□ 0.74
HMGN1-214ENST00000482733 ERO1AQ96HE7 468 aa19.68■□□□□ 0.74
HMGN1-214ENST00000482733 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.68■□□□□ 0.74
HMGN1-214ENST00000482733 RNF41Q9H4P4 317 aaPredicted RBP19.68■□□□□ 0.74
HMGN1-214ENST00000482733 TMX2Q9Y320 296 aa19.68■□□□□ 0.74
HMGN1-214ENST00000482733 A0A1W2PRG0 241 aa19.67■□□□□ 0.74
HMGN1-214ENST00000482733 EEF2P13639 858 aaKnown RBP19.67■□□□□ 0.74
HMGN1-214ENST00000482733 IRX3P78415 501 aaPredicted RBP19.67■□□□□ 0.74
HMGN1-214ENST00000482733 ARHGEF6Q15052 776 aa19.67■□□□□ 0.74
HMGN1-214ENST00000482733 ZYXQ15942 572 aaKnown RBP19.67■□□□□ 0.74
HMGN1-214ENST00000482733 IMMTQ16891 758 aaKnown RBP19.67■□□□□ 0.74
HMGN1-214ENST00000482733 SIAH1Q8IUQ4 282 aa19.67■□□□□ 0.74
HMGN1-214ENST00000482733 LPAR1Q92633 364 aa19.67■□□□□ 0.74
HMGN1-214ENST00000482733 IL25Q9H293 177 aa19.67■□□□□ 0.74
HMGN1-214ENST00000482733 NYAP2Q9P242 653 aa19.67■□□□□ 0.74
HMGN1-214ENST00000482733 ADGRA2Q96PE1 1338 aa19.67■□□□□ 0.74
HMGN1-214ENST00000482733 PLIN4Q96Q06 1357 aa19.67■□□□□ 0.74
HMGN1-214ENST00000482733 IGKV6D-41A0A0C4DH26 115 aa19.66■□□□□ 0.74
HMGN1-214ENST00000482733 USP17L15C9J2P7 530 aa19.66■□□□□ 0.74
HMGN1-214ENST00000482733 USP17L13C9JLJ4 530 aa19.66■□□□□ 0.74
HMGN1-214ENST00000482733 USP17L11C9JVI0 530 aa19.66■□□□□ 0.74
HMGN1-214ENST00000482733 USP17L18D6R9N7 530 aa19.66■□□□□ 0.74
HMGN1-214ENST00000482733 USP17L22D6RA61 530 aa19.66■□□□□ 0.74
HMGN1-214ENST00000482733 USP17L17D6RBQ6 530 aa19.66■□□□□ 0.74
HMGN1-214ENST00000482733 USP17L19D6RCP7 530 aa19.66■□□□□ 0.74
HMGN1-214ENST00000482733 USP17L20D6RJB6 530 aa19.66■□□□□ 0.74
HMGN1-214ENST00000482733 GCLCP48506 637 aaPredicted RBP19.66■□□□□ 0.74
HMGN1-214ENST00000482733 HAND2P61296 217 aa19.66■□□□□ 0.74
HMGN1-214ENST00000482733 TFAP4Q01664 338 aa19.66■□□□□ 0.74
HMGN1-214ENST00000482733 ATP2B2Q01814 1243 aa19.66■□□□□ 0.74
HMGN1-214ENST00000482733 USP17L24Q0WX57 530 aa19.66■□□□□ 0.74
HMGN1-214ENST00000482733 AKNAD1Q5T1N1 836 aa19.66■□□□□ 0.74
HMGN1-214ENST00000482733 CASC1Q6TDU7 716 aa19.66■□□□□ 0.74
HMGN1-214ENST00000482733 MFSD6Q6ZSS7 791 aa19.66■□□□□ 0.74
HMGN1-214ENST00000482733 CTU1Q7Z7A3 348 aaKnown RBP19.66■□□□□ 0.74
HMGN1-214ENST00000482733 ASCC2Q9H1I8 757 aaPredicted RBP19.66■□□□□ 0.74
HMGN1-214ENST00000482733 CPA4Q9UI42 421 aa19.66■□□□□ 0.74
HMGN1-214ENST00000482733 LOC285556D6RIA3 1793 aa19.65■□□□□ 0.74
HMGN1-214ENST00000482733 TSPY2A6NKD2 308 aa19.65■□□□□ 0.74
HMGN1-214ENST00000482733 VCAM1P19320 739 aa19.65■□□□□ 0.74
HMGN1-214ENST00000482733 KIF22Q14807 665 aa19.65■□□□□ 0.74
HMGN1-214ENST00000482733 CLEC10AQ8IUN9 316 aa19.65■□□□□ 0.74
HMGN1-214ENST00000482733 GTF3C2Q8WUA4 911 aaPredicted RBP19.65■□□□□ 0.74
HMGN1-214ENST00000482733 STAG1Q8WVM7 1258 aa19.65■□□□□ 0.74
HMGN1-214ENST00000482733 VCPKMTQ9H867 229 aa19.65■□□□□ 0.74
HMGN1-214ENST00000482733 GOPCQ9HD26 462 aa19.65■□□□□ 0.74
HMGN1-214ENST00000482733 TOMM22Q9NS69 142 aa19.65■□□□□ 0.74
HMGN1-214ENST00000482733 SYNPO2Q9UMS6 1093 aa19.65■□□□□ 0.74
HMGN1-214ENST00000482733 PTPRFP10586 1907 aa19.64■□□□□ 0.74
HMGN1-214ENST00000482733 RANBP6O60518 1105 aaKnown RBP19.64■□□□□ 0.73
HMGN1-214ENST00000482733 TTLL1O95922 423 aa19.64■□□□□ 0.73
HMGN1-214ENST00000482733 BCRP11274 1271 aa19.64■□□□□ 0.73
HMGN1-214ENST00000482733 FAM47AQ5JRC9 791 aa19.64■□□□□ 0.73
HMGN1-214ENST00000482733 KIAA1211Q6ZU35 1233 aa19.64■□□□□ 0.73
HMGN1-214ENST00000482733 MTMR4Q9NYA4 1195 aa19.64■□□□□ 0.73
HMGN1-214ENST00000482733 U3KPZ7 1027 aaPredicted RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms