RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 PTPRFP10586 1907 aa21.92■■□□□ 1.1
SMIM4-204ENST00000482728 AKR1B1P15121 316 aa21.92■■□□□ 1.1
SMIM4-204ENST00000482728 OSBPP22059 807 aa21.92■■□□□ 1.1
SMIM4-204ENST00000482728 USP14P54578 494 aa21.92■■□□□ 1.1
SMIM4-204ENST00000482728 PKN2Q16513 984 aaKnown RBP21.92■■□□□ 1.1
SMIM4-204ENST00000482728 C17orf99Q6UX52 265 aa21.92■■□□□ 1.1
SMIM4-204ENST00000482728 CD99L2Q8TCZ2 262 aa21.92■■□□□ 1.1
SMIM4-204ENST00000482728 CCDC136Q96JN2 1154 aa21.92■■□□□ 1.1
SMIM4-204ENST00000482728 GUCY1A2P33402 732 aa21.91■■□□□ 1.1
SMIM4-204ENST00000482728 ZYXQ15942 572 aaKnown RBP21.91■■□□□ 1.1
SMIM4-204ENST00000482728 CWC27Q6UX04 472 aaKnown RBP21.91■■□□□ 1.1
SMIM4-204ENST00000482728 ZNF444Q8N0Y2 327 aaPredicted RBP21.91■■□□□ 1.1
SMIM4-204ENST00000482728 ACER1Q8TDN7 264 aa21.91■■□□□ 1.1
SMIM4-204ENST00000482728 PDE4BQ07343 736 aa21.9■■□□□ 1.1
SMIM4-204ENST00000482728 VPS53Q5VIR6 699 aa21.9■■□□□ 1.1
SMIM4-204ENST00000482728 KIAA1683Q9H0B3 1180 aa21.9■■□□□ 1.1
SMIM4-204ENST00000482728 EFCC1Q9HA90 598 aa21.9■■□□□ 1.1
SMIM4-204ENST00000482728 EMILIN3Q9NT22 766 aa21.9■■□□□ 1.1
SMIM4-204ENST00000482728 TRIM17Q9Y577 477 aa21.9■■□□□ 1.1
SMIM4-204ENST00000482728 CCDC171Q6TFL3 1326 aa21.89■■□□□ 1.1
SMIM4-204ENST00000482728 MYH8P13535 1937 aa21.89■■□□□ 1.09
SMIM4-204ENST00000482728 IRX3P78415 501 aaPredicted RBP21.89■■□□□ 1.09
SMIM4-204ENST00000482728 PPARAQ07869 468 aa21.89■■□□□ 1.09
SMIM4-204ENST00000482728 ALX1Q15699 326 aa21.89■■□□□ 1.09
SMIM4-204ENST00000482728 ABHD8Q96I13 439 aa21.89■■□□□ 1.09
SMIM4-204ENST00000482728 ASCC2Q9H1I8 757 aaPredicted RBP21.89■■□□□ 1.09
SMIM4-204ENST00000482728 KANSL2Q9H9L4 492 aa21.89■■□□□ 1.09
SMIM4-204ENST00000482728 ARHGEF10LQ9HCE6 1279 aa21.89■■□□□ 1.09
SMIM4-204ENST00000482728 HOXA7P31268 230 aaPredicted RBP21.88■■□□□ 1.09
SMIM4-204ENST00000482728 ATP2B2Q01814 1243 aa21.88■■□□□ 1.09
SMIM4-204ENST00000482728 ICA1Q05084 483 aa21.88■■□□□ 1.09
SMIM4-204ENST00000482728 ZNF589Q86UQ0 364 aaPredicted RBP21.88■■□□□ 1.09
SMIM4-204ENST00000482728 SH2D4AQ9H788 454 aa21.88■■□□□ 1.09
SMIM4-204ENST00000482728 ROBO3Q96MS0 1386 aa21.87■■□□□ 1.09
SMIM4-204ENST00000482728 ADGRA2Q96PE1 1338 aa21.87■■□□□ 1.09
SMIM4-204ENST00000482728 FOXP2O15409 715 aa21.87■■□□□ 1.09
SMIM4-204ENST00000482728 PRDM1O75626 825 aa21.87■■□□□ 1.09
SMIM4-204ENST00000482728 FGAP02671 866 aa21.87■■□□□ 1.09
SMIM4-204ENST00000482728 HSPD1P10809 573 aaKnown RBP21.87■■□□□ 1.09
SMIM4-204ENST00000482728 GSPT1P15170 499 aaKnown RBP21.87■■□□□ 1.09
SMIM4-204ENST00000482728 RASA1P20936 1047 aa21.87■■□□□ 1.09
SMIM4-204ENST00000482728 GCLCP48506 637 aaPredicted RBP21.87■■□□□ 1.09
SMIM4-204ENST00000482728 LACTBP83111 547 aaPredicted RBP21.87■■□□□ 1.09
SMIM4-204ENST00000482728 IFFO2Q5TF58 517 aa21.87■■□□□ 1.09
SMIM4-204ENST00000482728 OTOP1Q7RTM1 612 aa21.87■■□□□ 1.09
SMIM4-204ENST00000482728 ECM2O94769 699 aaPredicted RBP21.86■■□□□ 1.09
SMIM4-204ENST00000482728 BCRP11274 1271 aa21.86■■□□□ 1.09
SMIM4-204ENST00000482728 C12orf42Q96LP6 360 aa21.86■■□□□ 1.09
SMIM4-204ENST00000482728 A0A1W2PRG0 241 aa21.85■■□□□ 1.09
SMIM4-204ENST00000482728 USP17L15C9J2P7 530 aa21.85■■□□□ 1.09
SMIM4-204ENST00000482728 USP17L13C9JLJ4 530 aa21.85■■□□□ 1.09
SMIM4-204ENST00000482728 USP17L11C9JVI0 530 aa21.85■■□□□ 1.09
SMIM4-204ENST00000482728 USP17L18D6R9N7 530 aa21.85■■□□□ 1.09
SMIM4-204ENST00000482728 USP17L22D6RA61 530 aa21.85■■□□□ 1.09
SMIM4-204ENST00000482728 USP17L17D6RBQ6 530 aa21.85■■□□□ 1.09
SMIM4-204ENST00000482728 USP17L19D6RCP7 530 aa21.85■■□□□ 1.09
SMIM4-204ENST00000482728 USP17L20D6RJB6 530 aa21.85■■□□□ 1.09
SMIM4-204ENST00000482728 CAPN15O75808 1086 aa21.85■■□□□ 1.09
SMIM4-204ENST00000482728 USP17L24Q0WX57 530 aa21.85■■□□□ 1.09
SMIM4-204ENST00000482728 FBXO46Q6PJ61 603 aaPredicted RBP21.85■■□□□ 1.09
SMIM4-204ENST00000482728 CLEC10AQ8IUN9 316 aa21.85■■□□□ 1.09
SMIM4-204ENST00000482728 P2RX7Q99572 595 aaKnown RBP21.85■■□□□ 1.09
SMIM4-204ENST00000482728 FMNL1O95466 1100 aaPredicted RBP21.84■■□□□ 1.09
SMIM4-204ENST00000482728 EEF2P13639 858 aaKnown RBP21.84■■□□□ 1.09
SMIM4-204ENST00000482728 PSMC4P43686 418 aa21.84■■□□□ 1.09
SMIM4-204ENST00000482728 CTDSPL2Q05D32 466 aa21.84■■□□□ 1.09
SMIM4-204ENST00000482728 SIAH1Q8IUQ4 282 aa21.84■■□□□ 1.09
SMIM4-204ENST00000482728 ANKRD13CQ8N6S4 541 aa21.84■■□□□ 1.09
SMIM4-204ENST00000482728 RUFY2Q8WXA3 655 aa21.84■■□□□ 1.09
SMIM4-204ENST00000482728 TMX2Q9Y320 296 aa21.84■■□□□ 1.09
SMIM4-204ENST00000482728 GNRH1P01148 92 aa21.83■■□□□ 1.09
SMIM4-204ENST00000482728 TSPY3P0CV98 308 aa21.83■■□□□ 1.09
SMIM4-204ENST00000482728 TSPY8P0CW00 308 aa21.83■■□□□ 1.09
SMIM4-204ENST00000482728 VCAM1P19320 739 aa21.83■■□□□ 1.09
SMIM4-204ENST00000482728 HOXD10P28358 340 aa21.83■■□□□ 1.09
SMIM4-204ENST00000482728 ARHGAP39Q9C0H5 1083 aa21.83■■□□□ 1.09
SMIM4-204ENST00000482728 ANAPC4Q9UJX5 808 aa21.83■■□□□ 1.09
SMIM4-204ENST00000482728 LOC285556D6RIA3 1793 aa21.83■■□□□ 1.09
SMIM4-204ENST00000482728 CCDC85CA6NKD9 419 aa21.82■■□□□ 1.08
SMIM4-204ENST00000482728 HERVK_113P62684 666 aa21.82■■□□□ 1.08
SMIM4-204ENST00000482728 TFAP4Q01664 338 aa21.82■■□□□ 1.08
SMIM4-204ENST00000482728 LPAR1Q92633 364 aa21.82■■□□□ 1.08
SMIM4-204ENST00000482728 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.82■■□□□ 1.08
SMIM4-204ENST00000482728 RPAP3Q9H6T3 665 aaPredicted RBP21.82■■□□□ 1.08
SMIM4-204ENST00000482728 PTPN22Q9Y2R2 807 aa21.82■■□□□ 1.08
SMIM4-204ENST00000482728 RAD21O60216 631 aa21.81■■□□□ 1.08
SMIM4-204ENST00000482728 CHMLP26374 656 aa21.81■■□□□ 1.08
SMIM4-204ENST00000482728 FCGRTP55899 365 aa21.81■■□□□ 1.08
SMIM4-204ENST00000482728 CAP1Q01518 475 aa21.81■■□□□ 1.08
SMIM4-204ENST00000482728 FAM110CQ1W6H9 321 aa21.81■■□□□ 1.08
SMIM4-204ENST00000482728 CATSPERGQ6ZRH7 1159 aa21.81■■□□□ 1.08
SMIM4-204ENST00000482728 NEDD1Q8NHV4 660 aa21.81■■□□□ 1.08
SMIM4-204ENST00000482728 GTF3C2Q8WUA4 911 aaPredicted RBP21.81■■□□□ 1.08
SMIM4-204ENST00000482728 TRIM47Q96LD4 638 aa21.81■■□□□ 1.08
SMIM4-204ENST00000482728 VCPKMTQ9H867 229 aa21.81■■□□□ 1.08
SMIM4-204ENST00000482728 GOPCQ9HD26 462 aa21.81■■□□□ 1.08
SMIM4-204ENST00000482728 TOMM22Q9NS69 142 aa21.81■■□□□ 1.08
SMIM4-204ENST00000482728 HPS5Q9UPZ3 1129 aa21.81■■□□□ 1.08
SMIM4-204ENST00000482728 ZMYM6O95789 1325 aa21.8■■□□□ 1.08
SMIM4-204ENST00000482728 RANBP6O60518 1105 aaKnown RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms