RNA–Protein interactions for RNA: ENST00000482687.5

APTX-225, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-225ENST00000482687 MTMR6Q9Y217 621 aa12.06□□□□□ -0.48
APTX-225ENST00000482687 SLC12A7Q9Y666 1083 aa12.06□□□□□ -0.48
APTX-225ENST00000482687 MYH8P13535 1937 aa12.06□□□□□ -0.48
APTX-225ENST00000482687 TCHHQ07283 1943 aa12.06□□□□□ -0.48
APTX-225ENST00000482687 ORC4O43929 436 aa12.06□□□□□ -0.48
APTX-225ENST00000482687 ZSCAN22P10073 491 aaPredicted RBP12.06□□□□□ -0.48
APTX-225ENST00000482687 LIFRP42702 1097 aa12.06□□□□□ -0.48
APTX-225ENST00000482687 PRELPP51888 382 aa12.06□□□□□ -0.48
APTX-225ENST00000482687 SEC23AQ15436 765 aa12.06□□□□□ -0.48
APTX-225ENST00000482687 CDC37L1Q7L3B6 337 aa12.06□□□□□ -0.48
APTX-225ENST00000482687 PRMT6Q96LA8 375 aaPredicted RBP12.06□□□□□ -0.48
APTX-225ENST00000482687 TDRD3Q9H7E2 651 aaKnown RBP12.06□□□□□ -0.48
APTX-225ENST00000482687 ARFGEF1Q9Y6D6 1849 aa12.05□□□□□ -0.48
APTX-225ENST00000482687 VGLL3A8MV65 326 aa12.05□□□□□ -0.48
APTX-225ENST00000482687 TULP2O00295 520 aa12.05□□□□□ -0.48
APTX-225ENST00000482687 VIL1P09327 827 aaKnown RBP12.05□□□□□ -0.48
APTX-225ENST00000482687 CDK8P49336 464 aa12.05□□□□□ -0.48
APTX-225ENST00000482687 GUCY1B3Q02153 619 aa12.05□□□□□ -0.48
APTX-225ENST00000482687 CXCL9Q07325 125 aa12.05□□□□□ -0.48
APTX-225ENST00000482687 SYNE3Q6ZMZ3 975 aa12.05□□□□□ -0.48
APTX-225ENST00000482687 FERMT3Q86UX7 667 aa12.05□□□□□ -0.48
APTX-225ENST00000482687 SGMS1Q86VZ5 419 aa12.05□□□□□ -0.48
APTX-225ENST00000482687 CMTR1Q8N1G2 835 aaKnown RBP12.05□□□□□ -0.48
APTX-225ENST00000482687 LLPHQ9BRT6 129 aaKnown RBP12.05□□□□□ -0.48
APTX-225ENST00000482687 MORC2Q9Y6X9 1032 aaPredicted RBP12.05□□□□□ -0.48
APTX-225ENST00000482687 ROBO3Q96MS0 1386 aa12.04□□□□□ -0.48
APTX-225ENST00000482687 SHTN1A0MZ66 631 aa12.04□□□□□ -0.48
APTX-225ENST00000482687 CPLX1O14810 134 aa12.04□□□□□ -0.48
APTX-225ENST00000482687 FDPSP14324 419 aaKnown RBP12.04□□□□□ -0.48
APTX-225ENST00000482687 IFIT1BQ5T764 474 aaKnown RBP12.04□□□□□ -0.48
APTX-225ENST00000482687 IQCA1Q86XH1 822 aa12.04□□□□□ -0.48
APTX-225ENST00000482687 ZNF654Q8IZM8 581 aa12.04□□□□□ -0.48
APTX-225ENST00000482687 ZNF444Q8N0Y2 327 aaPredicted RBP12.04□□□□□ -0.48
APTX-225ENST00000482687 PHKBQ93100 1093 aa12.04□□□□□ -0.48
APTX-225ENST00000482687 FHDC1Q9C0D6 1143 aaPredicted RBP12.04□□□□□ -0.48
APTX-225ENST00000482687 OSBPL5Q9H0X9 879 aaPredicted RBP12.04□□□□□ -0.48
APTX-225ENST00000482687 FAM217BQ9NTX9 383 aaPredicted RBP12.04□□□□□ -0.48
APTX-225ENST00000482687 CALCOCO1Q9P1Z2 691 aa12.04□□□□□ -0.48
APTX-225ENST00000482687 DDX41Q9UJV9 622 aaKnown RBP12.04□□□□□ -0.48
APTX-225ENST00000482687 SERPINA10Q9UK55 444 aa12.04□□□□□ -0.48
APTX-225ENST00000482687 RIOK3O14730 519 aaKnown RBP12.04□□□□□ -0.48
APTX-225ENST00000482687 F13A1P00488 732 aa12.04□□□□□ -0.48
APTX-225ENST00000482687 PCP11498 1178 aaKnown RBP12.04□□□□□ -0.48
APTX-225ENST00000482687 RASA1P20936 1047 aa12.04□□□□□ -0.48
APTX-225ENST00000482687 HDLBPQ00341 1268 aaKnown RBP12.04□□□□□ -0.48
APTX-225ENST00000482687 C16orf86Q6ZW13 317 aa12.04□□□□□ -0.48
APTX-225ENST00000482687 CCDC82Q8N4S0 544 aa12.04□□□□□ -0.48
APTX-225ENST00000482687 JDP2Q8WYK2 163 aa12.04□□□□□ -0.48
APTX-225ENST00000482687 IL17RBQ9NRM6 502 aa12.04□□□□□ -0.48
APTX-225ENST00000482687 GJB4Q9NTQ9 266 aa12.04□□□□□ -0.48
APTX-225ENST00000482687 FAM198AQ9UFP1 575 aa12.04□□□□□ -0.48
APTX-225ENST00000482687 MTMR7Q9Y216 660 aa12.04□□□□□ -0.48
APTX-225ENST00000482687 CLRN2A0PK11 232 aa12.03□□□□□ -0.48
APTX-225ENST00000482687 FAM196BA6NMK8 535 aa12.03□□□□□ -0.48
APTX-225ENST00000482687 UBE2Q2LH0YL09 131 aa12.03□□□□□ -0.48
APTX-225ENST00000482687 H3BQV1 296 aa12.03□□□□□ -0.48
APTX-225ENST00000482687 TSPY3P0CV98 308 aa12.03□□□□□ -0.48
APTX-225ENST00000482687 TSPY8P0CW00 308 aa12.03□□□□□ -0.48
APTX-225ENST00000482687 TPRNQ4KMQ1 711 aa12.03□□□□□ -0.48
APTX-225ENST00000482687 IFFO2Q5TF58 517 aa12.03□□□□□ -0.48
APTX-225ENST00000482687 OTUD7BQ6GQQ9 843 aa12.03□□□□□ -0.48
APTX-225ENST00000482687 FAM173BQ6P4H8 233 aa12.03□□□□□ -0.48
APTX-225ENST00000482687 GMLQ99445 158 aa12.03□□□□□ -0.48
APTX-225ENST00000482687 MRIQ9BWK5 157 aa12.03□□□□□ -0.48
APTX-225ENST00000482687 VPS33BQ9H267 617 aa12.03□□□□□ -0.48
APTX-225ENST00000482687 GDPD2Q9HCC8 539 aa12.03□□□□□ -0.48
APTX-225ENST00000482687 ORC3Q9UBD5 711 aaPredicted RBP12.03□□□□□ -0.48
APTX-225ENST00000482687 SIPA1L1O43166 1804 aa12.03□□□□□ -0.48
APTX-225ENST00000482687 RTN1Q16799 776 aa12.02□□□□□ -0.48
APTX-225ENST00000482687 CIAPIN1Q6FI81 312 aa12.02□□□□□ -0.48
APTX-225ENST00000482687 ARHGAP27Q6ZUM4 889 aa12.02□□□□□ -0.48
APTX-225ENST00000482687 TEX2Q8IWB9 1127 aa12.02□□□□□ -0.48
APTX-225ENST00000482687 ZSCAN29Q8IWY8 852 aaPredicted RBP12.02□□□□□ -0.48
APTX-225ENST00000482687 KIAA1524Q8TCG1 905 aa12.02□□□□□ -0.48
APTX-225ENST00000482687 AIFM3Q96NN9 605 aa12.02□□□□□ -0.48
APTX-225ENST00000482687 GJA3Q9Y6H8 435 aa12.02□□□□□ -0.48
APTX-225ENST00000482687 MYH6P13533 1939 aa12.02□□□□□ -0.49
APTX-225ENST00000482687 DDTLA6NHG4 134 aaPredicted RBP12.02□□□□□ -0.49
APTX-225ENST00000482687 TCP10L2B9ZVM9 353 aa12.02□□□□□ -0.49
APTX-225ENST00000482687 DHX16O60231 1041 aaKnown RBP12.02□□□□□ -0.49
APTX-225ENST00000482687 CHRM1P11229 460 aaPredicted RBP12.02□□□□□ -0.49
APTX-225ENST00000482687 PDCP20941 246 aa12.02□□□□□ -0.49
APTX-225ENST00000482687 DLGAP5Q15398 846 aa12.02□□□□□ -0.49
APTX-225ENST00000482687 TERF2Q15554 542 aa12.02□□□□□ -0.49
APTX-225ENST00000482687 RBM26Q5T8P6 1007 aaKnown RBP12.02□□□□□ -0.49
APTX-225ENST00000482687 RCSD1Q6JBY9 416 aa12.02□□□□□ -0.49
APTX-225ENST00000482687 SH3BP5LQ7L8J4 393 aa12.02□□□□□ -0.49
APTX-225ENST00000482687 CATIPQ7Z7H3 387 aa12.02□□□□□ -0.49
APTX-225ENST00000482687 TTC6Q86TZ1 520 aa12.02□□□□□ -0.49
APTX-225ENST00000482687 TMTC2Q8N394 836 aa12.02□□□□□ -0.49
APTX-225ENST00000482687 RNF214Q8ND24 703 aa12.02□□□□□ -0.49
APTX-225ENST00000482687 MTA3Q9BTC8 594 aa12.02□□□□□ -0.49
APTX-225ENST00000482687 SLC26A6Q9BXS9 759 aa12.02□□□□□ -0.49
APTX-225ENST00000482687 HDAC9Q9UKV0 1011 aa12.02□□□□□ -0.49
APTX-225ENST00000482687 SCAF8Q9UPN6 1271 aaKnown RBP12.02□□□□□ -0.49
APTX-225ENST00000482687 CNPY2Q9Y2B0 182 aa12.02□□□□□ -0.49
APTX-225ENST00000482687 MYO3BQ8WXR4 1341 aa12.01□□□□□ -0.49
APTX-225ENST00000482687 NCBP1Q09161 790 aaKnown RBP12.01□□□□□ -0.49
APTX-225ENST00000482687 NTRK3Q16288 839 aa12.01□□□□□ -0.49
APTX-225ENST00000482687 FANCBQ8NB91 859 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms